data_1LLC # _model_server_result.job_id 4HKpmG7XYiMwGNzGgp-EMQ _model_server_result.datetime_utc '2024-12-27 00:11:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1llc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 1LLC # _exptl.entry_id 1LLC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,6-di-O-phosphono-alpha-D-fructofuranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.3 _cell.angle_gamma 90 _cell.entry_id 1LLC _cell.length_a 169.2 _cell.length_b 85.38 _cell.length_c 180.18 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LLC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 'complete point assembly' 1 ? tetrameric 4 'complete point assembly' 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2,3,4 A,B,C 2 5,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'point symmetry operation' ? ? -0.396027 0 0.918164 0 -1 0 0.918314 0 0.396027 0 0 0 4 'point symmetry operation' ? ? 0.396027 0 -0.918164 0 -1 0 -0.918314 0 -0.396027 0 0 0 5 'point symmetry operation' ? ? -0.592645 0.80489 -0.03115 -0.805415 -0.591769 0.032558 0.007735 0.044493 0.998973 43.18003 12.07871 121.07681 6 'point symmetry operation' ? ? 0.592645 0.80489 0.03115 0.805415 -0.591769 -0.032558 -0.007735 0.044493 -0.998973 43.18003 12.07871 121.07681 7 'point symmetry operation' ? ? -0.206098 -0.80489 0.556481 -0.348864 0.591769 0.726609 -0.914307 -0.044493 -0.402722 43.18003 12.07871 121.07681 8 'point symmetry operation' ? ? 0.206098 -0.80489 -0.556481 0.348864 0.591769 -0.726609 0.914307 -0.044493 0.402722 43.18003 12.07871 121.07681 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id AFP _chem_comp.mon_nstd_flag n _chem_comp.name 1,6-di-O-phosphono-alpha-D-fructofuranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms 'ALPHA FRUCTOSE 1,6-DIPHOSPHATE;1,6-di-O-phosphono-alpha-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P AFP doub 1 n n P1 O2P AFP sing 2 n n P1 O3P AFP sing 3 n n P1 O1 AFP sing 4 n n O2P HOP2 AFP sing 5 n n O3P HOP3 AFP sing 6 n n O1 C1 AFP sing 7 n n C1 C2 AFP sing 8 n n C1 H11 AFP sing 9 n n C1 H12 AFP sing 10 n n C2 O2 AFP sing 11 n n C2 C3 AFP sing 12 n n C2 O5 AFP sing 13 n n O2 HO2 AFP sing 14 n n C3 O3 AFP sing 15 n n C3 C4 AFP sing 16 n n C3 H3 AFP sing 17 n n O3 HO3 AFP sing 18 n n C4 O4 AFP sing 19 n n C4 C5 AFP sing 20 n n C4 H4 AFP sing 21 n n O4 HO4 AFP sing 22 n n C5 O5 AFP sing 23 n n C5 C6 AFP sing 24 n n C5 H5 AFP sing 25 n n C6 O6 AFP sing 26 n n C6 H61 AFP sing 27 n n C6 H62 AFP sing 28 n n O6 P6 AFP sing 29 n n P6 O4P AFP doub 30 n n P6 O5P AFP sing 31 n n P6 O6P AFP sing 32 n n O5P HOP5 AFP sing 33 n n O6P HOP6 AFP sing 34 n n # _pdbx_chem_comp_identifier.comp_id AFP _pdbx_chem_comp_identifier.identifier a-D-Fruf1PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1LLC _atom_sites.fract_transf_matrix[1][1] 0.00591 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000134 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011712 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AFP A 1 1 1 AFP FBP . C 3 SO4 A 1 2 2 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 AFP . . . B 2 12.63 2.758 15.624 1 15 ? P1 AFP 1 A 1 HETATM 2 O O1P AFP . . . B 2 11.484 1.979 14.946 1 15 ? O1P AFP 1 A 1 HETATM 3 O O2P AFP . . . B 2 13.212 1.93 16.786 1 15 ? O2P AFP 1 A 1 HETATM 4 O O3P AFP . . . B 2 12.026 4.143 16.222 1 15 ? O3P AFP 1 A 1 HETATM 5 O O1 AFP . . . B 2 13.954 3.057 14.387 1 15 ? O1 AFP 1 A 1 HETATM 6 C C1 AFP . . . B 2 15.218 2.066 13.974 1 15 ? C1 AFP 1 A 1 HETATM 7 C C2 AFP . . . B 2 16.209 2.442 12.611 1 15 ? C2 AFP 1 A 1 HETATM 8 O O2 AFP . . . B 2 17.448 3.074 12.992 1 15 ? O2 AFP 1 A 1 HETATM 9 C C3 AFP . . . B 2 16.66 1.229 11.708 1 15 ? C3 AFP 1 A 1 HETATM 10 O O3 AFP . . . B 2 16.664 -0.002 12.454 1 15 ? O3 AFP 1 A 1 HETATM 11 C C4 AFP . . . B 2 15.616 1.201 10.583 1 15 ? C4 AFP 1 A 1 HETATM 12 O O4 AFP . . . B 2 15.992 0.489 9.388 1 15 ? O4 AFP 1 A 1 HETATM 13 C C5 AFP . . . B 2 15.516 2.684 10.377 1 15 ? C5 AFP 1 A 1 HETATM 14 O O5 AFP . . . B 2 15.63 3.309 11.689 1 15 ? O5 AFP 1 A 1 HETATM 15 C C6 AFP . . . B 2 14.255 3.193 9.786 1 15 ? C6 AFP 1 A 1 HETATM 16 O O6 AFP . . . B 2 13.842 4.338 10.531 1 15 ? O6 AFP 1 A 1 HETATM 17 P P6 AFP . . . B 2 12.388 4.883 10.322 1 15 ? P6 AFP 1 A 1 HETATM 18 O O4P AFP . . . B 2 11.891 4.459 8.929 1 15 ? O4P AFP 1 A 1 HETATM 19 O O5P AFP . . . B 2 12.411 6.419 10.43 1 15 ? O5P AFP 1 A 1 HETATM 20 O O6P AFP . . . B 2 11.472 4.294 11.411 1 15 ? O6P AFP 1 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #