data_1LTD # _model_server_result.job_id MAE_qpMuIan0L0DirvtWYw _model_server_result.datetime_utc '2024-10-12 19:26:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ltd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":580}' # _entry.id 1LTD # _exptl.entry_id 1LTD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 80.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFITE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1LTD _cell.length_a 164.5 _cell.length_b 164.5 _cell.length_c 114 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D N5 FMN . A FMN 570 1_555 C S SO3 . A SO3 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? covale ? covale2 G N5 FMN . B FMN 570 1_555 F S SO3 . B SO3 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.813 ? metalc ? metalc1 A NE2 HIS 38 A HIS 43 1_555 E FE HEM . A HEM 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc2 A NE2 HIS 61 A HIS 66 1_555 E FE HEM . A HEM 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? # _chem_comp.formula 'O3 S -2' _chem_comp.formula_weight 80.063 _chem_comp.id SO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFITE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO3 doub 426 n n S O2 SO3 sing 427 n n S O3 SO3 sing 428 n n # _atom_sites.entry_id 1LTD _atom_sites.fract_transf_matrix[1][1] 0.006079 _atom_sites.fract_transf_matrix[1][2] 0.00351 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007019 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008772 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO3 A 1 580 580 SO3 SO3 . D 3 FMN A 1 570 570 FMN FMN . E 4 HEM A 1 560 560 HEM HEM . F 2 SO3 B 1 580 580 SO3 SO3 . G 3 FMN B 1 570 570 FMN FMN . H 5 HOH A 1 601 601 HOH HOH . H 5 HOH A 2 602 602 HOH HOH . H 5 HOH A 3 603 603 HOH HOH . H 5 HOH A 4 604 604 HOH HOH . H 5 HOH A 5 605 605 HOH HOH . H 5 HOH A 6 606 606 HOH HOH . H 5 HOH A 7 607 607 HOH HOH . H 5 HOH A 8 608 608 HOH HOH . H 5 HOH A 9 609 609 HOH HOH . H 5 HOH A 10 610 610 HOH HOH . H 5 HOH A 11 611 611 HOH HOH . H 5 HOH A 12 612 612 HOH HOH . H 5 HOH A 13 613 613 HOH HOH . H 5 HOH A 14 614 614 HOH HOH . H 5 HOH A 15 615 615 HOH HOH . H 5 HOH A 16 616 616 HOH HOH . H 5 HOH A 17 617 617 HOH HOH . H 5 HOH A 18 618 618 HOH HOH . H 5 HOH A 19 619 619 HOH HOH . H 5 HOH A 20 620 620 HOH HOH . H 5 HOH A 21 621 621 HOH HOH . H 5 HOH A 22 622 622 HOH HOH . H 5 HOH A 23 623 623 HOH HOH . H 5 HOH A 24 624 624 HOH HOH . H 5 HOH A 25 625 625 HOH HOH . H 5 HOH A 26 626 626 HOH HOH . H 5 HOH A 27 627 627 HOH HOH . H 5 HOH A 28 628 628 HOH HOH . H 5 HOH A 29 629 629 HOH HOH . H 5 HOH A 30 630 630 HOH HOH . H 5 HOH A 31 631 631 HOH HOH . H 5 HOH A 32 632 632 HOH HOH . H 5 HOH A 33 633 633 HOH HOH . H 5 HOH A 34 634 634 HOH HOH . H 5 HOH A 35 635 635 HOH HOH . H 5 HOH A 36 636 636 HOH HOH . H 5 HOH A 37 637 637 HOH HOH . H 5 HOH A 38 638 638 HOH HOH . H 5 HOH A 39 639 639 HOH HOH . H 5 HOH A 40 640 640 HOH HOH . H 5 HOH A 41 641 641 HOH HOH . H 5 HOH A 42 642 642 HOH HOH . H 5 HOH A 43 643 643 HOH HOH . H 5 HOH A 44 644 644 HOH HOH . H 5 HOH A 45 645 645 HOH HOH . H 5 HOH A 46 646 646 HOH HOH . H 5 HOH A 47 647 647 HOH HOH . H 5 HOH A 48 648 648 HOH HOH . H 5 HOH A 49 649 649 HOH HOH . H 5 HOH A 50 650 650 HOH HOH . H 5 HOH A 51 651 651 HOH HOH . H 5 HOH A 52 652 652 HOH HOH . H 5 HOH A 53 653 653 HOH HOH . H 5 HOH A 54 654 654 HOH HOH . H 5 HOH A 55 655 655 HOH HOH . H 5 HOH A 56 656 656 HOH HOH . H 5 HOH A 57 657 657 HOH HOH . H 5 HOH A 58 658 658 HOH HOH . H 5 HOH A 59 659 659 HOH HOH . H 5 HOH A 60 660 660 HOH HOH . H 5 HOH A 61 661 661 HOH HOH . H 5 HOH A 62 662 662 HOH HOH . H 5 HOH A 63 663 663 HOH HOH . H 5 HOH A 64 665 665 HOH HOH . H 5 HOH A 65 666 666 HOH HOH . H 5 HOH A 66 667 667 HOH HOH . H 5 HOH A 67 668 668 HOH HOH . H 5 HOH A 68 669 669 HOH HOH . H 5 HOH A 69 670 670 HOH HOH . H 5 HOH A 70 671 671 HOH HOH . H 5 HOH A 71 672 672 HOH HOH . H 5 HOH A 72 673 673 HOH HOH . H 5 HOH A 73 674 674 HOH HOH . H 5 HOH A 74 675 675 HOH HOH . H 5 HOH A 75 676 676 HOH HOH . H 5 HOH A 76 677 677 HOH HOH . H 5 HOH A 77 678 678 HOH HOH . H 5 HOH A 78 679 679 HOH HOH . H 5 HOH A 79 680 680 HOH HOH . H 5 HOH A 80 681 681 HOH HOH . H 5 HOH A 81 682 682 HOH HOH . H 5 HOH A 82 683 683 HOH HOH . H 5 HOH A 83 684 684 HOH HOH . H 5 HOH A 84 685 685 HOH HOH . H 5 HOH A 85 686 686 HOH HOH . H 5 HOH A 86 687 687 HOH HOH . H 5 HOH A 87 688 688 HOH HOH . H 5 HOH A 88 689 689 HOH HOH . H 5 HOH A 89 690 690 HOH HOH . H 5 HOH A 90 691 691 HOH HOH . H 5 HOH A 91 692 692 HOH HOH . H 5 HOH A 92 693 693 HOH HOH . H 5 HOH A 93 694 694 HOH HOH . H 5 HOH A 94 695 695 HOH HOH . H 5 HOH A 95 696 696 HOH HOH . H 5 HOH A 96 697 697 HOH HOH . H 5 HOH A 97 698 698 HOH HOH . H 5 HOH A 98 699 699 HOH HOH . H 5 HOH A 99 700 700 HOH HOH . H 5 HOH A 100 701 701 HOH HOH . H 5 HOH A 101 702 702 HOH HOH . H 5 HOH A 102 703 703 HOH HOH . H 5 HOH A 103 704 704 HOH HOH . H 5 HOH A 104 705 705 HOH HOH . H 5 HOH A 105 706 706 HOH HOH . H 5 HOH A 106 707 707 HOH HOH . H 5 HOH A 107 708 708 HOH HOH . H 5 HOH A 108 709 709 HOH HOH . H 5 HOH A 109 710 710 HOH HOH . H 5 HOH A 110 711 711 HOH HOH . H 5 HOH A 111 712 712 HOH HOH . H 5 HOH A 112 713 713 HOH HOH . H 5 HOH A 113 714 714 HOH HOH . H 5 HOH A 114 715 715 HOH HOH . H 5 HOH A 115 716 716 HOH HOH . H 5 HOH A 116 717 717 HOH HOH . H 5 HOH A 117 718 718 HOH HOH . H 5 HOH A 118 719 719 HOH HOH . H 5 HOH A 119 720 720 HOH HOH . H 5 HOH A 120 721 721 HOH HOH . H 5 HOH A 121 723 723 HOH HOH . H 5 HOH A 122 724 724 HOH HOH . H 5 HOH A 123 725 725 HOH HOH . H 5 HOH A 124 726 726 HOH HOH . H 5 HOH A 125 727 727 HOH HOH . H 5 HOH A 126 728 728 HOH HOH . H 5 HOH A 127 729 729 HOH HOH . H 5 HOH A 128 730 730 HOH HOH . H 5 HOH A 129 732 732 HOH HOH . H 5 HOH A 130 733 733 HOH HOH . H 5 HOH A 131 734 734 HOH HOH . H 5 HOH A 132 735 735 HOH HOH . H 5 HOH A 133 736 736 HOH HOH . H 5 HOH A 134 737 737 HOH HOH . H 5 HOH A 135 738 738 HOH HOH . H 5 HOH A 136 739 739 HOH HOH . H 5 HOH A 137 740 740 HOH HOH . H 5 HOH A 138 741 741 HOH HOH . H 5 HOH A 139 769 769 HOH HOH . H 5 HOH A 140 795 795 HOH HOH . H 5 HOH A 141 796 796 HOH HOH . H 5 HOH A 142 797 797 HOH HOH . H 5 HOH A 143 798 798 HOH HOH . H 5 HOH A 144 800 800 HOH HOH . H 5 HOH A 145 801 801 HOH HOH . I 5 HOH B 1 664 664 HOH HOH . I 5 HOH B 2 722 722 HOH HOH . I 5 HOH B 3 731 731 HOH HOH . I 5 HOH B 4 742 742 HOH HOH . I 5 HOH B 5 743 743 HOH HOH . I 5 HOH B 6 744 744 HOH HOH . I 5 HOH B 7 745 745 HOH HOH . I 5 HOH B 8 746 746 HOH HOH . I 5 HOH B 9 747 747 HOH HOH . I 5 HOH B 10 748 748 HOH HOH . I 5 HOH B 11 749 749 HOH HOH . I 5 HOH B 12 750 750 HOH HOH . I 5 HOH B 13 751 751 HOH HOH . I 5 HOH B 14 752 752 HOH HOH . I 5 HOH B 15 753 753 HOH HOH . I 5 HOH B 16 754 754 HOH HOH . I 5 HOH B 17 755 755 HOH HOH . I 5 HOH B 18 756 756 HOH HOH . I 5 HOH B 19 757 757 HOH HOH . I 5 HOH B 20 758 758 HOH HOH . I 5 HOH B 21 759 759 HOH HOH . I 5 HOH B 22 760 760 HOH HOH . I 5 HOH B 23 761 761 HOH HOH . I 5 HOH B 24 762 762 HOH HOH . I 5 HOH B 25 763 763 HOH HOH . I 5 HOH B 26 764 764 HOH HOH . I 5 HOH B 27 765 765 HOH HOH . I 5 HOH B 28 766 766 HOH HOH . I 5 HOH B 29 767 767 HOH HOH . I 5 HOH B 30 768 768 HOH HOH . I 5 HOH B 31 770 770 HOH HOH . I 5 HOH B 32 771 771 HOH HOH . I 5 HOH B 33 772 772 HOH HOH . I 5 HOH B 34 773 773 HOH HOH . I 5 HOH B 35 774 774 HOH HOH . I 5 HOH B 36 775 775 HOH HOH . I 5 HOH B 37 776 776 HOH HOH . I 5 HOH B 38 777 777 HOH HOH . I 5 HOH B 39 778 778 HOH HOH . I 5 HOH B 40 779 779 HOH HOH . I 5 HOH B 41 780 780 HOH HOH . I 5 HOH B 42 781 781 HOH HOH . I 5 HOH B 43 782 782 HOH HOH . I 5 HOH B 44 783 783 HOH HOH . I 5 HOH B 45 784 784 HOH HOH . I 5 HOH B 46 785 785 HOH HOH . I 5 HOH B 47 786 786 HOH HOH . I 5 HOH B 48 787 787 HOH HOH . I 5 HOH B 49 788 788 HOH HOH . I 5 HOH B 50 789 789 HOH HOH . I 5 HOH B 51 790 790 HOH HOH . I 5 HOH B 52 791 791 HOH HOH . I 5 HOH B 53 792 792 HOH HOH . I 5 HOH B 54 793 793 HOH HOH . I 5 HOH B 55 794 794 HOH HOH . I 5 HOH B 56 799 799 HOH HOH . I 5 HOH B 57 802 802 HOH HOH . I 5 HOH B 58 803 803 HOH HOH . I 5 HOH B 59 804 804 HOH HOH . I 5 HOH B 60 805 805 HOH HOH . I 5 HOH B 61 806 806 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO3 . . . C 2 67.572 54.342 4.324 1 28.76 ? S SO3 580 A 1 HETATM 2 O O1 SO3 . . . C 2 67.4 52.933 4.706 1 26.03 ? O1 SO3 580 A 1 HETATM 3 O O2 SO3 . . . C 2 66.429 55.217 4.783 1 27.44 ? O2 SO3 580 A 1 HETATM 4 O O3 SO3 . . . C 2 68.748 54.855 5.09 1 29.19 ? O3 SO3 580 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #