data_1LP1 # _model_server_result.job_id -lDXhUExtGpCusLUooQfjw _model_server_result.datetime_utc '2024-12-01 12:36:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lp1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":304}' # _entry.id 1LP1 # _exptl.entry_id 1LP1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1LP1 _cell.length_a 55.546 _cell.length_b 55.546 _cell.length_c 155.749 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 25.958167 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OE1 GLU 25 B GLU 25 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc2 E O1 SO4 . B SO4 302 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? metalc ? metalc3 E O3 SO4 . B SO4 302 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc4 F S SO4 . B SO4 303 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc5 F O3 SO4 . B SO4 303 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc6 F O4 SO4 . B SO4 303 1_555 G MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 258 n n S O2 SO4 doub 259 n n S O3 SO4 sing 260 n n S O4 SO4 sing 261 n n # _atom_sites.entry_id 1LP1 _atom_sites.fract_transf_matrix[1][1] 0.018003 _atom_sites.fract_transf_matrix[1][2] 0.010394 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 301 1 SO4 SO4 . D 3 SO4 A 1 304 4 SO4 SO4 . E 3 SO4 B 1 302 2 SO4 SO4 . F 3 SO4 B 1 303 3 SO4 SO4 . G 4 MG B 1 401 1 MG MG2 . H 5 HOH A 1 305 1 HOH HOH . H 5 HOH A 2 306 10 HOH HOH . H 5 HOH A 3 307 11 HOH HOH . H 5 HOH A 4 308 17 HOH HOH . H 5 HOH A 5 309 21 HOH HOH . H 5 HOH A 6 310 56 HOH HOH . H 5 HOH A 7 311 60 HOH HOH . H 5 HOH A 8 312 64 HOH HOH . H 5 HOH A 9 313 75 HOH HOH . H 5 HOH A 10 314 76 HOH HOH . H 5 HOH A 11 315 78 HOH HOH . H 5 HOH A 12 316 79 HOH HOH . H 5 HOH A 13 317 81 HOH HOH . H 5 HOH A 14 318 82 HOH HOH . H 5 HOH A 15 319 84 HOH HOH . H 5 HOH A 16 320 85 HOH HOH . H 5 HOH A 17 321 86 HOH HOH . H 5 HOH A 18 322 88 HOH HOH . H 5 HOH A 19 323 89 HOH HOH . H 5 HOH A 20 324 90 HOH HOH . H 5 HOH A 21 325 91 HOH HOH . H 5 HOH A 22 326 95 HOH HOH . H 5 HOH A 23 327 101 HOH HOH . H 5 HOH A 24 328 106 HOH HOH . H 5 HOH A 25 329 107 HOH HOH . H 5 HOH A 26 330 109 HOH HOH . H 5 HOH A 27 331 112 HOH HOH . H 5 HOH A 28 332 114 HOH HOH . H 5 HOH A 29 333 115 HOH HOH . H 5 HOH A 30 334 119 HOH HOH . H 5 HOH A 31 335 120 HOH HOH . H 5 HOH A 32 336 122 HOH HOH . H 5 HOH A 33 337 123 HOH HOH . H 5 HOH A 34 338 124 HOH HOH . H 5 HOH A 35 339 125 HOH HOH . H 5 HOH A 36 340 127 HOH HOH . H 5 HOH A 37 341 129 HOH HOH . H 5 HOH A 38 342 130 HOH HOH . H 5 HOH A 39 343 131 HOH HOH . H 5 HOH A 40 344 133 HOH HOH . H 5 HOH A 41 345 137 HOH HOH . H 5 HOH A 42 346 140 HOH HOH . H 5 HOH A 43 347 144 HOH HOH . H 5 HOH A 44 348 146 HOH HOH . H 5 HOH A 45 349 147 HOH HOH . H 5 HOH A 46 350 149 HOH HOH . H 5 HOH A 47 351 150 HOH HOH . H 5 HOH A 48 352 151 HOH HOH . H 5 HOH A 49 353 152 HOH HOH . H 5 HOH A 50 354 153 HOH HOH . H 5 HOH A 51 355 155 HOH HOH . H 5 HOH A 52 356 157 HOH HOH . H 5 HOH A 53 357 160 HOH HOH . H 5 HOH A 54 358 161 HOH HOH . H 5 HOH A 55 359 165 HOH HOH . H 5 HOH A 56 360 170 HOH HOH . H 5 HOH A 57 361 171 HOH HOH . H 5 HOH A 58 362 175 HOH HOH . H 5 HOH A 59 363 182 HOH HOH . H 5 HOH A 60 364 183 HOH HOH . H 5 HOH A 61 365 184 HOH HOH . H 5 HOH A 62 366 190 HOH HOH . H 5 HOH A 63 367 192 HOH HOH . H 5 HOH A 64 368 193 HOH HOH . H 5 HOH A 65 369 194 HOH HOH . H 5 HOH A 66 370 196 HOH HOH . H 5 HOH A 67 371 198 HOH HOH . H 5 HOH A 68 372 199 HOH HOH . H 5 HOH A 69 373 201 HOH HOH . H 5 HOH A 70 374 208 HOH HOH . H 5 HOH A 71 375 212 HOH HOH . H 5 HOH A 72 376 218 HOH HOH . H 5 HOH A 73 377 228 HOH HOH . H 5 HOH A 74 378 229 HOH HOH . H 5 HOH A 75 379 230 HOH HOH . H 5 HOH A 76 380 231 HOH HOH . H 5 HOH A 77 381 232 HOH HOH . H 5 HOH A 78 382 234 HOH HOH . H 5 HOH A 79 383 235 HOH HOH . H 5 HOH A 80 384 236 HOH HOH . H 5 HOH A 81 385 239 HOH HOH . H 5 HOH A 82 386 240 HOH HOH . H 5 HOH A 83 387 241 HOH HOH . H 5 HOH A 84 388 242 HOH HOH . H 5 HOH A 85 389 243 HOH HOH . H 5 HOH A 86 390 244 HOH HOH . H 5 HOH A 87 391 245 HOH HOH . H 5 HOH A 88 392 247 HOH HOH . H 5 HOH A 89 393 248 HOH HOH . H 5 HOH A 90 394 249 HOH HOH . H 5 HOH A 91 395 253 HOH HOH . H 5 HOH A 92 396 254 HOH HOH . H 5 HOH A 93 397 257 HOH HOH . H 5 HOH A 94 398 113 HOH HOH . H 5 HOH A 95 399 128 HOH HOH . H 5 HOH A 96 400 136 HOH HOH . H 5 HOH A 97 401 172 HOH HOH . H 5 HOH A 98 402 186 HOH HOH . H 5 HOH A 99 403 213 HOH HOH . I 5 HOH B 1 402 2 HOH HOH . I 5 HOH B 2 403 20 HOH HOH . I 5 HOH B 3 404 73 HOH HOH . I 5 HOH B 4 405 77 HOH HOH . I 5 HOH B 5 406 80 HOH HOH . I 5 HOH B 6 407 83 HOH HOH . I 5 HOH B 7 408 87 HOH HOH . I 5 HOH B 8 409 92 HOH HOH . I 5 HOH B 9 410 93 HOH HOH . I 5 HOH B 10 411 96 HOH HOH . I 5 HOH B 11 412 97 HOH HOH . I 5 HOH B 12 413 99 HOH HOH . I 5 HOH B 13 414 102 HOH HOH . I 5 HOH B 14 415 104 HOH HOH . I 5 HOH B 15 416 108 HOH HOH . I 5 HOH B 16 417 110 HOH HOH . I 5 HOH B 17 418 111 HOH HOH . I 5 HOH B 18 419 116 HOH HOH . I 5 HOH B 19 420 117 HOH HOH . I 5 HOH B 20 421 118 HOH HOH . I 5 HOH B 21 422 121 HOH HOH . I 5 HOH B 22 423 126 HOH HOH . I 5 HOH B 23 424 132 HOH HOH . I 5 HOH B 24 425 134 HOH HOH . I 5 HOH B 25 426 135 HOH HOH . I 5 HOH B 26 427 138 HOH HOH . I 5 HOH B 27 428 139 HOH HOH . I 5 HOH B 28 429 141 HOH HOH . I 5 HOH B 29 430 142 HOH HOH . I 5 HOH B 30 431 143 HOH HOH . I 5 HOH B 31 432 145 HOH HOH . I 5 HOH B 32 433 148 HOH HOH . I 5 HOH B 33 434 154 HOH HOH . I 5 HOH B 34 435 156 HOH HOH . I 5 HOH B 35 436 158 HOH HOH . I 5 HOH B 36 437 159 HOH HOH . I 5 HOH B 37 438 162 HOH HOH . I 5 HOH B 38 439 164 HOH HOH . I 5 HOH B 39 440 166 HOH HOH . I 5 HOH B 40 441 167 HOH HOH . I 5 HOH B 41 442 169 HOH HOH . I 5 HOH B 42 443 173 HOH HOH . I 5 HOH B 43 444 176 HOH HOH . I 5 HOH B 44 445 177 HOH HOH . I 5 HOH B 45 446 178 HOH HOH . I 5 HOH B 46 447 179 HOH HOH . I 5 HOH B 47 448 180 HOH HOH . I 5 HOH B 48 449 181 HOH HOH . I 5 HOH B 49 450 185 HOH HOH . I 5 HOH B 50 451 188 HOH HOH . I 5 HOH B 51 452 189 HOH HOH . I 5 HOH B 52 453 191 HOH HOH . I 5 HOH B 53 454 195 HOH HOH . I 5 HOH B 54 455 197 HOH HOH . I 5 HOH B 55 456 202 HOH HOH . I 5 HOH B 56 457 203 HOH HOH . I 5 HOH B 57 458 204 HOH HOH . I 5 HOH B 58 459 205 HOH HOH . I 5 HOH B 59 460 206 HOH HOH . I 5 HOH B 60 461 207 HOH HOH . I 5 HOH B 61 462 209 HOH HOH . I 5 HOH B 62 463 210 HOH HOH . I 5 HOH B 63 464 211 HOH HOH . I 5 HOH B 64 465 214 HOH HOH . I 5 HOH B 65 466 215 HOH HOH . I 5 HOH B 66 467 216 HOH HOH . I 5 HOH B 67 468 217 HOH HOH . I 5 HOH B 68 469 219 HOH HOH . I 5 HOH B 69 470 220 HOH HOH . I 5 HOH B 70 471 221 HOH HOH . I 5 HOH B 71 472 222 HOH HOH . I 5 HOH B 72 473 224 HOH HOH . I 5 HOH B 73 474 225 HOH HOH . I 5 HOH B 74 475 226 HOH HOH . I 5 HOH B 75 476 227 HOH HOH . I 5 HOH B 76 477 233 HOH HOH . I 5 HOH B 77 478 246 HOH HOH . I 5 HOH B 78 479 250 HOH HOH . I 5 HOH B 79 480 251 HOH HOH . I 5 HOH B 80 481 252 HOH HOH . I 5 HOH B 81 482 255 HOH HOH . I 5 HOH B 82 483 256 HOH HOH . I 5 HOH B 83 484 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 44.302 25.626 11.202 0.6 81.68 ? S SO4 304 A 1 HETATM 2 O O1 SO4 . . . D 3 45.557 25.573 11.975 0.6 78.25 ? O1 SO4 304 A 1 HETATM 3 O O2 SO4 . . . D 3 43.149 25.739 12.115 0.6 77.87 ? O2 SO4 304 A 1 HETATM 4 O O3 SO4 . . . D 3 44.338 26.798 10.304 0.6 77.16 ? O3 SO4 304 A 1 HETATM 5 O O4 SO4 . . . D 3 44.168 24.389 10.416 0.6 74.5 ? O4 SO4 304 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #