data_1LR4 # _model_server_result.job_id Z18odF1xms73uiJ_dBmJFg _model_server_result.datetime_utc '2024-10-12 21:21:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lr4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 1LR4 # _exptl.entry_id 1LR4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 120.152 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BENZAMIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.06 _cell.angle_gamma 90 _cell.entry_id 1LR4 _cell.length_a 142.55 _cell.length_b 61.44 _cell.length_c 45.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LR4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H8 N2' _chem_comp.formula_weight 120.152 _chem_comp.id BEN _chem_comp.mon_nstd_flag . _chem_comp.name BENZAMIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BEN doub 70 n y C1 C6 BEN sing 71 n y C1 C BEN sing 72 n n C2 C3 BEN sing 73 n y C2 H2 BEN sing 74 n n C3 C4 BEN doub 75 n y C3 H3 BEN sing 76 n n C4 C5 BEN sing 77 n y C4 H4 BEN sing 78 n n C5 C6 BEN doub 79 n y C5 H5 BEN sing 80 n n C6 H6 BEN sing 81 n n C N1 BEN doub 82 e n C N2 BEN sing 83 n n N1 HN1 BEN sing 84 n n N2 HN21 BEN sing 85 n n N2 HN22 BEN sing 86 n n # _atom_sites.entry_id 1LR4 _atom_sites.fract_transf_matrix[1][1] 0.007015 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001627 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016276 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BEN A 1 1001 1 BEN BZA . C 3 HOH A 1 1002 1 HOH HOH . C 3 HOH A 2 1003 2 HOH HOH . C 3 HOH A 3 1004 3 HOH HOH . C 3 HOH A 4 1005 4 HOH HOH . C 3 HOH A 5 1006 5 HOH HOH . C 3 HOH A 6 1007 6 HOH HOH . C 3 HOH A 7 1008 7 HOH HOH . C 3 HOH A 8 1009 8 HOH HOH . C 3 HOH A 9 1010 9 HOH HOH . C 3 HOH A 10 1011 10 HOH HOH . C 3 HOH A 11 1012 11 HOH HOH . C 3 HOH A 12 1013 12 HOH HOH . C 3 HOH A 13 1014 13 HOH HOH . C 3 HOH A 14 1015 14 HOH HOH . C 3 HOH A 15 1016 15 HOH HOH . C 3 HOH A 16 1017 16 HOH HOH . C 3 HOH A 17 1018 17 HOH HOH . C 3 HOH A 18 1019 18 HOH HOH . C 3 HOH A 19 1020 19 HOH HOH . C 3 HOH A 20 1021 20 HOH HOH . C 3 HOH A 21 1022 21 HOH HOH . C 3 HOH A 22 1023 22 HOH HOH . C 3 HOH A 23 1024 23 HOH HOH . C 3 HOH A 24 1025 24 HOH HOH . C 3 HOH A 25 1026 25 HOH HOH . C 3 HOH A 26 1027 26 HOH HOH . C 3 HOH A 27 1028 27 HOH HOH . C 3 HOH A 28 1029 28 HOH HOH . C 3 HOH A 29 1030 29 HOH HOH . C 3 HOH A 30 1031 30 HOH HOH . C 3 HOH A 31 1032 31 HOH HOH . C 3 HOH A 32 1033 32 HOH HOH . C 3 HOH A 33 1034 33 HOH HOH . C 3 HOH A 34 1035 34 HOH HOH . C 3 HOH A 35 1036 35 HOH HOH . C 3 HOH A 36 1037 36 HOH HOH . C 3 HOH A 37 1038 37 HOH HOH . C 3 HOH A 38 1039 38 HOH HOH . C 3 HOH A 39 1040 39 HOH HOH . C 3 HOH A 40 1041 40 HOH HOH . C 3 HOH A 41 1042 41 HOH HOH . C 3 HOH A 42 1043 42 HOH HOH . C 3 HOH A 43 1044 43 HOH HOH . C 3 HOH A 44 1045 44 HOH HOH . C 3 HOH A 45 1046 45 HOH HOH . C 3 HOH A 46 1047 46 HOH HOH . C 3 HOH A 47 1048 47 HOH HOH . C 3 HOH A 48 1049 48 HOH HOH . C 3 HOH A 49 1050 49 HOH HOH . C 3 HOH A 50 1051 50 HOH HOH . C 3 HOH A 51 1052 51 HOH HOH . C 3 HOH A 52 1053 52 HOH HOH . C 3 HOH A 53 1054 53 HOH HOH . C 3 HOH A 54 1055 54 HOH HOH . C 3 HOH A 55 1056 55 HOH HOH . C 3 HOH A 56 1057 56 HOH HOH . C 3 HOH A 57 1058 57 HOH HOH . C 3 HOH A 58 1059 58 HOH HOH . C 3 HOH A 59 1060 59 HOH HOH . C 3 HOH A 60 1061 60 HOH HOH . C 3 HOH A 61 1062 61 HOH HOH . C 3 HOH A 62 1063 62 HOH HOH . C 3 HOH A 63 1064 63 HOH HOH . C 3 HOH A 64 1065 64 HOH HOH . C 3 HOH A 65 1066 65 HOH HOH . C 3 HOH A 66 1067 66 HOH HOH . C 3 HOH A 67 1068 67 HOH HOH . C 3 HOH A 68 1069 68 HOH HOH . C 3 HOH A 69 1070 69 HOH HOH . C 3 HOH A 70 1071 70 HOH HOH . C 3 HOH A 71 1072 71 HOH HOH . C 3 HOH A 72 1073 72 HOH HOH . C 3 HOH A 73 1074 73 HOH HOH . C 3 HOH A 74 1075 74 HOH HOH . C 3 HOH A 75 1076 75 HOH HOH . C 3 HOH A 76 1077 76 HOH HOH . C 3 HOH A 77 1078 77 HOH HOH . C 3 HOH A 78 1079 78 HOH HOH . C 3 HOH A 79 1080 79 HOH HOH . C 3 HOH A 80 1081 80 HOH HOH . C 3 HOH A 81 1082 81 HOH HOH . C 3 HOH A 82 1083 82 HOH HOH . C 3 HOH A 83 1084 83 HOH HOH . C 3 HOH A 84 1085 84 HOH HOH . C 3 HOH A 85 1086 85 HOH HOH . C 3 HOH A 86 1087 86 HOH HOH . C 3 HOH A 87 1088 87 HOH HOH . C 3 HOH A 88 1089 88 HOH HOH . C 3 HOH A 89 1090 89 HOH HOH . C 3 HOH A 90 1091 90 HOH HOH . C 3 HOH A 91 1092 91 HOH HOH . C 3 HOH A 92 1093 92 HOH HOH . C 3 HOH A 93 1094 93 HOH HOH . C 3 HOH A 94 1095 94 HOH HOH . C 3 HOH A 95 1096 95 HOH HOH . C 3 HOH A 96 1097 96 HOH HOH . C 3 HOH A 97 1098 97 HOH HOH . C 3 HOH A 98 1099 98 HOH HOH . C 3 HOH A 99 1100 99 HOH HOH . C 3 HOH A 100 1101 100 HOH HOH . C 3 HOH A 101 1102 101 HOH HOH . C 3 HOH A 102 1103 102 HOH HOH . C 3 HOH A 103 1104 103 HOH HOH . C 3 HOH A 104 1105 104 HOH HOH . C 3 HOH A 105 1106 105 HOH HOH . C 3 HOH A 106 1107 106 HOH HOH . C 3 HOH A 107 1108 107 HOH HOH . C 3 HOH A 108 1109 108 HOH HOH . C 3 HOH A 109 1110 109 HOH HOH . C 3 HOH A 110 1111 110 HOH HOH . C 3 HOH A 111 1112 111 HOH HOH . C 3 HOH A 112 1113 112 HOH HOH . C 3 HOH A 113 1114 113 HOH HOH . C 3 HOH A 114 1115 114 HOH HOH . C 3 HOH A 115 1116 115 HOH HOH . C 3 HOH A 116 1117 116 HOH HOH . C 3 HOH A 117 1118 117 HOH HOH . C 3 HOH A 118 1119 118 HOH HOH . C 3 HOH A 119 1120 119 HOH HOH . C 3 HOH A 120 1121 120 HOH HOH . C 3 HOH A 121 1122 121 HOH HOH . C 3 HOH A 122 1123 122 HOH HOH . C 3 HOH A 123 1124 123 HOH HOH . C 3 HOH A 124 1125 124 HOH HOH . C 3 HOH A 125 1126 125 HOH HOH . C 3 HOH A 126 1127 126 HOH HOH . C 3 HOH A 127 1128 127 HOH HOH . C 3 HOH A 128 1129 128 HOH HOH . C 3 HOH A 129 1130 129 HOH HOH . C 3 HOH A 130 1131 130 HOH HOH . C 3 HOH A 131 1132 131 HOH HOH . C 3 HOH A 132 1133 132 HOH HOH . C 3 HOH A 133 1134 133 HOH HOH . C 3 HOH A 134 1135 134 HOH HOH . C 3 HOH A 135 1136 135 HOH HOH . C 3 HOH A 136 1137 136 HOH HOH . C 3 HOH A 137 1138 137 HOH HOH . C 3 HOH A 138 1139 138 HOH HOH . C 3 HOH A 139 1140 139 HOH HOH . C 3 HOH A 140 1141 140 HOH HOH . C 3 HOH A 141 1142 141 HOH HOH . C 3 HOH A 142 1143 142 HOH HOH . C 3 HOH A 143 1144 143 HOH HOH . C 3 HOH A 144 1145 144 HOH HOH . C 3 HOH A 145 1146 145 HOH HOH . C 3 HOH A 146 1147 146 HOH HOH . C 3 HOH A 147 1148 147 HOH HOH . C 3 HOH A 148 1149 148 HOH HOH . C 3 HOH A 149 1150 149 HOH HOH . C 3 HOH A 150 1151 150 HOH HOH . C 3 HOH A 151 1152 151 HOH HOH . C 3 HOH A 152 1153 152 HOH HOH . C 3 HOH A 153 1154 153 HOH HOH . C 3 HOH A 154 1155 154 HOH HOH . C 3 HOH A 155 1156 155 HOH HOH . C 3 HOH A 156 1157 156 HOH HOH . C 3 HOH A 157 1158 157 HOH HOH . C 3 HOH A 158 1159 158 HOH HOH . C 3 HOH A 159 1160 159 HOH HOH . C 3 HOH A 160 1161 160 HOH HOH . C 3 HOH A 161 1162 161 HOH HOH . C 3 HOH A 162 1163 162 HOH HOH . C 3 HOH A 163 1164 163 HOH HOH . C 3 HOH A 164 1165 164 HOH HOH . C 3 HOH A 165 1166 165 HOH HOH . C 3 HOH A 166 1167 166 HOH HOH . C 3 HOH A 167 1168 167 HOH HOH . C 3 HOH A 168 1169 168 HOH HOH . C 3 HOH A 169 1170 169 HOH HOH . C 3 HOH A 170 1171 170 HOH HOH . C 3 HOH A 171 1172 171 HOH HOH . C 3 HOH A 172 1173 172 HOH HOH . C 3 HOH A 173 1174 173 HOH HOH . C 3 HOH A 174 1175 174 HOH HOH . C 3 HOH A 175 1176 175 HOH HOH . C 3 HOH A 176 1177 176 HOH HOH . C 3 HOH A 177 1178 177 HOH HOH . C 3 HOH A 178 1179 178 HOH HOH . C 3 HOH A 179 1180 179 HOH HOH . C 3 HOH A 180 1181 180 HOH HOH . C 3 HOH A 181 1182 181 HOH HOH . C 3 HOH A 182 1183 182 HOH HOH . C 3 HOH A 183 1184 183 HOH HOH . C 3 HOH A 184 1185 184 HOH HOH . C 3 HOH A 185 1186 185 HOH HOH . C 3 HOH A 186 1187 186 HOH HOH . C 3 HOH A 187 1188 187 HOH HOH . C 3 HOH A 188 1189 188 HOH HOH . C 3 HOH A 189 1190 189 HOH HOH . C 3 HOH A 190 1191 190 HOH HOH . C 3 HOH A 191 1192 191 HOH HOH . C 3 HOH A 192 1193 192 HOH HOH . C 3 HOH A 193 1194 193 HOH HOH . C 3 HOH A 194 1195 194 HOH HOH . C 3 HOH A 195 1196 195 HOH HOH . C 3 HOH A 196 1197 196 HOH HOH . C 3 HOH A 197 1198 197 HOH HOH . C 3 HOH A 198 1199 198 HOH HOH . C 3 HOH A 199 1200 199 HOH HOH . C 3 HOH A 200 1201 200 HOH HOH . C 3 HOH A 201 1202 201 HOH HOH . C 3 HOH A 202 1203 202 HOH HOH . C 3 HOH A 203 1204 203 HOH HOH . C 3 HOH A 204 1205 204 HOH HOH . C 3 HOH A 205 1206 205 HOH HOH . C 3 HOH A 206 1207 206 HOH HOH . C 3 HOH A 207 1208 207 HOH HOH . C 3 HOH A 208 1209 208 HOH HOH . C 3 HOH A 209 1210 209 HOH HOH . C 3 HOH A 210 1211 210 HOH HOH . C 3 HOH A 211 1212 211 HOH HOH . C 3 HOH A 212 1213 212 HOH HOH . C 3 HOH A 213 1214 213 HOH HOH . C 3 HOH A 214 1215 214 HOH HOH . C 3 HOH A 215 1216 215 HOH HOH . C 3 HOH A 216 1217 216 HOH HOH . C 3 HOH A 217 1218 217 HOH HOH . C 3 HOH A 218 1219 218 HOH HOH . C 3 HOH A 219 1220 219 HOH HOH . C 3 HOH A 220 1221 220 HOH HOH . C 3 HOH A 221 1222 221 HOH HOH . C 3 HOH A 222 1223 222 HOH HOH . C 3 HOH A 223 1224 223 HOH HOH . C 3 HOH A 224 1225 224 HOH HOH . C 3 HOH A 225 1226 225 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BEN . . . B 2 23.531 8 15.956 1 33.56 ? C1 BEN 1001 A 1 HETATM 2 C C2 BEN . . . B 2 22.947 9.245 15.768 1 32.43 ? C2 BEN 1001 A 1 HETATM 3 C C3 BEN . . . B 2 22.305 9.867 16.821 1 36.94 ? C3 BEN 1001 A 1 HETATM 4 C C4 BEN . . . B 2 22.25 9.264 18.082 1 37.21 ? C4 BEN 1001 A 1 HETATM 5 C C5 BEN . . . B 2 22.831 8.023 18.297 1 36.27 ? C5 BEN 1001 A 1 HETATM 6 C C6 BEN . . . B 2 23.474 7.393 17.231 1 35.78 ? C6 BEN 1001 A 1 HETATM 7 C C BEN . . . B 2 24.149 7.37 14.856 1 28.08 ? C BEN 1001 A 1 HETATM 8 N N1 BEN . . . B 2 25.016 6.466 14.958 1 25 ? N1 BEN 1001 A 1 HETATM 9 N N2 BEN . . . B 2 23.825 7.73 13.725 1 21.08 ? N2 BEN 1001 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #