data_1LLW # _model_server_result.job_id 4j5R0VZHiPEz4_5f6JgR8A _model_server_result.datetime_utc '2024-11-05 19:32:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1llw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2070}' # _entry.id 1LLW # _exptl.entry_id 1LLW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LLW _cell.length_a 166.521 _cell.length_b 166.521 _cell.length_c 219.874 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LLW _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 1137 A CYS 1137 1_555 C FE1 F3S . A F3S 2072 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.7 ? metalc ? metalc2 A SG CYS 1143 A CYS 1143 1_555 C FE4 F3S . A F3S 2072 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc3 A SG CYS 1148 A CYS 1148 1_555 C FE3 F3S . A F3S 2072 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 107 n n N1 C10 FMN doub 108 n n C2 O2 FMN doub 109 n n C2 N3 FMN sing 110 n n N3 C4 FMN sing 111 n n N3 HN3 FMN sing 112 n n C4 O4 FMN doub 113 n n C4 C4A FMN sing 114 n n C4A N5 FMN doub 115 n n C4A C10 FMN sing 116 n n N5 C5A FMN sing 117 n n C5A C6 FMN doub 118 n y C5A C9A FMN sing 119 n y C6 C7 FMN sing 120 n y C6 H6 FMN sing 121 n n C7 C7M FMN sing 122 n n C7 C8 FMN doub 123 n y C7M HM71 FMN sing 124 n n C7M HM72 FMN sing 125 n n C7M HM73 FMN sing 126 n n C8 C8M FMN sing 127 n n C8 C9 FMN sing 128 n y C8M HM81 FMN sing 129 n n C8M HM82 FMN sing 130 n n C8M HM83 FMN sing 131 n n C9 C9A FMN doub 132 n y C9 H9 FMN sing 133 n n C9A N10 FMN sing 134 n n N10 C10 FMN sing 135 n n N10 C1' FMN sing 136 n n C1' C2' FMN sing 137 n n C1' "H1'1" FMN sing 138 n n C1' "H1'2" FMN sing 139 n n C2' O2' FMN sing 140 n n C2' C3' FMN sing 141 n n C2' H2' FMN sing 142 n n O2' HO2' FMN sing 143 n n C3' O3' FMN sing 144 n n C3' C4' FMN sing 145 n n C3' H3' FMN sing 146 n n O3' HO3' FMN sing 147 n n C4' O4' FMN sing 148 n n C4' C5' FMN sing 149 n n C4' H4' FMN sing 150 n n O4' HO4' FMN sing 151 n n C5' O5' FMN sing 152 n n C5' "H5'1" FMN sing 153 n n C5' "H5'2" FMN sing 154 n n O5' P FMN sing 155 n n P O1P FMN doub 156 n n P O2P FMN sing 157 n n P O3P FMN sing 158 n n O2P HOP2 FMN sing 159 n n O3P HOP3 FMN sing 160 n n # _atom_sites.entry_id 1LLW _atom_sites.fract_transf_matrix[1][1] 0.006005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004548 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 2070 70 FMN FMN . C 3 F3S A 1 2072 72 F3S F3S . D 4 AKG A 1 2073 73 AKG 2OG . E 5 HOH A 1 2074 1 HOH HOH . E 5 HOH A 2 2075 2 HOH HOH . E 5 HOH A 3 2076 3 HOH HOH . E 5 HOH A 4 2077 4 HOH HOH . E 5 HOH A 5 2078 5 HOH HOH . E 5 HOH A 6 2079 6 HOH HOH . E 5 HOH A 7 2080 7 HOH HOH . E 5 HOH A 8 2081 8 HOH HOH . E 5 HOH A 9 2082 9 HOH HOH . E 5 HOH A 10 2083 10 HOH HOH . E 5 HOH A 11 2084 11 HOH HOH . E 5 HOH A 12 2085 12 HOH HOH . E 5 HOH A 13 2086 13 HOH HOH . E 5 HOH A 14 2087 14 HOH HOH . E 5 HOH A 15 2088 15 HOH HOH . E 5 HOH A 16 2089 16 HOH HOH . E 5 HOH A 17 2090 17 HOH HOH . E 5 HOH A 18 2091 18 HOH HOH . E 5 HOH A 19 2092 19 HOH HOH . E 5 HOH A 20 2093 20 HOH HOH . E 5 HOH A 21 2094 21 HOH HOH . E 5 HOH A 22 2095 22 HOH HOH . E 5 HOH A 23 2096 23 HOH HOH . E 5 HOH A 24 2097 24 HOH HOH . E 5 HOH A 25 2098 25 HOH HOH . E 5 HOH A 26 2099 26 HOH HOH . E 5 HOH A 27 2100 27 HOH HOH . E 5 HOH A 28 2101 28 HOH HOH . E 5 HOH A 29 2102 29 HOH HOH . E 5 HOH A 30 2103 30 HOH HOH . E 5 HOH A 31 2104 31 HOH HOH . E 5 HOH A 32 2105 32 HOH HOH . E 5 HOH A 33 2106 33 HOH HOH . E 5 HOH A 34 2107 34 HOH HOH . E 5 HOH A 35 2108 35 HOH HOH . E 5 HOH A 36 2109 36 HOH HOH . E 5 HOH A 37 2110 37 HOH HOH . E 5 HOH A 38 2111 38 HOH HOH . E 5 HOH A 39 2112 39 HOH HOH . E 5 HOH A 40 2113 40 HOH HOH . E 5 HOH A 41 2114 41 HOH HOH . E 5 HOH A 42 2115 42 HOH HOH . E 5 HOH A 43 2116 43 HOH HOH . E 5 HOH A 44 2117 44 HOH HOH . E 5 HOH A 45 2118 45 HOH HOH . E 5 HOH A 46 2119 46 HOH HOH . E 5 HOH A 47 2120 47 HOH HOH . E 5 HOH A 48 2121 48 HOH HOH . E 5 HOH A 49 2122 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 182.502 225.32 29.984 1 85.65 ? N1 FMN 2070 A 1 HETATM 2 C C2 FMN . . . B 2 182.382 225.98 28.807 1 84.95 ? C2 FMN 2070 A 1 HETATM 3 O O2 FMN . . . B 2 182.907 225.529 27.816 1 85.93 ? O2 FMN 2070 A 1 HETATM 4 N N3 FMN . . . B 2 181.671 227.147 28.762 1 87.81 ? N3 FMN 2070 A 1 HETATM 5 C C4 FMN . . . B 2 181.057 227.653 29.902 1 88.56 ? C4 FMN 2070 A 1 HETATM 6 O O4 FMN . . . B 2 180.628 228.813 29.891 1 88.1 ? O4 FMN 2070 A 1 HETATM 7 C C4A FMN . . . B 2 181.184 226.96 31.105 1 86.23 ? C4A FMN 2070 A 1 HETATM 8 N N5 FMN . . . B 2 180.623 227.419 32.271 1 85.32 ? N5 FMN 2070 A 1 HETATM 9 C C5A FMN . . . B 2 180.804 226.703 33.431 1 86.02 ? C5A FMN 2070 A 1 HETATM 10 C C6 FMN . . . B 2 180.244 227.158 34.616 1 87.64 ? C6 FMN 2070 A 1 HETATM 11 C C7 FMN . . . B 2 180.408 226.451 35.8 1 87.56 ? C7 FMN 2070 A 1 HETATM 12 C C7M FMN . . . B 2 179.94 227.073 37.066 1 86.53 ? C7M FMN 2070 A 1 HETATM 13 C C8 FMN . . . B 2 181.15 225.284 35.816 1 87.62 ? C8 FMN 2070 A 1 HETATM 14 C C8M FMN . . . B 2 181.604 224.742 37.126 1 88.02 ? C8M FMN 2070 A 1 HETATM 15 C C9 FMN . . . B 2 181.721 224.831 34.633 1 87.12 ? C9 FMN 2070 A 1 HETATM 16 C C9A FMN . . . B 2 181.542 225.53 33.436 1 85.74 ? C9A FMN 2070 A 1 HETATM 17 N N10 FMN . . . B 2 182.106 225.113 32.257 1 83.58 ? N10 FMN 2070 A 1 HETATM 18 C C10 FMN . . . B 2 181.917 225.8 31.117 1 84.44 ? C10 FMN 2070 A 1 HETATM 19 C C1' FMN . . . B 2 183.166 224.08 32.209 1 85.77 ? C1' FMN 2070 A 1 HETATM 20 C C2' FMN . . . B 2 184.599 224.572 32.336 1 83.39 ? C2' FMN 2070 A 1 HETATM 21 O O2' FMN . . . B 2 184.973 225.319 31.23 1 81.4 ? O2' FMN 2070 A 1 HETATM 22 C C3' FMN . . . B 2 185.519 223.38 32.413 1 82.62 ? C3' FMN 2070 A 1 HETATM 23 O O3' FMN . . . B 2 185.386 222.678 31.214 1 80.24 ? O3' FMN 2070 A 1 HETATM 24 C C4' FMN . . . B 2 185.142 222.478 33.581 1 84.3 ? C4' FMN 2070 A 1 HETATM 25 O O4' FMN . . . B 2 184.567 223.221 34.62 1 85.47 ? O4' FMN 2070 A 1 HETATM 26 C C5' FMN . . . B 2 186.335 221.731 34.137 1 85.14 ? C5' FMN 2070 A 1 HETATM 27 O O5' FMN . . . B 2 185.944 220.615 34.889 1 84.35 ? O5' FMN 2070 A 1 HETATM 28 P P FMN . . . B 2 186.116 220.623 36.453 1 80.9 ? P FMN 2070 A 1 HETATM 29 O O1P FMN . . . B 2 186.106 219.241 36.917 1 80.12 ? O1P FMN 2070 A 1 HETATM 30 O O2P FMN . . . B 2 184.976 221.462 37.028 1 83.3 ? O2P FMN 2070 A 1 HETATM 31 O O3P FMN . . . B 2 187.449 221.269 36.766 1 84.75 ? O3P FMN 2070 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #