data_1LNY # _model_server_result.job_id YBZ536tTSiuahI4hkObMng _model_server_result.datetime_utc '2024-10-18 16:29:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lny # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1452}' # _entry.id 1LNY # _exptl.entry_id 1LNY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.46 _cell.angle_gamma 90 _cell.entry_id 1LNY _cell.length_a 128.5 _cell.length_b 70.12 _cell.length_c 105.13 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LNY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 43 A ASP 43 1_555 C MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 A O GLY 70 A GLY 70 1_555 C MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc3 I O HOH . A HOH 817 1_555 C MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc4 D O1 IMO . A IMO 1451 1_555 C MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc5 E O2A GDP . A GDP 1452 1_555 C MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc6 E O2B GDP . A GDP 1452 1_555 C MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc7 B OD1 ASP 43 B ASP 43 1_555 F MG MG . B MG 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc8 B O GLY 70 B GLY 70 1_555 F MG MG . B MG 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc9 J O HOH . B HOH 696 1_555 F MG MG . B MG 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc10 G O2A GDP . B GDP 1454 1_555 F MG MG . B MG 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc11 G O2B GDP . B GDP 1454 1_555 F MG MG . B MG 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc12 H O1 IMO . B IMO 1455 1_555 F MG MG . B MG 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 1LNY _atom_sites.fract_transf_matrix[1][1] 0.007782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000062 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014261 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009512 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 1453 453 MG MG . D 3 IMO A 1 1451 451 IMO IPP . E 4 GDP A 1 1452 452 GDP GDP . F 2 MG B 1 1456 456 MG MG . G 4 GDP B 1 1454 454 GDP GDP . H 3 IMO B 1 1455 455 IMO IPP . I 5 HOH A 1 501 501 HOH HOH . I 5 HOH A 2 503 503 HOH HOH . I 5 HOH A 3 505 505 HOH HOH . I 5 HOH A 4 506 506 HOH HOH . I 5 HOH A 5 507 507 HOH HOH . I 5 HOH A 6 508 508 HOH HOH . I 5 HOH A 7 511 511 HOH HOH . I 5 HOH A 8 512 512 HOH HOH . I 5 HOH A 9 515 515 HOH HOH . I 5 HOH A 10 516 516 HOH HOH . I 5 HOH A 11 517 517 HOH HOH . I 5 HOH A 12 518 518 HOH HOH . I 5 HOH A 13 519 519 HOH HOH . I 5 HOH A 14 520 520 HOH HOH . I 5 HOH A 15 522 522 HOH HOH . I 5 HOH A 16 523 523 HOH HOH . I 5 HOH A 17 526 526 HOH HOH . I 5 HOH A 18 528 528 HOH HOH . I 5 HOH A 19 531 531 HOH HOH . I 5 HOH A 20 532 532 HOH HOH . I 5 HOH A 21 535 535 HOH HOH . I 5 HOH A 22 539 539 HOH HOH . I 5 HOH A 23 542 542 HOH HOH . I 5 HOH A 24 543 543 HOH HOH . I 5 HOH A 25 544 544 HOH HOH . I 5 HOH A 26 546 546 HOH HOH . I 5 HOH A 27 548 548 HOH HOH . I 5 HOH A 28 552 552 HOH HOH . I 5 HOH A 29 556 556 HOH HOH . I 5 HOH A 30 558 558 HOH HOH . I 5 HOH A 31 560 560 HOH HOH . I 5 HOH A 32 561 561 HOH HOH . I 5 HOH A 33 562 562 HOH HOH . I 5 HOH A 34 564 564 HOH HOH . I 5 HOH A 35 565 565 HOH HOH . I 5 HOH A 36 570 570 HOH HOH . I 5 HOH A 37 571 571 HOH HOH . I 5 HOH A 38 572 572 HOH HOH . I 5 HOH A 39 574 574 HOH HOH . I 5 HOH A 40 575 575 HOH HOH . I 5 HOH A 41 576 576 HOH HOH . I 5 HOH A 42 581 581 HOH HOH . I 5 HOH A 43 583 583 HOH HOH . I 5 HOH A 44 585 585 HOH HOH . I 5 HOH A 45 586 586 HOH HOH . I 5 HOH A 46 587 587 HOH HOH . I 5 HOH A 47 588 588 HOH HOH . I 5 HOH A 48 591 591 HOH HOH . I 5 HOH A 49 592 592 HOH HOH . I 5 HOH A 50 599 599 HOH HOH . I 5 HOH A 51 600 600 HOH HOH . I 5 HOH A 52 601 601 HOH HOH . I 5 HOH A 53 602 602 HOH HOH . I 5 HOH A 54 603 603 HOH HOH . I 5 HOH A 55 604 604 HOH HOH . I 5 HOH A 56 608 608 HOH HOH . I 5 HOH A 57 610 610 HOH HOH . I 5 HOH A 58 611 611 HOH HOH . I 5 HOH A 59 612 612 HOH HOH . I 5 HOH A 60 616 616 HOH HOH . I 5 HOH A 61 617 617 HOH HOH . I 5 HOH A 62 618 618 HOH HOH . I 5 HOH A 63 620 620 HOH HOH . I 5 HOH A 64 621 621 HOH HOH . I 5 HOH A 65 622 622 HOH HOH . I 5 HOH A 66 623 623 HOH HOH . I 5 HOH A 67 625 625 HOH HOH . I 5 HOH A 68 626 626 HOH HOH . I 5 HOH A 69 628 628 HOH HOH . I 5 HOH A 70 629 629 HOH HOH . I 5 HOH A 71 631 631 HOH HOH . I 5 HOH A 72 632 632 HOH HOH . I 5 HOH A 73 633 633 HOH HOH . I 5 HOH A 74 640 640 HOH HOH . I 5 HOH A 75 641 641 HOH HOH . I 5 HOH A 76 644 644 HOH HOH . I 5 HOH A 77 645 645 HOH HOH . I 5 HOH A 78 648 648 HOH HOH . I 5 HOH A 79 649 649 HOH HOH . I 5 HOH A 80 651 651 HOH HOH . I 5 HOH A 81 653 653 HOH HOH . I 5 HOH A 82 654 654 HOH HOH . I 5 HOH A 83 655 655 HOH HOH . I 5 HOH A 84 657 657 HOH HOH . I 5 HOH A 85 660 660 HOH HOH . I 5 HOH A 86 661 661 HOH HOH . I 5 HOH A 87 664 664 HOH HOH . I 5 HOH A 88 665 665 HOH HOH . I 5 HOH A 89 668 668 HOH HOH . I 5 HOH A 90 669 669 HOH HOH . I 5 HOH A 91 671 671 HOH HOH . I 5 HOH A 92 673 673 HOH HOH . I 5 HOH A 93 679 679 HOH HOH . I 5 HOH A 94 681 681 HOH HOH . I 5 HOH A 95 682 682 HOH HOH . I 5 HOH A 96 685 685 HOH HOH . I 5 HOH A 97 690 690 HOH HOH . I 5 HOH A 98 693 693 HOH HOH . I 5 HOH A 99 694 694 HOH HOH . I 5 HOH A 100 697 697 HOH HOH . I 5 HOH A 101 698 698 HOH HOH . I 5 HOH A 102 700 700 HOH HOH . I 5 HOH A 103 702 702 HOH HOH . I 5 HOH A 104 703 703 HOH HOH . I 5 HOH A 105 705 705 HOH HOH . I 5 HOH A 106 706 706 HOH HOH . I 5 HOH A 107 708 708 HOH HOH . I 5 HOH A 108 714 714 HOH HOH . I 5 HOH A 109 717 717 HOH HOH . I 5 HOH A 110 720 720 HOH HOH . I 5 HOH A 111 721 721 HOH HOH . I 5 HOH A 112 722 722 HOH HOH . I 5 HOH A 113 723 723 HOH HOH . I 5 HOH A 114 725 725 HOH HOH . I 5 HOH A 115 726 726 HOH HOH . I 5 HOH A 116 731 731 HOH HOH . I 5 HOH A 117 733 733 HOH HOH . I 5 HOH A 118 735 735 HOH HOH . I 5 HOH A 119 736 736 HOH HOH . I 5 HOH A 120 737 737 HOH HOH . I 5 HOH A 121 740 740 HOH HOH . I 5 HOH A 122 741 741 HOH HOH . I 5 HOH A 123 742 742 HOH HOH . I 5 HOH A 124 744 744 HOH HOH . I 5 HOH A 125 745 745 HOH HOH . I 5 HOH A 126 746 746 HOH HOH . I 5 HOH A 127 748 748 HOH HOH . I 5 HOH A 128 750 750 HOH HOH . I 5 HOH A 129 751 751 HOH HOH . I 5 HOH A 130 753 753 HOH HOH . I 5 HOH A 131 754 754 HOH HOH . I 5 HOH A 132 755 755 HOH HOH . I 5 HOH A 133 756 756 HOH HOH . I 5 HOH A 134 757 757 HOH HOH . I 5 HOH A 135 759 759 HOH HOH . I 5 HOH A 136 760 760 HOH HOH . I 5 HOH A 137 761 761 HOH HOH . I 5 HOH A 138 762 762 HOH HOH . I 5 HOH A 139 765 765 HOH HOH . I 5 HOH A 140 767 767 HOH HOH . I 5 HOH A 141 769 769 HOH HOH . I 5 HOH A 142 771 771 HOH HOH . I 5 HOH A 143 773 773 HOH HOH . I 5 HOH A 144 778 778 HOH HOH . I 5 HOH A 145 780 780 HOH HOH . I 5 HOH A 146 782 782 HOH HOH . I 5 HOH A 147 785 785 HOH HOH . I 5 HOH A 148 786 786 HOH HOH . I 5 HOH A 149 788 788 HOH HOH . I 5 HOH A 150 790 790 HOH HOH . I 5 HOH A 151 795 795 HOH HOH . I 5 HOH A 152 799 799 HOH HOH . I 5 HOH A 153 800 800 HOH HOH . I 5 HOH A 154 802 802 HOH HOH . I 5 HOH A 155 807 807 HOH HOH . I 5 HOH A 156 809 809 HOH HOH . I 5 HOH A 157 810 810 HOH HOH . I 5 HOH A 158 811 811 HOH HOH . I 5 HOH A 159 812 812 HOH HOH . I 5 HOH A 160 814 814 HOH HOH . I 5 HOH A 161 817 817 HOH HOH . J 5 HOH B 1 502 502 HOH HOH . J 5 HOH B 2 504 504 HOH HOH . J 5 HOH B 3 509 509 HOH HOH . J 5 HOH B 4 510 510 HOH HOH . J 5 HOH B 5 513 513 HOH HOH . J 5 HOH B 6 514 514 HOH HOH . J 5 HOH B 7 521 521 HOH HOH . J 5 HOH B 8 524 524 HOH HOH . J 5 HOH B 9 525 525 HOH HOH . J 5 HOH B 10 527 527 HOH HOH . J 5 HOH B 11 529 529 HOH HOH . J 5 HOH B 12 530 530 HOH HOH . J 5 HOH B 13 533 533 HOH HOH . J 5 HOH B 14 534 534 HOH HOH . J 5 HOH B 15 536 536 HOH HOH . J 5 HOH B 16 537 537 HOH HOH . J 5 HOH B 17 538 538 HOH HOH . J 5 HOH B 18 540 540 HOH HOH . J 5 HOH B 19 541 541 HOH HOH . J 5 HOH B 20 545 545 HOH HOH . J 5 HOH B 21 547 547 HOH HOH . J 5 HOH B 22 549 549 HOH HOH . J 5 HOH B 23 550 550 HOH HOH . J 5 HOH B 24 551 551 HOH HOH . J 5 HOH B 25 553 553 HOH HOH . J 5 HOH B 26 554 554 HOH HOH . J 5 HOH B 27 555 555 HOH HOH . J 5 HOH B 28 557 557 HOH HOH . J 5 HOH B 29 559 559 HOH HOH . J 5 HOH B 30 563 563 HOH HOH . J 5 HOH B 31 566 566 HOH HOH . J 5 HOH B 32 567 567 HOH HOH . J 5 HOH B 33 568 568 HOH HOH . J 5 HOH B 34 569 569 HOH HOH . J 5 HOH B 35 573 573 HOH HOH . J 5 HOH B 36 577 577 HOH HOH . J 5 HOH B 37 578 578 HOH HOH . J 5 HOH B 38 579 579 HOH HOH . J 5 HOH B 39 580 580 HOH HOH . J 5 HOH B 40 582 582 HOH HOH . J 5 HOH B 41 584 584 HOH HOH . J 5 HOH B 42 589 589 HOH HOH . J 5 HOH B 43 590 590 HOH HOH . J 5 HOH B 44 593 593 HOH HOH . J 5 HOH B 45 594 594 HOH HOH . J 5 HOH B 46 595 595 HOH HOH . J 5 HOH B 47 596 596 HOH HOH . J 5 HOH B 48 597 597 HOH HOH . J 5 HOH B 49 598 598 HOH HOH . J 5 HOH B 50 605 605 HOH HOH . J 5 HOH B 51 606 606 HOH HOH . J 5 HOH B 52 607 607 HOH HOH . J 5 HOH B 53 609 609 HOH HOH . J 5 HOH B 54 613 613 HOH HOH . J 5 HOH B 55 614 614 HOH HOH . J 5 HOH B 56 615 615 HOH HOH . J 5 HOH B 57 619 619 HOH HOH . J 5 HOH B 58 624 624 HOH HOH . J 5 HOH B 59 627 627 HOH HOH . J 5 HOH B 60 630 630 HOH HOH . J 5 HOH B 61 634 634 HOH HOH . J 5 HOH B 62 635 635 HOH HOH . J 5 HOH B 63 636 636 HOH HOH . J 5 HOH B 64 637 637 HOH HOH . J 5 HOH B 65 638 638 HOH HOH . J 5 HOH B 66 639 639 HOH HOH . J 5 HOH B 67 642 642 HOH HOH . J 5 HOH B 68 643 643 HOH HOH . J 5 HOH B 69 646 646 HOH HOH . J 5 HOH B 70 647 647 HOH HOH . J 5 HOH B 71 650 650 HOH HOH . J 5 HOH B 72 652 652 HOH HOH . J 5 HOH B 73 656 656 HOH HOH . J 5 HOH B 74 658 658 HOH HOH . J 5 HOH B 75 659 659 HOH HOH . J 5 HOH B 76 662 662 HOH HOH . J 5 HOH B 77 663 663 HOH HOH . J 5 HOH B 78 666 666 HOH HOH . J 5 HOH B 79 667 667 HOH HOH . J 5 HOH B 80 670 670 HOH HOH . J 5 HOH B 81 672 672 HOH HOH . J 5 HOH B 82 674 674 HOH HOH . J 5 HOH B 83 675 675 HOH HOH . J 5 HOH B 84 676 676 HOH HOH . J 5 HOH B 85 677 677 HOH HOH . J 5 HOH B 86 678 678 HOH HOH . J 5 HOH B 87 680 680 HOH HOH . J 5 HOH B 88 683 683 HOH HOH . J 5 HOH B 89 684 684 HOH HOH . J 5 HOH B 90 686 686 HOH HOH . J 5 HOH B 91 687 687 HOH HOH . J 5 HOH B 92 688 688 HOH HOH . J 5 HOH B 93 689 689 HOH HOH . J 5 HOH B 94 691 691 HOH HOH . J 5 HOH B 95 692 692 HOH HOH . J 5 HOH B 96 695 695 HOH HOH . J 5 HOH B 97 696 696 HOH HOH . J 5 HOH B 98 699 699 HOH HOH . J 5 HOH B 99 701 701 HOH HOH . J 5 HOH B 100 704 704 HOH HOH . J 5 HOH B 101 707 707 HOH HOH . J 5 HOH B 102 709 709 HOH HOH . J 5 HOH B 103 710 710 HOH HOH . J 5 HOH B 104 711 711 HOH HOH . J 5 HOH B 105 712 712 HOH HOH . J 5 HOH B 106 713 713 HOH HOH . J 5 HOH B 107 715 715 HOH HOH . J 5 HOH B 108 716 716 HOH HOH . J 5 HOH B 109 718 718 HOH HOH . J 5 HOH B 110 719 719 HOH HOH . J 5 HOH B 111 724 724 HOH HOH . J 5 HOH B 112 727 727 HOH HOH . J 5 HOH B 113 728 728 HOH HOH . J 5 HOH B 114 729 729 HOH HOH . J 5 HOH B 115 730 730 HOH HOH . J 5 HOH B 116 732 732 HOH HOH . J 5 HOH B 117 734 734 HOH HOH . J 5 HOH B 118 738 738 HOH HOH . J 5 HOH B 119 739 739 HOH HOH . J 5 HOH B 120 743 743 HOH HOH . J 5 HOH B 121 747 747 HOH HOH . J 5 HOH B 122 749 749 HOH HOH . J 5 HOH B 123 752 752 HOH HOH . J 5 HOH B 124 758 758 HOH HOH . J 5 HOH B 125 763 763 HOH HOH . J 5 HOH B 126 764 764 HOH HOH . J 5 HOH B 127 766 766 HOH HOH . J 5 HOH B 128 768 768 HOH HOH . J 5 HOH B 129 770 770 HOH HOH . J 5 HOH B 130 772 772 HOH HOH . J 5 HOH B 131 774 774 HOH HOH . J 5 HOH B 132 775 775 HOH HOH . J 5 HOH B 133 776 776 HOH HOH . J 5 HOH B 134 777 777 HOH HOH . J 5 HOH B 135 779 779 HOH HOH . J 5 HOH B 136 781 781 HOH HOH . J 5 HOH B 137 783 783 HOH HOH . J 5 HOH B 138 784 784 HOH HOH . J 5 HOH B 139 787 787 HOH HOH . J 5 HOH B 140 789 789 HOH HOH . J 5 HOH B 141 791 791 HOH HOH . J 5 HOH B 142 792 792 HOH HOH . J 5 HOH B 143 793 793 HOH HOH . J 5 HOH B 144 794 794 HOH HOH . J 5 HOH B 145 796 796 HOH HOH . J 5 HOH B 146 797 797 HOH HOH . J 5 HOH B 147 798 798 HOH HOH . J 5 HOH B 148 801 801 HOH HOH . J 5 HOH B 149 803 803 HOH HOH . J 5 HOH B 150 804 804 HOH HOH . J 5 HOH B 151 805 805 HOH HOH . J 5 HOH B 152 806 806 HOH HOH . J 5 HOH B 153 808 808 HOH HOH . J 5 HOH B 154 813 813 HOH HOH . J 5 HOH B 155 815 815 HOH HOH . J 5 HOH B 156 816 816 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 4 53.735 12.92 12.87 1 36.19 ? PB GDP 1452 A 1 HETATM 2 O O1B GDP . . . E 4 54.048 13.985 13.911 1 34.94 ? O1B GDP 1452 A 1 HETATM 3 O O2B GDP . . . E 4 54.445 11.607 13.12 1 35.1 ? O2B GDP 1452 A 1 HETATM 4 O O3B GDP . . . E 4 52.231 12.742 12.663 1 33.16 ? O3B GDP 1452 A 1 HETATM 5 O O3A GDP . . . E 4 54.314 13.491 11.457 1 33.09 ? O3A GDP 1452 A 1 HETATM 6 P PA GDP . . . E 4 55.857 13.379 10.945 1 35.87 ? PA GDP 1452 A 1 HETATM 7 O O1A GDP . . . E 4 56.578 14.555 11.506 1 35.75 ? O1A GDP 1452 A 1 HETATM 8 O O2A GDP . . . E 4 56.354 12.013 11.243 1 36.29 ? O2A GDP 1452 A 1 HETATM 9 O O5' GDP . . . E 4 55.862 13.52 9.359 1 37.24 ? O5' GDP 1452 A 1 HETATM 10 C C5' GDP . . . E 4 55.094 14.52 8.704 1 34.04 ? C5' GDP 1452 A 1 HETATM 11 C C4' GDP . . . E 4 55.988 15.369 7.833 1 35.7 ? C4' GDP 1452 A 1 HETATM 12 O O4' GDP . . . E 4 55.192 16.23 6.988 1 35.75 ? O4' GDP 1452 A 1 HETATM 13 C C3' GDP . . . E 4 56.964 16.266 8.579 1 37.55 ? C3' GDP 1452 A 1 HETATM 14 O O3' GDP . . . E 4 58.256 16.17 7.997 1 40.06 ? O3' GDP 1452 A 1 HETATM 15 C C2' GDP . . . E 4 56.339 17.651 8.466 1 37.03 ? C2' GDP 1452 A 1 HETATM 16 O O2' GDP . . . E 4 57.275 18.708 8.491 1 37.88 ? O2' GDP 1452 A 1 HETATM 17 C C1' GDP . . . E 4 55.632 17.563 7.119 1 34.77 ? C1' GDP 1452 A 1 HETATM 18 N N9 GDP . . . E 4 54.444 18.399 7.061 1 34.3 ? N9 GDP 1452 A 1 HETATM 19 C C8 GDP . . . E 4 53.432 18.475 7.985 1 31.14 ? C8 GDP 1452 A 1 HETATM 20 N N7 GDP . . . E 4 52.472 19.28 7.624 1 30.97 ? N7 GDP 1452 A 1 HETATM 21 C C5 GDP . . . E 4 52.881 19.77 6.393 1 32.58 ? C5 GDP 1452 A 1 HETATM 22 C C6 GDP . . . E 4 52.245 20.662 5.506 1 33.16 ? C6 GDP 1452 A 1 HETATM 23 O O6 GDP . . . E 4 51.145 21.223 5.633 1 34.29 ? O6 GDP 1452 A 1 HETATM 24 N N1 GDP . . . E 4 53.013 20.877 4.363 1 34.21 ? N1 GDP 1452 A 1 HETATM 25 C C2 GDP . . . E 4 54.234 20.297 4.107 1 32.07 ? C2 GDP 1452 A 1 HETATM 26 N N2 GDP . . . E 4 54.825 20.621 2.946 1 31.73 ? N2 GDP 1452 A 1 HETATM 27 N N3 GDP . . . E 4 54.831 19.462 4.925 1 31.45 ? N3 GDP 1452 A 1 HETATM 28 C C4 GDP . . . E 4 54.104 19.243 6.039 1 33.7 ? C4 GDP 1452 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 61 _model_server_stats.query_time_ms 506 _model_server_stats.encode_time_ms 50 _model_server_stats.element_count 28 #