data_1LRQ # _model_server_result.job_id d6bWreaBttT0EVPMbl3sjw _model_server_result.datetime_utc '2024-11-23 14:10:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lrq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2270}' # _entry.id 1LRQ # _exptl.entry_id 1LRQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1LRQ _cell.length_a 84.471 _cell.length_b 84.471 _cell.length_c 160.481 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LRQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 11 A CYS 1011 1_555 C CD CD . A CD 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc2 A OE2 GLU 222 A GLU 1222 1_555 C CD CD . A CD 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc3 A OE1 GLU 222 A GLU 1222 1_555 C CD CD . A CD 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc4 A OD2 ASP 233 A ASP 1233 1_555 C CD CD . A CD 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc5 D O1 PEP . A PEP 1268 1_555 C CD CD . A CD 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc6 D O2' PEP . A PEP 1268 1_555 C CD CD . A CD 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? metalc ? metalc7 J O HOH . B HOH 247 1_555 H CD CD . B CD 2270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc8 B SG CYS 11 B CYS 2011 1_555 H CD CD . B CD 2270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc9 B OE1 GLU 222 B GLU 2222 1_555 H CD CD . B CD 2270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc10 B OE2 GLU 222 B GLU 2222 1_555 H CD CD . B CD 2270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc11 B OD2 ASP 233 B ASP 2233 1_555 H CD CD . B CD 2270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1LRQ _atom_sites.fract_transf_matrix[1][1] 0.011838 _atom_sites.fract_transf_matrix[1][2] 0.006835 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01367 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006231 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 1270 1270 CD CD2 . D 3 PEP A 1 1268 1268 PEP PEP . E 4 A5P A 1 1269 1269 A5P A5P . F 5 PO4 B 1 2268 2268 PO4 PO4 . G 5 PO4 B 1 2269 2269 PO4 PO4 . H 2 CD B 1 2270 2270 CD CD2 . I 6 HOH A 1 1 1 HOH HOH . I 6 HOH A 2 2 2 HOH HOH . I 6 HOH A 3 4 4 HOH HOH . I 6 HOH A 4 5 5 HOH HOH . I 6 HOH A 5 10 10 HOH HOH . I 6 HOH A 6 11 11 HOH HOH . I 6 HOH A 7 12 12 HOH HOH . I 6 HOH A 8 15 15 HOH HOH . I 6 HOH A 9 16 16 HOH HOH . I 6 HOH A 10 18 18 HOH HOH . I 6 HOH A 11 20 20 HOH HOH . I 6 HOH A 12 21 21 HOH HOH . I 6 HOH A 13 22 22 HOH HOH . I 6 HOH A 14 23 23 HOH HOH . I 6 HOH A 15 24 24 HOH HOH . I 6 HOH A 16 26 26 HOH HOH . I 6 HOH A 17 27 27 HOH HOH . I 6 HOH A 18 32 32 HOH HOH . I 6 HOH A 19 34 34 HOH HOH . I 6 HOH A 20 35 35 HOH HOH . I 6 HOH A 21 37 37 HOH HOH . I 6 HOH A 22 38 38 HOH HOH . I 6 HOH A 23 40 40 HOH HOH . I 6 HOH A 24 41 41 HOH HOH . I 6 HOH A 25 42 42 HOH HOH . I 6 HOH A 26 44 44 HOH HOH . I 6 HOH A 27 46 46 HOH HOH . I 6 HOH A 28 48 48 HOH HOH . I 6 HOH A 29 49 49 HOH HOH . I 6 HOH A 30 51 51 HOH HOH . I 6 HOH A 31 56 56 HOH HOH . I 6 HOH A 32 57 57 HOH HOH . I 6 HOH A 33 58 58 HOH HOH . I 6 HOH A 34 59 59 HOH HOH . I 6 HOH A 35 60 60 HOH HOH . I 6 HOH A 36 62 62 HOH HOH . I 6 HOH A 37 63 63 HOH HOH . I 6 HOH A 38 64 64 HOH HOH . I 6 HOH A 39 65 65 HOH HOH . I 6 HOH A 40 68 68 HOH HOH . I 6 HOH A 41 72 72 HOH HOH . I 6 HOH A 42 73 73 HOH HOH . I 6 HOH A 43 74 74 HOH HOH . I 6 HOH A 44 75 75 HOH HOH . I 6 HOH A 45 78 78 HOH HOH . I 6 HOH A 46 80 80 HOH HOH . I 6 HOH A 47 81 81 HOH HOH . I 6 HOH A 48 83 83 HOH HOH . I 6 HOH A 49 84 84 HOH HOH . I 6 HOH A 50 85 85 HOH HOH . I 6 HOH A 51 87 87 HOH HOH . I 6 HOH A 52 90 90 HOH HOH . I 6 HOH A 53 91 91 HOH HOH . I 6 HOH A 54 95 95 HOH HOH . I 6 HOH A 55 97 97 HOH HOH . I 6 HOH A 56 100 100 HOH HOH . I 6 HOH A 57 101 101 HOH HOH . I 6 HOH A 58 103 103 HOH HOH . I 6 HOH A 59 104 104 HOH HOH . I 6 HOH A 60 105 105 HOH HOH . I 6 HOH A 61 106 106 HOH HOH . I 6 HOH A 62 109 109 HOH HOH . I 6 HOH A 63 110 110 HOH HOH . I 6 HOH A 64 111 111 HOH HOH . I 6 HOH A 65 112 112 HOH HOH . I 6 HOH A 66 118 118 HOH HOH . I 6 HOH A 67 119 119 HOH HOH . I 6 HOH A 68 120 120 HOH HOH . I 6 HOH A 69 121 121 HOH HOH . I 6 HOH A 70 123 123 HOH HOH . I 6 HOH A 71 124 124 HOH HOH . I 6 HOH A 72 126 126 HOH HOH . I 6 HOH A 73 128 128 HOH HOH . I 6 HOH A 74 132 132 HOH HOH . I 6 HOH A 75 133 133 HOH HOH . I 6 HOH A 76 135 135 HOH HOH . I 6 HOH A 77 136 136 HOH HOH . I 6 HOH A 78 137 137 HOH HOH . I 6 HOH A 79 140 140 HOH HOH . I 6 HOH A 80 146 146 HOH HOH . I 6 HOH A 81 148 148 HOH HOH . I 6 HOH A 82 149 149 HOH HOH . I 6 HOH A 83 151 151 HOH HOH . I 6 HOH A 84 152 152 HOH HOH . I 6 HOH A 85 156 156 HOH HOH . I 6 HOH A 86 163 163 HOH HOH . I 6 HOH A 87 166 166 HOH HOH . I 6 HOH A 88 167 167 HOH HOH . I 6 HOH A 89 168 168 HOH HOH . I 6 HOH A 90 171 171 HOH HOH . I 6 HOH A 91 174 174 HOH HOH . I 6 HOH A 92 175 175 HOH HOH . I 6 HOH A 93 176 176 HOH HOH . I 6 HOH A 94 180 180 HOH HOH . I 6 HOH A 95 181 181 HOH HOH . I 6 HOH A 96 183 183 HOH HOH . I 6 HOH A 97 185 185 HOH HOH . I 6 HOH A 98 186 186 HOH HOH . I 6 HOH A 99 189 189 HOH HOH . I 6 HOH A 100 191 191 HOH HOH . I 6 HOH A 101 193 193 HOH HOH . I 6 HOH A 102 194 194 HOH HOH . I 6 HOH A 103 195 195 HOH HOH . I 6 HOH A 104 196 196 HOH HOH . I 6 HOH A 105 197 197 HOH HOH . I 6 HOH A 106 198 198 HOH HOH . I 6 HOH A 107 199 199 HOH HOH . I 6 HOH A 108 201 201 HOH HOH . I 6 HOH A 109 202 202 HOH HOH . I 6 HOH A 110 203 203 HOH HOH . I 6 HOH A 111 204 204 HOH HOH . I 6 HOH A 112 208 208 HOH HOH . I 6 HOH A 113 210 210 HOH HOH . I 6 HOH A 114 211 211 HOH HOH . I 6 HOH A 115 212 212 HOH HOH . I 6 HOH A 116 213 213 HOH HOH . I 6 HOH A 117 217 217 HOH HOH . I 6 HOH A 118 218 218 HOH HOH . I 6 HOH A 119 219 219 HOH HOH . I 6 HOH A 120 221 221 HOH HOH . I 6 HOH A 121 222 222 HOH HOH . I 6 HOH A 122 223 223 HOH HOH . I 6 HOH A 123 224 224 HOH HOH . I 6 HOH A 124 225 225 HOH HOH . I 6 HOH A 125 227 227 HOH HOH . I 6 HOH A 126 228 228 HOH HOH . I 6 HOH A 127 229 229 HOH HOH . I 6 HOH A 128 231 231 HOH HOH . I 6 HOH A 129 232 232 HOH HOH . I 6 HOH A 130 233 233 HOH HOH . I 6 HOH A 131 234 234 HOH HOH . I 6 HOH A 132 235 235 HOH HOH . I 6 HOH A 133 238 238 HOH HOH . I 6 HOH A 134 239 239 HOH HOH . I 6 HOH A 135 241 241 HOH HOH . I 6 HOH A 136 243 243 HOH HOH . I 6 HOH A 137 246 246 HOH HOH . I 6 HOH A 138 248 248 HOH HOH . I 6 HOH A 139 249 249 HOH HOH . I 6 HOH A 140 252 252 HOH HOH . I 6 HOH A 141 253 253 HOH HOH . I 6 HOH A 142 254 254 HOH HOH . J 6 HOH B 1 3 3 HOH HOH . J 6 HOH B 2 6 6 HOH HOH . J 6 HOH B 3 7 7 HOH HOH . J 6 HOH B 4 8 8 HOH HOH . J 6 HOH B 5 9 9 HOH HOH . J 6 HOH B 6 13 13 HOH HOH . J 6 HOH B 7 14 14 HOH HOH . J 6 HOH B 8 17 17 HOH HOH . J 6 HOH B 9 19 19 HOH HOH . J 6 HOH B 10 25 25 HOH HOH . J 6 HOH B 11 28 28 HOH HOH . J 6 HOH B 12 29 29 HOH HOH . J 6 HOH B 13 30 30 HOH HOH . J 6 HOH B 14 31 31 HOH HOH . J 6 HOH B 15 33 33 HOH HOH . J 6 HOH B 16 36 36 HOH HOH . J 6 HOH B 17 39 39 HOH HOH . J 6 HOH B 18 43 43 HOH HOH . J 6 HOH B 19 45 45 HOH HOH . J 6 HOH B 20 47 47 HOH HOH . J 6 HOH B 21 50 50 HOH HOH . J 6 HOH B 22 52 52 HOH HOH . J 6 HOH B 23 53 53 HOH HOH . J 6 HOH B 24 54 54 HOH HOH . J 6 HOH B 25 55 55 HOH HOH . J 6 HOH B 26 61 61 HOH HOH . J 6 HOH B 27 66 66 HOH HOH . J 6 HOH B 28 67 67 HOH HOH . J 6 HOH B 29 69 69 HOH HOH . J 6 HOH B 30 70 70 HOH HOH . J 6 HOH B 31 71 71 HOH HOH . J 6 HOH B 32 76 76 HOH HOH . J 6 HOH B 33 77 77 HOH HOH . J 6 HOH B 34 79 79 HOH HOH . J 6 HOH B 35 82 82 HOH HOH . J 6 HOH B 36 86 86 HOH HOH . J 6 HOH B 37 88 88 HOH HOH . J 6 HOH B 38 89 89 HOH HOH . J 6 HOH B 39 92 92 HOH HOH . J 6 HOH B 40 93 93 HOH HOH . J 6 HOH B 41 94 94 HOH HOH . J 6 HOH B 42 96 96 HOH HOH . J 6 HOH B 43 99 99 HOH HOH . J 6 HOH B 44 102 102 HOH HOH . J 6 HOH B 45 107 107 HOH HOH . J 6 HOH B 46 108 108 HOH HOH . J 6 HOH B 47 113 113 HOH HOH . J 6 HOH B 48 114 114 HOH HOH . J 6 HOH B 49 115 115 HOH HOH . J 6 HOH B 50 116 116 HOH HOH . J 6 HOH B 51 117 117 HOH HOH . J 6 HOH B 52 122 122 HOH HOH . J 6 HOH B 53 125 125 HOH HOH . J 6 HOH B 54 127 127 HOH HOH . J 6 HOH B 55 129 129 HOH HOH . J 6 HOH B 56 130 130 HOH HOH . J 6 HOH B 57 131 131 HOH HOH . J 6 HOH B 58 134 134 HOH HOH . J 6 HOH B 59 138 138 HOH HOH . J 6 HOH B 60 139 139 HOH HOH . J 6 HOH B 61 141 141 HOH HOH . J 6 HOH B 62 142 142 HOH HOH . J 6 HOH B 63 144 144 HOH HOH . J 6 HOH B 64 145 145 HOH HOH . J 6 HOH B 65 147 147 HOH HOH . J 6 HOH B 66 150 150 HOH HOH . J 6 HOH B 67 153 153 HOH HOH . J 6 HOH B 68 154 154 HOH HOH . J 6 HOH B 69 155 155 HOH HOH . J 6 HOH B 70 157 157 HOH HOH . J 6 HOH B 71 158 158 HOH HOH . J 6 HOH B 72 159 159 HOH HOH . J 6 HOH B 73 160 160 HOH HOH . J 6 HOH B 74 161 161 HOH HOH . J 6 HOH B 75 162 162 HOH HOH . J 6 HOH B 76 164 164 HOH HOH . J 6 HOH B 77 165 165 HOH HOH . J 6 HOH B 78 169 169 HOH HOH . J 6 HOH B 79 170 170 HOH HOH . J 6 HOH B 80 172 172 HOH HOH . J 6 HOH B 81 173 173 HOH HOH . J 6 HOH B 82 177 177 HOH HOH . J 6 HOH B 83 179 179 HOH HOH . J 6 HOH B 84 182 182 HOH HOH . J 6 HOH B 85 184 184 HOH HOH . J 6 HOH B 86 187 187 HOH HOH . J 6 HOH B 87 188 188 HOH HOH . J 6 HOH B 88 190 190 HOH HOH . J 6 HOH B 89 192 192 HOH HOH . J 6 HOH B 90 200 200 HOH HOH . J 6 HOH B 91 205 205 HOH HOH . J 6 HOH B 92 206 206 HOH HOH . J 6 HOH B 93 207 207 HOH HOH . J 6 HOH B 94 209 209 HOH HOH . J 6 HOH B 95 214 214 HOH HOH . J 6 HOH B 96 215 215 HOH HOH . J 6 HOH B 97 216 216 HOH HOH . J 6 HOH B 98 220 220 HOH HOH . J 6 HOH B 99 226 226 HOH HOH . J 6 HOH B 100 230 230 HOH HOH . J 6 HOH B 101 237 237 HOH HOH . J 6 HOH B 102 240 240 HOH HOH . J 6 HOH B 103 242 242 HOH HOH . J 6 HOH B 104 244 244 HOH HOH . J 6 HOH B 105 245 245 HOH HOH . J 6 HOH B 106 247 247 HOH HOH . J 6 HOH B 107 250 250 HOH HOH . J 6 HOH B 108 251 251 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x 39.323 _atom_site.Cartn_y 28.337 _atom_site.Cartn_z 7.446 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 30.03 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 2270 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 382 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 1 #