data_1LM2
#
_model_server_result.job_id            zqdEGfk2HghhR5O-sUUC6w 
_model_server_result.datetime_utc      '2024-11-04 23:07:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lm2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":128}' 
#
_entry.id    1LM2 
#
_exptl.entry_id    1LM2 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME C' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 26 A CYS 26 1_555 C CAB HEC . A HEC 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? 
covale ? covale2 A SG CYS 49 A CYS 49 1_555 D CAB HEC . A HEC 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
covale ? covale3 A SG CYS 52 A CYS 52 1_555 D CAC HEC . A HEC 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.837 ? 
covale ? covale4 A SG CYS 62 A CYS 62 1_555 E CAB HEC . A HEC 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
covale ? covale5 A SG CYS 65 A CYS 65 1_555 E CAC HEC . A HEC 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? 
metalc ? metalc1 A NE2 HIS 17 A HIS 17 1_555 C FE HEC . A HEC 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc2 A NE2 HIS 20 A HIS 20 1_555 D FE HEC . A HEC 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc3 A NE2 HIS 30 A HIS 30 1_555 C FE HEC . A HEC 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
metalc ? metalc4 A NE2 HIS 45 A HIS 45 1_555 E FE HEC . A HEC 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc5 A NE2 HIS 53 A HIS 53 1_555 D FE HEC . A HEC 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc6 A NE2 HIS 66 A HIS 66 1_555 E FE HEC . A HEC 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HEC sing 84 n n 
FE NB HEC sing 85 n n 
FE NC HEC sing 86 n n 
FE ND HEC sing 87 n n 
CHA C1A HEC doub 88 n n 
CHA C4D HEC sing 89 n n 
CHA HHA HEC sing 90 n n 
CHB C4A HEC doub 91 n n 
CHB C1B HEC sing 92 n n 
CHB HHB HEC sing 93 n n 
CHC C4B HEC doub 94 n n 
CHC C1C HEC sing 95 n n 
CHC HHC HEC sing 96 n n 
CHD C4C HEC doub 97 n n 
CHD C1D HEC sing 98 n n 
CHD HHD HEC sing 99 n n 
NA C1A HEC sing 100 n y 
NA C4A HEC sing 101 n y 
C1A C2A HEC sing 102 n y 
C2A C3A HEC doub 103 n y 
C2A CAA HEC sing 104 n n 
C3A C4A HEC sing 105 n y 
C3A CMA HEC sing 106 n n 
CMA HMA1 HEC sing 107 n n 
CMA HMA2 HEC sing 108 n n 
CMA HMA3 HEC sing 109 n n 
CAA CBA HEC sing 110 n n 
CAA HAA1 HEC sing 111 n n 
CAA HAA2 HEC sing 112 n n 
CBA CGA HEC sing 113 n n 
CBA HBA1 HEC sing 114 n n 
CBA HBA2 HEC sing 115 n n 
CGA O1A HEC doub 116 n n 
CGA O2A HEC sing 117 n n 
O2A H2A HEC sing 118 n n 
NB C1B HEC sing 119 n y 
NB C4B HEC sing 120 n y 
C1B C2B HEC doub 121 n y 
C2B C3B HEC sing 122 n y 
C2B CMB HEC sing 123 n n 
C3B C4B HEC sing 124 n y 
C3B CAB HEC doub 125 e n 
CMB HMB1 HEC sing 126 n n 
CMB HMB2 HEC sing 127 n n 
CMB HMB3 HEC sing 128 n n 
CAB CBB HEC sing 129 n n 
CAB HAB HEC sing 130 n n 
CBB HBB1 HEC sing 131 n n 
CBB HBB2 HEC sing 132 n n 
CBB HBB3 HEC sing 133 n n 
NC C1C HEC sing 134 n y 
NC C4C HEC sing 135 n y 
C1C C2C HEC doub 136 n y 
C2C C3C HEC sing 137 n y 
C2C CMC HEC sing 138 n n 
C3C C4C HEC sing 139 n y 
C3C CAC HEC doub 140 e n 
CMC HMC1 HEC sing 141 n n 
CMC HMC2 HEC sing 142 n n 
CMC HMC3 HEC sing 143 n n 
CAC CBC HEC sing 144 n n 
CAC HAC HEC sing 145 n n 
CBC HBC1 HEC sing 146 n n 
CBC HBC2 HEC sing 147 n n 
CBC HBC3 HEC sing 148 n n 
ND C1D HEC sing 149 n y 
ND C4D HEC sing 150 n y 
C1D C2D HEC doub 151 n y 
C2D C3D HEC sing 152 n y 
C2D CMD HEC sing 153 n n 
C3D C4D HEC doub 154 n y 
C3D CAD HEC sing 155 n n 
CMD HMD1 HEC sing 156 n n 
CMD HMD2 HEC sing 157 n n 
CMD HMD3 HEC sing 158 n n 
CAD CBD HEC sing 159 n n 
CAD HAD1 HEC sing 160 n n 
CAD HAD2 HEC sing 161 n n 
CBD CGD HEC sing 162 n n 
CBD HBD1 HEC sing 163 n n 
CBD HBD2 HEC sing 164 n n 
CGD O1D HEC doub 165 n n 
CGD O2D HEC sing 166 n n 
O2D H2D HEC sing 167 n n 
#
_atom_sites.entry_id                     1LM2 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CR A 1 188 188 CR CRM . 
C 3 HEC A 1 98 98 HEC HEC . 
D 3 HEC A 1 128 128 HEC HEC . 
E 3 HEC A 1 158 158 HEC HEC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEC . . . D 3 3.691 2.943 -0.313 1 10 ? FE HEC 128 A 1 
HETATM 2 C CHA HEC . . . D 3 6.994 3.516 -0.869 1 10 ? CHA HEC 128 A 1 
HETATM 3 C CHB HEC . . . D 3 3.791 0.418 -2.583 1 10 ? CHB HEC 128 A 1 
HETATM 4 C CHC HEC . . . D 3 0.598 2.072 0.631 1 10 ? CHC HEC 128 A 1 
HETATM 5 C CHD HEC . . . D 3 3.47 5.769 1.411 1 10 ? CHD HEC 128 A 1 
HETATM 6 N NA HEC . . . D 3 5.103 2.178 -1.455 1 10 ? NA HEC 128 A 1 
HETATM 7 C C1A HEC . . . D 3 6.399 2.497 -1.599 1 10 ? C1A HEC 128 A 1 
HETATM 8 C C2A HEC . . . D 3 7.157 1.462 -2.343 1 10 ? C2A HEC 128 A 1 
HETATM 9 C C3A HEC . . . D 3 6.23 0.633 -2.824 1 10 ? C3A HEC 128 A 1 
HETATM 10 C C4A HEC . . . D 3 4.977 0.976 -2.312 1 10 ? C4A HEC 128 A 1 
HETATM 11 C CMA HEC . . . D 3 6.51 -0.636 -3.716 1 10 ? CMA HEC 128 A 1 
HETATM 12 C CAA HEC . . . D 3 8.626 1.602 -2.62 1 10 ? CAA HEC 128 A 1 
HETATM 13 C CBA HEC . . . D 3 9.418 1.426 -1.285 1 10 ? CBA HEC 128 A 1 
HETATM 14 C CGA HEC . . . D 3 10.903 1.759 -1.286 1 10 ? CGA HEC 128 A 1 
HETATM 15 O O1A HEC . . . D 3 11.428 1.682 -2.402 1 10 ? O1A HEC 128 A 1 
HETATM 16 O O2A HEC . . . D 3 11.481 2.088 -0.228 1 10 ? O2A HEC 128 A 1 
HETATM 17 N NB HEC . . . D 3 2.409 1.51 -0.874 1 10 ? NB HEC 128 A 1 
HETATM 18 C C1B HEC . . . D 3 2.567 0.695 -1.988 1 10 ? C1B HEC 128 A 1 
HETATM 19 C C2B HEC . . . D 3 1.347 -0.102 -2.066 1 10 ? C2B HEC 128 A 1 
HETATM 20 C C3B HEC . . . D 3 0.449 0.293 -1.13 1 10 ? C3B HEC 128 A 1 
HETATM 21 C C4B HEC . . . D 3 1.147 1.347 -0.444 1 10 ? C4B HEC 128 A 1 
HETATM 22 C CMB HEC . . . D 3 1.125 -1.144 -3.223 1 10 ? CMB HEC 128 A 1 
HETATM 23 C CAB HEC . . . D 3 -0.967 -0.137 -0.849 1 10 ? CAB HEC 128 A 1 
HETATM 24 C CBB HEC . . . D 3 -1.12 -1.031 0.392 1 10 ? CBB HEC 128 A 1 
HETATM 25 N NC HEC . . . D 3 2.31 3.806 0.827 1 10 ? NC HEC 128 A 1 
HETATM 26 C C1C HEC . . . D 3 1.07 3.35 1.156 1 10 ? C1C HEC 128 A 1 
HETATM 27 C C2C HEC . . . D 3 0.242 4.201 1.917 1 10 ? C2C HEC 128 A 1 
HETATM 28 C C3C HEC . . . D 3 1.072 5.232 2.18 1 10 ? C3C HEC 128 A 1 
HETATM 29 C C4C HEC . . . D 3 2.318 5.038 1.44 1 10 ? C4C HEC 128 A 1 
HETATM 30 C CMC HEC . . . D 3 -1.156 3.979 2.408 1 10 ? CMC HEC 128 A 1 
HETATM 31 C CAC HEC . . . D 3 0.795 6.634 2.805 1 10 ? CAC HEC 128 A 1 
HETATM 32 C CBC HEC . . . D 3 -0.11 6.538 4.054 1 10 ? CBC HEC 128 A 1 
HETATM 33 N ND HEC . . . D 3 4.981 4.394 0.182 1 10 ? ND HEC 128 A 1 
HETATM 34 C C1D HEC . . . D 3 4.703 5.532 0.929 1 10 ? C1D HEC 128 A 1 
HETATM 35 C C2D HEC . . . D 3 5.856 6.292 1.075 1 10 ? C2D HEC 128 A 1 
HETATM 36 C C3D HEC . . . D 3 6.862 5.646 0.464 1 10 ? C3D HEC 128 A 1 
HETATM 37 C C4D HEC . . . D 3 6.321 4.388 -0.045 1 10 ? C4D HEC 128 A 1 
HETATM 38 C CMD HEC . . . D 3 5.989 7.647 1.91 1 10 ? CMD HEC 128 A 1 
HETATM 39 C CAD HEC . . . D 3 8.352 6.068 0.499 1 10 ? CAD HEC 128 A 1 
HETATM 40 C CBD HEC . . . D 3 8.973 5.911 1.867 1 10 ? CBD HEC 128 A 1 
HETATM 41 C CGD HEC . . . D 3 8.755 4.605 2.608 1 10 ? CGD HEC 128 A 1 
HETATM 42 O O1D HEC . . . D 3 7.882 3.823 2.144 1 10 ? O1D HEC 128 A 1 
HETATM 43 O O2D HEC . . . D 3 9.353 4.522 3.704 1 10 ? O2D HEC 128 A 1 
HETATM 44 H HHA HEC . . . D 3 7.881 3.841 -1.391 1 10 ? HHA HEC 128 A 1 
HETATM 45 H HHB HEC . . . D 3 3.738 -0.462 -3.207 1 10 ? HHB HEC 128 A 1 
HETATM 46 H HHC HEC . . . D 3 -0.467 2.049 0.809 1 10 ? HHC HEC 128 A 1 
HETATM 47 H HHD HEC . . . D 3 3.642 6.536 2.151 1 10 ? HHD HEC 128 A 1 
HETATM 48 H HMA1 HEC . . . D 3 6.567 -0.339 -4.764 1 10 ? HMA1 HEC 128 A 1 
HETATM 49 H HMA2 HEC . . . D 3 7.455 -1.089 -3.416 1 10 ? HMA2 HEC 128 A 1 
HETATM 50 H HMA3 HEC . . . D 3 5.704 -1.357 -3.587 1 10 ? HMA3 HEC 128 A 1 
HETATM 51 H HAA1 HEC . . . D 3 8.936 0.839 -3.334 1 10 ? HAA1 HEC 128 A 1 
HETATM 52 H HAA2 HEC . . . D 3 8.825 2.59 -3.036 1 10 ? HAA2 HEC 128 A 1 
HETATM 53 H HBA1 HEC . . . D 3 8.986 2.068 -0.518 1 10 ? HBA1 HEC 128 A 1 
HETATM 54 H HBA2 HEC . . . D 3 9.361 0.387 -0.962 1 10 ? HBA2 HEC 128 A 1 
HETATM 55 H HMB1 HEC . . . D 3 0.249 -0.861 -3.805 1 10 ? HMB1 HEC 128 A 1 
HETATM 56 H HMB2 HEC . . . D 3 2.001 -1.16 -3.87 1 10 ? HMB2 HEC 128 A 1 
HETATM 57 H HMB3 HEC . . . D 3 0.972 -2.135 -2.795 1 10 ? HMB3 HEC 128 A 1 
HETATM 58 H HAB HEC . . . D 3 -1.558 0.729 -0.551 1 10 ? HAB HEC 128 A 1 
HETATM 59 H HBB1 HEC . . . D 3 -1.652 -0.485 1.171 1 10 ? HBB1 HEC 128 A 1 
HETATM 60 H HBB2 HEC . . . D 3 -1.683 -1.926 0.128 1 10 ? HBB2 HEC 128 A 1 
HETATM 61 H HBB3 HEC . . . D 3 -0.134 -1.317 0.757 1 10 ? HBB3 HEC 128 A 1 
HETATM 62 H HMC1 HEC . . . D 3 -1.682 3.316 1.722 1 10 ? HMC1 HEC 128 A 1 
HETATM 63 H HMC2 HEC . . . D 3 -1.125 3.526 3.399 1 10 ? HMC2 HEC 128 A 1 
HETATM 64 H HMC3 HEC . . . D 3 -1.678 4.934 2.462 1 10 ? HMC3 HEC 128 A 1 
HETATM 65 H HAC HEC . . . D 3 1.738 7.09 3.109 1 10 ? HAC HEC 128 A 1 
HETATM 66 H HBC1 HEC . . . D 3 -0.644 5.587 4.044 1 10 ? HBC1 HEC 128 A 1 
HETATM 67 H HBC2 HEC . . . D 3 0.502 6.601 4.953 1 10 ? HBC2 HEC 128 A 1 
HETATM 68 H HBC3 HEC . . . D 3 -0.83 7.357 4.046 1 10 ? HBC3 HEC 128 A 1 
HETATM 69 H HMD1 HEC . . . D 3 6.449 7.437 2.875 1 10 ? HMD1 HEC 128 A 1 
HETATM 70 H HMD2 HEC . . . D 3 6.608 8.354 1.359 1 10 ? HMD2 HEC 128 A 1 
HETATM 71 H HMD3 HEC . . . D 3 4.999 8.077 2.066 1 10 ? HMD3 HEC 128 A 1 
HETATM 72 H HAD1 HEC . . . D 3 8.922 5.452 -0.197 1 10 ? HAD1 HEC 128 A 1 
HETATM 73 H HAD2 HEC . . . D 3 8.441 7.116 0.212 1 10 ? HAD2 HEC 128 A 1 
HETATM 74 H HBD1 HEC . . . D 3 10.056 6.012 1.789 1 10 ? HBD1 HEC 128 A 1 
HETATM 75 H HBD2 HEC . . . D 3 8.585 6.68 2.534 1 10 ? HBD2 HEC 128 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           8285 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           75 
#