data_1LSP # _model_server_result.job_id 9OHtMFj4v1HXaHPW_s445A _model_server_result.datetime_utc '2024-11-09 02:51:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lsp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":295}' # _entry.id 1LSP # _exptl.entry_id 1LSP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 551.543 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BULGECIN A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LSP _cell.length_a 91.69 _cell.length_b 65.33 _cell.length_c 38.15 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LSP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 60 A CYS 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? disulf ? disulf2 A SG CYS 18 A CYS 18 1_555 A SG CYS 29 A CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? # _chem_comp.formula 'C16 H29 N3 O14 S2' _chem_comp.formula_weight 551.543 _chem_comp.id BUL _chem_comp.mon_nstd_flag . _chem_comp.name 'BULGECIN A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 BUL sing 70 n n O1 C6 BUL sing 71 n n C2 C3 BUL sing 72 n n C2 O20 BUL sing 73 n n C2 H2 BUL sing 74 n n C3 C4 BUL sing 75 n n C3 N16 BUL sing 76 n n C3 H3 BUL sing 77 n n C4 C5 BUL sing 78 n n C4 O15 BUL sing 79 n n C4 H4 BUL sing 80 n n C5 C6 BUL sing 81 n n C5 O14 BUL sing 82 n n C5 H5 BUL sing 83 n n C6 C12 BUL sing 84 n n C6 H6 BUL sing 85 n n N7 C8 BUL sing 86 n n N7 C11 BUL sing 87 n n N7 H7 BUL sing 88 n n C8 C9 BUL sing 89 n n C8 C23 BUL sing 90 n n C8 H8 BUL sing 91 n n C9 C10 BUL sing 92 n n C9 H91 BUL sing 93 n n C9 H92 BUL sing 94 n n C10 C11 BUL sing 95 n n C10 O20 BUL sing 96 n n C10 H10 BUL sing 97 n n C11 C21 BUL sing 98 n n C11 H11 BUL sing 99 n n C12 O13 BUL sing 100 n n C12 H121 BUL sing 101 n n C12 H122 BUL sing 102 n n O13 H13 BUL sing 103 n n O14 S32 BUL sing 104 n n O15 H15 BUL sing 105 n n N16 C17 BUL sing 106 n n N16 H16 BUL sing 107 n n C17 O18 BUL doub 108 n n C17 C19 BUL sing 109 n n C19 H191 BUL sing 110 n n C19 H192 BUL sing 111 n n C19 H193 BUL sing 112 n n C21 O22 BUL sing 113 n n C21 H211 BUL sing 114 n n C21 H212 BUL sing 115 n n O22 H22 BUL sing 116 n n C23 O24 BUL doub 117 n n C23 N25 BUL sing 118 n n N25 C26 BUL sing 119 n n N25 H25 BUL sing 120 n n C26 C27 BUL sing 121 n n C26 H261 BUL sing 122 n n C26 H262 BUL sing 123 n n C27 S28 BUL sing 124 n n C27 H271 BUL sing 125 n n C27 H272 BUL sing 126 n n S28 O29 BUL doub 127 n n S28 O30 BUL doub 128 n n S28 O31 BUL sing 129 n n O31 H31 BUL sing 130 n n S32 O33 BUL doub 131 n n S32 O34 BUL doub 132 n n S32 O35 BUL sing 133 n n O35 H35 BUL sing 134 n n # _atom_sites.entry_id 1LSP _atom_sites.fract_transf_matrix[1][1] 0.010906 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015307 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026212 _atom_sites.fract_transf_vector[1] -0.25 _atom_sites.fract_transf_vector[2] -0.25 _atom_sites.fract_transf_vector[3] -0.25 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BUL A 1 295 295 BUL BUL . C 3 HOH A 1 186 186 HOH HOH . C 3 HOH A 2 187 187 HOH HOH . C 3 HOH A 3 188 188 HOH HOH . C 3 HOH A 4 189 189 HOH HOH . C 3 HOH A 5 190 190 HOH HOH . C 3 HOH A 6 191 191 HOH HOH . C 3 HOH A 7 192 192 HOH HOH . C 3 HOH A 8 193 193 HOH HOH . C 3 HOH A 9 194 194 HOH HOH . C 3 HOH A 10 195 195 HOH HOH . C 3 HOH A 11 196 196 HOH HOH . C 3 HOH A 12 197 197 HOH HOH . C 3 HOH A 13 198 198 HOH HOH . C 3 HOH A 14 199 199 HOH HOH . C 3 HOH A 15 200 200 HOH HOH . C 3 HOH A 16 201 201 HOH HOH . C 3 HOH A 17 202 202 HOH HOH . C 3 HOH A 18 203 203 HOH HOH . C 3 HOH A 19 204 204 HOH HOH . C 3 HOH A 20 205 205 HOH HOH . C 3 HOH A 21 206 206 HOH HOH . C 3 HOH A 22 207 207 HOH HOH . C 3 HOH A 23 208 208 HOH HOH . C 3 HOH A 24 209 209 HOH HOH . C 3 HOH A 25 210 210 HOH HOH . C 3 HOH A 26 211 211 HOH HOH . C 3 HOH A 27 212 212 HOH HOH . C 3 HOH A 28 213 213 HOH HOH . C 3 HOH A 29 214 214 HOH HOH . C 3 HOH A 30 215 215 HOH HOH . C 3 HOH A 31 216 216 HOH HOH . C 3 HOH A 32 217 217 HOH HOH . C 3 HOH A 33 218 218 HOH HOH . C 3 HOH A 34 219 219 HOH HOH . C 3 HOH A 35 220 220 HOH HOH . C 3 HOH A 36 221 221 HOH HOH . C 3 HOH A 37 222 222 HOH HOH . C 3 HOH A 38 223 223 HOH HOH . C 3 HOH A 39 224 224 HOH HOH . C 3 HOH A 40 225 225 HOH HOH . C 3 HOH A 41 226 226 HOH HOH . C 3 HOH A 42 227 227 HOH HOH . C 3 HOH A 43 228 228 HOH HOH . C 3 HOH A 44 229 229 HOH HOH . C 3 HOH A 45 230 230 HOH HOH . C 3 HOH A 46 231 231 HOH HOH . C 3 HOH A 47 232 232 HOH HOH . C 3 HOH A 48 233 233 HOH HOH . C 3 HOH A 49 234 234 HOH HOH . C 3 HOH A 50 235 235 HOH HOH . C 3 HOH A 51 236 236 HOH HOH . C 3 HOH A 52 237 237 HOH HOH . C 3 HOH A 53 238 238 HOH HOH . C 3 HOH A 54 239 239 HOH HOH . C 3 HOH A 55 240 240 HOH HOH . C 3 HOH A 56 241 241 HOH HOH . C 3 HOH A 57 242 242 HOH HOH . C 3 HOH A 58 243 243 HOH HOH . C 3 HOH A 59 244 244 HOH HOH . C 3 HOH A 60 245 245 HOH HOH . C 3 HOH A 61 246 246 HOH HOH . C 3 HOH A 62 247 247 HOH HOH . C 3 HOH A 63 248 248 HOH HOH . C 3 HOH A 64 249 249 HOH HOH . C 3 HOH A 65 250 250 HOH HOH . C 3 HOH A 66 251 251 HOH HOH . C 3 HOH A 67 252 252 HOH HOH . C 3 HOH A 68 253 253 HOH HOH . C 3 HOH A 69 254 254 HOH HOH . C 3 HOH A 70 255 255 HOH HOH . C 3 HOH A 71 256 256 HOH HOH . C 3 HOH A 72 257 257 HOH HOH . C 3 HOH A 73 258 258 HOH HOH . C 3 HOH A 74 259 259 HOH HOH . C 3 HOH A 75 260 260 HOH HOH . C 3 HOH A 76 261 261 HOH HOH . C 3 HOH A 77 262 262 HOH HOH . C 3 HOH A 78 263 263 HOH HOH . C 3 HOH A 79 264 264 HOH HOH . C 3 HOH A 80 265 265 HOH HOH . C 3 HOH A 81 266 266 HOH HOH . C 3 HOH A 82 267 267 HOH HOH . C 3 HOH A 83 268 268 HOH HOH . C 3 HOH A 84 269 269 HOH HOH . C 3 HOH A 85 270 270 HOH HOH . C 3 HOH A 86 271 271 HOH HOH . C 3 HOH A 87 272 272 HOH HOH . C 3 HOH A 88 273 273 HOH HOH . C 3 HOH A 89 274 274 HOH HOH . C 3 HOH A 90 275 275 HOH HOH . C 3 HOH A 91 276 276 HOH HOH . C 3 HOH A 92 277 277 HOH HOH . C 3 HOH A 93 278 278 HOH HOH . C 3 HOH A 94 279 279 HOH HOH . C 3 HOH A 95 280 280 HOH HOH . C 3 HOH A 96 281 281 HOH HOH . C 3 HOH A 97 282 282 HOH HOH . C 3 HOH A 98 283 283 HOH HOH . C 3 HOH A 99 284 284 HOH HOH . C 3 HOH A 100 285 285 HOH HOH . C 3 HOH A 101 286 286 HOH HOH . C 3 HOH A 102 287 287 HOH HOH . C 3 HOH A 103 288 288 HOH HOH . C 3 HOH A 104 289 289 HOH HOH . C 3 HOH A 105 290 290 HOH HOH . C 3 HOH A 106 291 291 HOH HOH . C 3 HOH A 107 292 292 HOH HOH . C 3 HOH A 108 293 293 HOH HOH . C 3 HOH A 109 294 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 BUL . . . B 2 4.163 -3.127 24.987 1 16.48 ? O1 BUL 295 A 1 HETATM 2 C C2 BUL . . . B 2 5.255 -2.447 24.493 1 5.74 ? C2 BUL 295 A 1 HETATM 3 C C3 BUL . . . B 2 6.505 -2.587 25.274 1 21.77 ? C3 BUL 295 A 1 HETATM 4 C C4 BUL . . . B 2 6.792 -4.006 25.738 1 17.54 ? C4 BUL 295 A 1 HETATM 5 C C5 BUL . . . B 2 5.59 -4.538 26.511 1 14.71 ? C5 BUL 295 A 1 HETATM 6 C C6 BUL . . . B 2 4.325 -4.231 25.768 1 7.26 ? C6 BUL 295 A 1 HETATM 7 N N7 BUL . . . B 2 4.916 1.776 22.712 1 14.53 ? N7 BUL 295 A 1 HETATM 8 C C8 BUL . . . B 2 3.388 1.544 22.664 1 14.5 ? C8 BUL 295 A 1 HETATM 9 C C9 BUL . . . B 2 3.145 0.354 23.589 1 1.79 ? C9 BUL 295 A 1 HETATM 10 C C10 BUL . . . B 2 4.374 -0.493 23.375 1 1.5 ? C10 BUL 295 A 1 HETATM 11 C C11 BUL . . . B 2 5.607 0.474 23.082 1 21.53 ? C11 BUL 295 A 1 HETATM 12 C C12 BUL . . . B 2 3.008 -4.694 26.287 1 9.83 ? C12 BUL 295 A 1 HETATM 13 O O13 BUL . . . B 2 2.112 -4.842 25.148 1 37.56 ? O13 BUL 295 A 1 HETATM 14 O O14 BUL . . . B 2 5.808 -5.977 26.458 1 37.66 ? O14 BUL 295 A 1 HETATM 15 O O15 BUL . . . B 2 7.601 -3.537 26.792 1 32.06 ? O15 BUL 295 A 1 HETATM 16 N N16 BUL . . . B 2 7.563 -1.788 24.687 1 28.46 ? N16 BUL 295 A 1 HETATM 17 C C17 BUL . . . B 2 8.093 -0.668 25.22 1 6.85 ? C17 BUL 295 A 1 HETATM 18 O O18 BUL . . . B 2 7.435 -0.049 26.03 1 16.01 ? O18 BUL 295 A 1 HETATM 19 C C19 BUL . . . B 2 9.205 0.017 24.487 1 4.04 ? C19 BUL 295 A 1 HETATM 20 O O20 BUL . . . B 2 4.791 -1.184 24.525 1 12.99 ? O20 BUL 295 A 1 HETATM 21 C C21 BUL . . . B 2 6.391 -0.053 21.844 1 17.67 ? C21 BUL 295 A 1 HETATM 22 O O22 BUL . . . B 2 5.625 0.384 20.737 1 9.55 ? O22 BUL 295 A 1 HETATM 23 C C23 BUL . . . B 2 2.856 2.925 22.987 1 27.7 ? C23 BUL 295 A 1 HETATM 24 O O24 BUL . . . B 2 3.452 3.715 23.739 1 14.57 ? O24 BUL 295 A 1 HETATM 25 N N25 BUL . . . B 2 1.571 3.11 22.619 1 34.96 ? N25 BUL 295 A 1 HETATM 26 C C26 BUL . . . B 2 0.976 4.485 22.699 1 59.31 ? C26 BUL 295 A 1 HETATM 27 C C27 BUL . . . B 2 0.029 4.577 23.89 1 21.72 ? C27 BUL 295 A 1 HETATM 28 S S28 BUL . . . B 2 -0.41 6.284 24.078 1 19.68 ? S28 BUL 295 A 1 HETATM 29 O O29 BUL . . . B 2 -1.536 6.461 23.178 1 13.2 ? O29 BUL 295 A 1 HETATM 30 O O30 BUL . . . B 2 -0.984 6.356 25.432 1 37.2 ? O30 BUL 295 A 1 HETATM 31 O O31 BUL . . . B 2 0.749 7.176 23.994 1 7.05 ? O31 BUL 295 A 1 HETATM 32 S S32 BUL . . . B 2 5.865 -6.457 27.924 1 15.6 ? S32 BUL 295 A 1 HETATM 33 O O33 BUL . . . B 2 4.705 -5.9 28.625 1 19.92 ? O33 BUL 295 A 1 HETATM 34 O O34 BUL . . . B 2 5.39 -7.84 27.885 1 34.02 ? O34 BUL 295 A 1 HETATM 35 O O35 BUL . . . B 2 7.214 -6.582 28.459 1 24.66 ? O35 BUL 295 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #