data_1LR0 # _model_server_result.job_id '_vPte-vkOb1juZAp_M1lCA' _model_server_result.datetime_utc '2025-02-28 18:17:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lr0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 1LR0 # _exptl.entry_id 1LR0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1LR0 _cell.length_a 78.477 _cell.length_b 78.477 _cell.length_c 97.674 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LR0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 78.477 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 39.2385 67.963076 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 51 A GLY 51 1_555 A N MSE 52 A MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C MSE 52 A MSE 52 1_555 A N SER 53 A SER 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale3 A C GLU 59 A GLU 59 1_555 A N MSE 60 A MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 60 A MSE 60 1_555 A N LEU 61 A LEU 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C GLU 96 A GLU 96 1_555 A N MSE 97 A MSE 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 A C MSE 97 A MSE 97 1_555 A N GLN 98 A GLN 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? metalc ? metalc1 A NE2 HIS 125 A HIS 125 1_555 B ZN ZN . A ZN 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc2 B ZN ZN . A ZN 130 1_555 E O HOH . A HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 340 n n C C2 TRS sing 341 n n C C3 TRS sing 342 n n C N TRS sing 343 n n C1 O1 TRS sing 344 n n C1 H11 TRS sing 345 n n C1 H12 TRS sing 346 n n C2 O2 TRS sing 347 n n C2 H21 TRS sing 348 n n C2 H22 TRS sing 349 n n C3 O3 TRS sing 350 n n C3 H31 TRS sing 351 n n C3 H32 TRS sing 352 n n N HN1 TRS sing 353 n n N HN2 TRS sing 354 n n N HN3 TRS sing 355 n n O1 HO1 TRS sing 356 n n O2 HO2 TRS sing 357 n n O3 HO3 TRS sing 358 n n # _atom_sites.entry_id 1LR0 _atom_sites.fract_transf_matrix[1][1] 0.012743 _atom_sites.fract_transf_matrix[1][2] 0.007357 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014714 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 130 129 ZN ZN . C 2 ZN A 1 131 130 ZN ZN . D 3 TRS A 1 303 3 TRS TRS . E 4 HOH A 1 304 2 HOH HOH . E 4 HOH A 2 305 3 HOH HOH . E 4 HOH A 3 306 4 HOH HOH . E 4 HOH A 4 307 5 HOH HOH . E 4 HOH A 5 308 6 HOH HOH . E 4 HOH A 6 309 7 HOH HOH . E 4 HOH A 7 310 8 HOH HOH . E 4 HOH A 8 311 9 HOH HOH . E 4 HOH A 9 312 10 HOH HOH . E 4 HOH A 10 313 11 HOH HOH . E 4 HOH A 11 314 12 HOH HOH . E 4 HOH A 12 315 13 HOH HOH . E 4 HOH A 13 316 14 HOH HOH . E 4 HOH A 14 317 15 HOH HOH . E 4 HOH A 15 318 16 HOH HOH . E 4 HOH A 16 319 17 HOH HOH . E 4 HOH A 17 320 18 HOH HOH . E 4 HOH A 18 321 19 HOH HOH . E 4 HOH A 19 322 20 HOH HOH . E 4 HOH A 20 323 21 HOH HOH . E 4 HOH A 21 324 22 HOH HOH . E 4 HOH A 22 325 23 HOH HOH . E 4 HOH A 23 326 24 HOH HOH . E 4 HOH A 24 327 25 HOH HOH . E 4 HOH A 25 328 26 HOH HOH . E 4 HOH A 26 329 27 HOH HOH . E 4 HOH A 27 330 28 HOH HOH . E 4 HOH A 28 331 29 HOH HOH . E 4 HOH A 29 332 30 HOH HOH . E 4 HOH A 30 333 31 HOH HOH . E 4 HOH A 31 334 32 HOH HOH . E 4 HOH A 32 335 33 HOH HOH . E 4 HOH A 33 336 34 HOH HOH . E 4 HOH A 34 337 35 HOH HOH . E 4 HOH A 35 338 36 HOH HOH . E 4 HOH A 36 339 37 HOH HOH . E 4 HOH A 37 340 38 HOH HOH . E 4 HOH A 38 341 39 HOH HOH . E 4 HOH A 39 342 40 HOH HOH . E 4 HOH A 40 343 41 HOH HOH . E 4 HOH A 41 344 42 HOH HOH . E 4 HOH A 42 345 43 HOH HOH . E 4 HOH A 43 346 44 HOH HOH . E 4 HOH A 44 347 45 HOH HOH . E 4 HOH A 45 348 46 HOH HOH . E 4 HOH A 46 349 47 HOH HOH . E 4 HOH A 47 350 48 HOH HOH . E 4 HOH A 48 351 49 HOH HOH . E 4 HOH A 49 352 50 HOH HOH . E 4 HOH A 50 353 51 HOH HOH . E 4 HOH A 51 354 52 HOH HOH . E 4 HOH A 52 355 53 HOH HOH . E 4 HOH A 53 356 54 HOH HOH . E 4 HOH A 54 357 55 HOH HOH . E 4 HOH A 55 358 56 HOH HOH . E 4 HOH A 56 359 57 HOH HOH . E 4 HOH A 57 360 58 HOH HOH . E 4 HOH A 58 361 59 HOH HOH . E 4 HOH A 59 362 60 HOH HOH . E 4 HOH A 60 363 61 HOH HOH . E 4 HOH A 61 364 62 HOH HOH . E 4 HOH A 62 365 63 HOH HOH . E 4 HOH A 63 366 64 HOH HOH . E 4 HOH A 64 367 65 HOH HOH . E 4 HOH A 65 368 66 HOH HOH . E 4 HOH A 66 369 67 HOH HOH . E 4 HOH A 67 370 68 HOH HOH . E 4 HOH A 68 371 69 HOH HOH . E 4 HOH A 69 372 71 HOH HOH . E 4 HOH A 70 373 72 HOH HOH . E 4 HOH A 71 374 73 HOH HOH . E 4 HOH A 72 375 74 HOH HOH . E 4 HOH A 73 376 75 HOH HOH . E 4 HOH A 74 377 76 HOH HOH . E 4 HOH A 75 378 77 HOH HOH . E 4 HOH A 76 379 78 HOH HOH . E 4 HOH A 77 380 79 HOH HOH . E 4 HOH A 78 381 80 HOH HOH . E 4 HOH A 79 382 81 HOH HOH . E 4 HOH A 80 383 82 HOH HOH . E 4 HOH A 81 384 84 HOH HOH . E 4 HOH A 82 385 85 HOH HOH . E 4 HOH A 83 386 86 HOH HOH . E 4 HOH A 84 387 88 HOH HOH . E 4 HOH A 85 388 89 HOH HOH . E 4 HOH A 86 389 90 HOH HOH . E 4 HOH A 87 390 91 HOH HOH . E 4 HOH A 88 391 92 HOH HOH . E 4 HOH A 89 392 93 HOH HOH . E 4 HOH A 90 393 95 HOH HOH . E 4 HOH A 91 394 96 HOH HOH . E 4 HOH A 92 395 97 HOH HOH . E 4 HOH A 93 396 98 HOH HOH . E 4 HOH A 94 397 99 HOH HOH . E 4 HOH A 95 398 100 HOH HOH . E 4 HOH A 96 399 101 HOH HOH . E 4 HOH A 97 400 102 HOH HOH . E 4 HOH A 98 401 103 HOH HOH . E 4 HOH A 99 402 104 HOH HOH . E 4 HOH A 100 403 105 HOH HOH . E 4 HOH A 101 404 106 HOH HOH . E 4 HOH A 102 405 107 HOH HOH . E 4 HOH A 103 406 108 HOH HOH . E 4 HOH A 104 407 109 HOH HOH . E 4 HOH A 105 408 110 HOH HOH . E 4 HOH A 106 409 112 HOH HOH . E 4 HOH A 107 410 113 HOH HOH . E 4 HOH A 108 411 115 HOH HOH . E 4 HOH A 109 412 116 HOH HOH . E 4 HOH A 110 413 117 HOH HOH . E 4 HOH A 111 414 119 HOH HOH . E 4 HOH A 112 415 122 HOH HOH . E 4 HOH A 113 416 123 HOH HOH . E 4 HOH A 114 417 124 HOH HOH . E 4 HOH A 115 418 126 HOH HOH . E 4 HOH A 116 419 129 HOH HOH . E 4 HOH A 117 420 133 HOH HOH . E 4 HOH A 118 421 134 HOH HOH . E 4 HOH A 119 422 135 HOH HOH . E 4 HOH A 120 423 136 HOH HOH . E 4 HOH A 121 424 137 HOH HOH . E 4 HOH A 122 425 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 3 39.069 22.414 66.978 0.33 9.09 ? C TRS 303 A 1 HETATM 2 C C1 TRS . . . D 3 40.491 22.756 67.498 0.33 9.98 ? C1 TRS 303 A 1 HETATM 3 C C2 TRS . . . D 3 38.118 23.48 67.576 0.33 9.39 ? C2 TRS 303 A 1 HETATM 4 C C3 TRS . . . D 3 38.679 21.091 67.659 0.33 8.28 ? C3 TRS 303 A 1 HETATM 5 N N TRS . . . D 3 38.925 22.199 65.539 0.33 7.05 ? N TRS 303 A 1 HETATM 6 O O1 TRS . . . D 3 41.002 23.957 66.917 0.33 10.73 ? O1 TRS 303 A 1 HETATM 7 O O2 TRS . . . D 3 36.804 23.373 67.013 0.33 7.46 ? O2 TRS 303 A 1 HETATM 8 O O3 TRS . . . D 3 39.388 20.023 67.036 0.33 9.64 ? O3 TRS 303 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #