data_1LPA
#
_model_server_result.job_id            gD7fSwXW90KqlGDM4XcvSw 
_model_server_result.datetime_utc      '2024-12-23 13:16:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lpa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":452}' 
#
_entry.id    1LPA 
#
_exptl.entry_id    1LPA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              622.834 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIUNDECYL PHOSPHATIDYL CHOLINE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1LPA 
_cell.length_a            133.4 
_cell.length_b            133.4 
_cell.length_c            92.6 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LPA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 17 A CYS 17 1_555 A SG CYS 28 A CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
disulf ? disulf2 A SG CYS 23 A CYS 23 1_555 A SG CYS 39 A CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 A SG CYS 27 A CYS 27 1_555 A SG CYS 61 A CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? 
disulf ? disulf4 A SG CYS 49 A CYS 49 1_555 A SG CYS 69 A CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? 
disulf ? disulf5 A SG CYS 63 A CYS 63 1_555 A SG CYS 87 A CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
disulf ? disulf6 B SG CYS 4 B CYS 4 1_555 B SG CYS 10 B CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf7 B SG CYS 91 B CYS 90 1_555 B SG CYS 102 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf8 B SG CYS 238 B CYS 237 1_555 B SG CYS 262 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf9 B SG CYS 286 B CYS 285 1_555 B SG CYS 297 B CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
disulf ? disulf10 B SG CYS 300 B CYS 299 1_555 B SG CYS 305 B CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
disulf ? disulf11 B SG CYS 433 B CYS 433 1_555 B SG CYS 449 B CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc1 B O GLU 188 B GLU 187 1_555 D CA CA . B CA 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.626 ? 
metalc ? metalc2 B O ARG 191 B ARG 190 1_555 D CA CA . B CA 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.637 ? 
metalc ? metalc3 B OD1 ASP 193 B ASP 192 1_555 D CA CA . B CA 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
metalc ? metalc4 B OD1 ASP 196 B ASP 195 1_555 D CA CA . B CA 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc5 B OD2 ASP 196 B ASP 195 1_555 D CA CA . B CA 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
#
_chem_comp.formula           'C32 H65 N O8 P 1' 
_chem_comp.formula_weight    622.834 
_chem_comp.id                PLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIUNDECYL PHOSPHATIDYL CHOLINE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 PLC sing 309 n n 
C1 O3P PLC sing 310 n n 
C1 H11 PLC sing 311 n n 
C1 H12 PLC sing 312 n n 
C2 C3 PLC sing 313 n n 
C2 O2 PLC sing 314 n n 
C2 H2 PLC sing 315 n n 
C3 O3 PLC sing 316 n n 
C3 H31 PLC sing 317 n n 
C3 H32 PLC sing 318 n n 
C4 C5 PLC sing 319 n n 
C4 O4P PLC sing 320 n n 
C4 H41 PLC sing 321 n n 
C4 H42 PLC sing 322 n n 
C5 N PLC sing 323 n n 
C5 H51 PLC sing 324 n n 
C5 H52 PLC sing 325 n n 
C6 N PLC sing 326 n n 
C6 H61 PLC sing 327 n n 
C6 H62 PLC sing 328 n n 
C6 H63 PLC sing 329 n n 
C7 N PLC sing 330 n n 
C7 H71 PLC sing 331 n n 
C7 H72 PLC sing 332 n n 
C7 H73 PLC sing 333 n n 
C8 N PLC sing 334 n n 
C8 H81 PLC sing 335 n n 
C8 H82 PLC sing 336 n n 
C8 H83 PLC sing 337 n n 
C' C1' PLC sing 338 n n 
C' O' PLC doub 339 n n 
C' O2 PLC sing 340 n n 
C1' C2' PLC sing 341 n n 
C1' "H1'1" PLC sing 342 n n 
C1' "H1'2" PLC sing 343 n n 
C2' C3' PLC sing 344 n n 
C2' "H2'1" PLC sing 345 n n 
C2' "H2'2" PLC sing 346 n n 
C3' C4' PLC sing 347 n n 
C3' "H3'1" PLC sing 348 n n 
C3' "H3'2" PLC sing 349 n n 
C4' C5' PLC sing 350 n n 
C4' "H4'1" PLC sing 351 n n 
C4' "H4'2" PLC sing 352 n n 
C5' C6' PLC sing 353 n n 
C5' "H5'1" PLC sing 354 n n 
C5' "H5'2" PLC sing 355 n n 
C6' C7' PLC sing 356 n n 
C6' "H6'1" PLC sing 357 n n 
C6' "H6'2" PLC sing 358 n n 
C7' C8' PLC sing 359 n n 
C7' "H7'1" PLC sing 360 n n 
C7' "H7'2" PLC sing 361 n n 
C8' C9' PLC sing 362 n n 
C8' "H8'1" PLC sing 363 n n 
C8' "H8'2" PLC sing 364 n n 
C9' CA' PLC sing 365 n n 
C9' "H9'1" PLC sing 366 n n 
C9' "H9'2" PLC sing 367 n n 
CA' CB' PLC sing 368 n n 
CA' "HT'1" PLC sing 369 n n 
CA' "HT'2" PLC sing 370 n n 
CB' "HE'1" PLC sing 371 n n 
CB' "HE'2" PLC sing 372 n n 
CB' "HE'3" PLC sing 373 n n 
CB C1B PLC sing 374 n n 
CB OB PLC doub 375 n n 
CB O3 PLC sing 376 n n 
C1B C2B PLC sing 377 n n 
C1B H1A1 PLC sing 378 n n 
C1B H1A2 PLC sing 379 n n 
C2B C3B PLC sing 380 n n 
C2B H2A1 PLC sing 381 n n 
C2B H2A2 PLC sing 382 n n 
C3B C4B PLC sing 383 n n 
C3B H3A1 PLC sing 384 n n 
C3B H3A2 PLC sing 385 n n 
C4B C5B PLC sing 386 n n 
C4B H4A1 PLC sing 387 n n 
C4B H4A2 PLC sing 388 n n 
C5B C6B PLC sing 389 n n 
C5B H5A1 PLC sing 390 n n 
C5B H5A2 PLC sing 391 n n 
C6B C7B PLC sing 392 n n 
C6B H6A1 PLC sing 393 n n 
C6B H6A2 PLC sing 394 n n 
C7B C8B PLC sing 395 n n 
C7B H7A1 PLC sing 396 n n 
C7B H7A2 PLC sing 397 n n 
C8B C9B PLC sing 398 n n 
C8B H8A1 PLC sing 399 n n 
C8B H8A2 PLC sing 400 n n 
C9B CAA PLC sing 401 n n 
C9B H9A1 PLC sing 402 n n 
C9B H9A2 PLC sing 403 n n 
CAA CBA PLC sing 404 n n 
CAA HTA1 PLC sing 405 n n 
CAA HTA2 PLC sing 406 n n 
CBA HEA1 PLC sing 407 n n 
CBA HEA2 PLC sing 408 n n 
CBA HEA3 PLC sing 409 n n 
O1P P PLC doub 410 n n 
O2P P PLC sing 411 n n 
O2P HOP2 PLC sing 412 n n 
O3P P PLC sing 413 n n 
O4P P PLC sing 414 n n 
#
_atom_sites.entry_id                     1LPA 
_atom_sites.fract_transf_matrix[1][1]    0.007496 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007496 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010799 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 BNG B 1 450 1 BNG BNG . 
D 4 CA B 1 451 1 CA CA . 
E 5 PLC B 1 452 1 PLC PLC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLC . . . E 5 10.407 23.489 47.8 1 46.64 ? C1 PLC 452 B 1 
HETATM 2 C C2 PLC . . . E 5 10.892 24.769 47.031 1 36.32 ? C2 PLC 452 B 1 
HETATM 3 C C3 PLC . . . E 5 11.099 25.755 48.193 1 35.48 ? C3 PLC 452 B 1 
HETATM 4 C C4 PLC . . . E 5 10.635 19.402 50.328 1 55.17 ? C4 PLC 452 B 1 
HETATM 5 C C5 PLC . . . E 5 11.636 18.507 49.551 1 61.52 ? C5 PLC 452 B 1 
HETATM 6 C C6 PLC . . . E 5 13.608 19.286 50.675 1 60.56 ? C6 PLC 452 B 1 
HETATM 7 C C7 PLC . . . E 5 13.8 17.993 48.663 1 57.83 ? C7 PLC 452 B 1 
HETATM 8 C C8 PLC . . . E 5 12.975 20.243 48.575 1 62.78 ? C8 PLC 452 B 1 
HETATM 9 C C' PLC . . . E 5 11.973 23.303 45.42 1 31.7 ? C' PLC 452 B 1 
HETATM 10 C C1' PLC . . . E 5 12.225 21.943 46.158 1 22.18 ? C1' PLC 452 B 1 
HETATM 11 C C2' PLC . . . E 5 12.711 21.003 45.039 1 18.23 ? C2' PLC 452 B 1 
HETATM 12 C C3' PLC . . . E 5 13.761 20.012 45.523 1 20.66 ? C3' PLC 452 B 1 
HETATM 13 C C4' PLC . . . E 5 13.586 18.927 44.464 1 27.71 ? C4' PLC 452 B 1 
HETATM 14 C C5' PLC . . . E 5 14.274 17.601 44.845 1 38.35 ? C5' PLC 452 B 1 
HETATM 15 C C6' PLC . . . E 5 15.441 17.479 43.815 1 46.85 ? C6' PLC 452 B 1 
HETATM 16 C C7' PLC . . . E 5 16.529 16.39 44.117 1 48.69 ? C7' PLC 452 B 1 
HETATM 17 C C8' PLC . . . E 5 17.795 16.569 43.199 1 50.33 ? C8' PLC 452 B 1 
HETATM 18 C C9' PLC . . . E 5 17.626 16.547 41.625 1 50.54 ? C9' PLC 452 B 1 
HETATM 19 C CA' PLC . . . E 5 17.249 15.212 40.89 1 42.59 ? CA' PLC 452 B 1 
HETATM 20 C CB' PLC . . . E 5 17.683 15.398 39.404 1 40.8 ? CB' PLC 452 B 1 
HETATM 21 C CB PLC . . . E 5 10.213 26.667 50.151 1 39.33 ? CB PLC 452 B 1 
HETATM 22 C C1B PLC . . . E 5 9.822 25.513 51.097 1 38.48 ? C1B PLC 452 B 1 
HETATM 23 C C2B PLC . . . E 5 8.482 25.871 51.726 1 28.65 ? C2B PLC 452 B 1 
HETATM 24 C C3B PLC . . . E 5 8.875 25.976 53.184 1 26.18 ? C3B PLC 452 B 1 
HETATM 25 C C4B PLC . . . E 5 8.549 24.629 53.857 1 30.79 ? C4B PLC 452 B 1 
HETATM 26 C C5B PLC . . . E 5 9.17 23.409 53.129 1 33.81 ? C5B PLC 452 B 1 
HETATM 27 C C6B PLC . . . E 5 9.144 22.212 54.103 1 33.57 ? C6B PLC 452 B 1 
HETATM 28 C C7B PLC . . . E 5 10.476 22.209 54.878 1 33.13 ? C7B PLC 452 B 1 
HETATM 29 C C8B PLC . . . E 5 10.272 21.289 56.075 1 34.23 ? C8B PLC 452 B 1 
HETATM 30 C C9B PLC . . . E 5 10.305 19.833 55.586 1 40.93 ? C9B PLC 452 B 1 
HETATM 31 C CAA PLC . . . E 5 9.461 19.001 56.598 1 49.84 ? CAA PLC 452 B 1 
HETATM 32 C CBA PLC . . . E 5 9.074 17.607 56.017 1 52.94 ? CBA PLC 452 B 1 
HETATM 33 O O' PLC . . . E 5 11.809 23.274 44.2 1 37.77 ? O' PLC 452 B 1 
HETATM 34 O OB PLC . . . E 5 10.696 27.735 50.592 1 40.4 ? OB PLC 452 B 1 
HETATM 35 O O2 PLC . . . E 5 11.939 24.61 46.099 1 33.56 ? O2 PLC 452 B 1 
HETATM 36 O O3 PLC . . . E 5 9.992 26.502 48.742 1 36.6 ? O3 PLC 452 B 1 
HETATM 37 O O1P PLC . . . E 5 11.138 21.846 51.249 1 56.93 ? O1P PLC 452 B 1 
HETATM 38 O O2P PLC . . . E 5 9.051 22.575 50.088 1 58.48 ? O2P PLC 452 B 1 
HETATM 39 O O3P PLC . . . E 5 11.242 22.883 48.827 1 52.84 ? O3P PLC 452 B 1 
HETATM 40 O O4P PLC . . . E 5 10.278 20.443 49.413 1 54.78 ? O4P PLC 452 B 1 
HETATM 41 N N PLC . . . E 5 13.012 19.009 49.371 1 62.63 ? N PLC 452 B 1 
HETATM 42 P P PLC . . . E 5 10.419 21.97 49.943 1 60.73 ? P PLC 452 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           42 
#