data_1LTI # _model_server_result.job_id EoQcIOwByPN8mBNbhM8BuQ _model_server_result.datetime_utc '2024-11-27 11:31:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":104}' # _entry.id 1LTI # _exptl.entry_id 1LTI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 5 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-galactopyranose _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LTI _cell.length_a 119.7 _cell.length_b 100.5 _cell.length_c 64.4 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LTI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.comp_id_2 A2G _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O3 _pdbx_entity_branch_link.leaving_atom_id_2 HO3 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n H A2G 1 B 1 A2G G 105 NGA 4 n H GAL 2 B 2 GAL G 104 GAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 D CYS 9 1_555 A SG CYS 86 D CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf2 B SG CYS 9 E CYS 9 1_555 B SG CYS 86 E CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf3 C SG CYS 9 F CYS 9 1_555 C SG CYS 86 F CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 D SG CYS 9 G CYS 9 1_555 D SG CYS 86 G CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 E SG CYS 9 H CYS 9 1_555 E SG CYS 86 H CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 F SG CYS 187 A CYS 187 1_555 G SG CYS 7 C CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 H O3 A2G . B A2G 1 1_555 H C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GAL _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-galactopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-galactose;D-galactose;galactose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GAL sing 113 n n C1 O1 GAL sing 114 n n C1 O5 GAL sing 115 n n C1 H1 GAL sing 116 n n C2 C3 GAL sing 117 n n C2 O2 GAL sing 118 n n C2 H2 GAL sing 119 n n C3 C4 GAL sing 120 n n C3 O3 GAL sing 121 n n C3 H3 GAL sing 122 n n C4 C5 GAL sing 123 n n C4 O4 GAL sing 124 n n C4 H4 GAL sing 125 n n C5 C6 GAL sing 126 n n C5 O5 GAL sing 127 n n C5 H5 GAL sing 128 n n C6 O6 GAL sing 129 n n C6 H61 GAL sing 130 n n C6 H62 GAL sing 131 n n O1 HO1 GAL sing 132 n n O2 HO2 GAL sing 133 n n O3 HO3 GAL sing 134 n n O4 HO4 GAL sing 135 n n O6 HO6 GAL sing 136 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GAL DGalpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GAL b-D-galactopyranose 'COMMON NAME' GMML 1 GAL b-D-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GAL Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1LTI _atom_sites.fract_transf_matrix[1][1] 0.008354 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00995 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 GAL D 1 104 104 GAL GAL . J 5 GAL E 1 104 104 GAL GAL . K 5 GAL H 1 104 104 GAL GAL . L 6 HOH D 1 105 1 HOH HOH . L 6 HOH D 2 106 3 HOH HOH . L 6 HOH D 3 107 16 HOH HOH . L 6 HOH D 4 108 20 HOH HOH . L 6 HOH D 5 109 21 HOH HOH . L 6 HOH D 6 110 22 HOH HOH . L 6 HOH D 7 111 28 HOH HOH . L 6 HOH D 8 112 30 HOH HOH . L 6 HOH D 9 113 35 HOH HOH . L 6 HOH D 10 114 43 HOH HOH . L 6 HOH D 11 115 45 HOH HOH . L 6 HOH D 12 116 50 HOH HOH . L 6 HOH D 13 117 51 HOH HOH . L 6 HOH D 14 118 52 HOH HOH . L 6 HOH D 15 119 55 HOH HOH . L 6 HOH D 16 120 60 HOH HOH . L 6 HOH D 17 121 69 HOH HOH . L 6 HOH D 18 122 70 HOH HOH . L 6 HOH D 19 123 79 HOH HOH . L 6 HOH D 20 124 80 HOH HOH . L 6 HOH D 21 125 92 HOH HOH . L 6 HOH D 22 126 96 HOH HOH . L 6 HOH D 23 127 123 HOH HOH . L 6 HOH D 24 128 124 HOH HOH . L 6 HOH D 25 129 125 HOH HOH . L 6 HOH D 26 130 126 HOH HOH . L 6 HOH D 27 131 132 HOH HOH . L 6 HOH D 28 132 141 HOH HOH . L 6 HOH D 29 133 156 HOH HOH . L 6 HOH D 30 134 177 HOH HOH . L 6 HOH D 31 135 180 HOH HOH . M 6 HOH E 1 105 2 HOH HOH . M 6 HOH E 2 106 6 HOH HOH . M 6 HOH E 3 107 8 HOH HOH . M 6 HOH E 4 108 12 HOH HOH . M 6 HOH E 5 109 24 HOH HOH . M 6 HOH E 6 110 34 HOH HOH . M 6 HOH E 7 111 39 HOH HOH . M 6 HOH E 8 112 42 HOH HOH . M 6 HOH E 9 113 54 HOH HOH . M 6 HOH E 10 114 59 HOH HOH . M 6 HOH E 11 115 67 HOH HOH . M 6 HOH E 12 116 71 HOH HOH . M 6 HOH E 13 117 73 HOH HOH . M 6 HOH E 14 118 76 HOH HOH . M 6 HOH E 15 119 81 HOH HOH . M 6 HOH E 16 120 89 HOH HOH . M 6 HOH E 17 121 99 HOH HOH . M 6 HOH E 18 122 100 HOH HOH . M 6 HOH E 19 123 101 HOH HOH . M 6 HOH E 20 124 110 HOH HOH . M 6 HOH E 21 125 120 HOH HOH . M 6 HOH E 22 126 129 HOH HOH . M 6 HOH E 23 127 136 HOH HOH . M 6 HOH E 24 128 138 HOH HOH . M 6 HOH E 25 129 145 HOH HOH . M 6 HOH E 26 130 152 HOH HOH . M 6 HOH E 27 131 158 HOH HOH . M 6 HOH E 28 132 163 HOH HOH . M 6 HOH E 29 133 167 HOH HOH . M 6 HOH E 30 134 168 HOH HOH . N 6 HOH F 1 104 4 HOH HOH . N 6 HOH F 2 105 11 HOH HOH . N 6 HOH F 3 106 13 HOH HOH . N 6 HOH F 4 107 17 HOH HOH . N 6 HOH F 5 108 19 HOH HOH . N 6 HOH F 6 109 23 HOH HOH . N 6 HOH F 7 110 26 HOH HOH . N 6 HOH F 8 111 27 HOH HOH . N 6 HOH F 9 112 40 HOH HOH . N 6 HOH F 10 113 49 HOH HOH . N 6 HOH F 11 114 66 HOH HOH . N 6 HOH F 12 115 75 HOH HOH . N 6 HOH F 13 116 82 HOH HOH . N 6 HOH F 14 117 83 HOH HOH . N 6 HOH F 15 118 87 HOH HOH . N 6 HOH F 16 119 93 HOH HOH . N 6 HOH F 17 120 95 HOH HOH . N 6 HOH F 18 121 102 HOH HOH . N 6 HOH F 19 122 103 HOH HOH . N 6 HOH F 20 123 107 HOH HOH . N 6 HOH F 21 124 116 HOH HOH . N 6 HOH F 22 125 127 HOH HOH . N 6 HOH F 23 126 131 HOH HOH . N 6 HOH F 24 127 161 HOH HOH . N 6 HOH F 25 128 162 HOH HOH . N 6 HOH F 26 129 173 HOH HOH . N 6 HOH F 27 130 178 HOH HOH . O 6 HOH G 1 106 7 HOH HOH . O 6 HOH G 2 107 9 HOH HOH . O 6 HOH G 3 108 14 HOH HOH . O 6 HOH G 4 109 31 HOH HOH . O 6 HOH G 5 110 32 HOH HOH . O 6 HOH G 6 111 38 HOH HOH . O 6 HOH G 7 112 41 HOH HOH . O 6 HOH G 8 113 48 HOH HOH . O 6 HOH G 9 114 56 HOH HOH . O 6 HOH G 10 115 57 HOH HOH . O 6 HOH G 11 116 65 HOH HOH . O 6 HOH G 12 117 74 HOH HOH . O 6 HOH G 13 118 84 HOH HOH . O 6 HOH G 14 119 86 HOH HOH . O 6 HOH G 15 120 94 HOH HOH . O 6 HOH G 16 121 105 HOH HOH . O 6 HOH G 17 122 113 HOH HOH . O 6 HOH G 18 123 114 HOH HOH . O 6 HOH G 19 124 115 HOH HOH . O 6 HOH G 20 125 117 HOH HOH . O 6 HOH G 21 126 118 HOH HOH . O 6 HOH G 22 127 128 HOH HOH . O 6 HOH G 23 128 134 HOH HOH . O 6 HOH G 24 129 139 HOH HOH . O 6 HOH G 25 130 144 HOH HOH . O 6 HOH G 26 131 149 HOH HOH . O 6 HOH G 27 132 151 HOH HOH . O 6 HOH G 28 133 154 HOH HOH . O 6 HOH G 29 134 160 HOH HOH . O 6 HOH G 30 135 165 HOH HOH . O 6 HOH G 31 136 175 HOH HOH . O 6 HOH G 32 137 176 HOH HOH . O 6 HOH G 33 138 181 HOH HOH . O 6 HOH G 34 139 182 HOH HOH . P 6 HOH H 1 105 5 HOH HOH . P 6 HOH H 2 106 10 HOH HOH . P 6 HOH H 3 107 25 HOH HOH . P 6 HOH H 4 108 29 HOH HOH . P 6 HOH H 5 109 33 HOH HOH . P 6 HOH H 6 110 44 HOH HOH . P 6 HOH H 7 111 47 HOH HOH . P 6 HOH H 8 112 58 HOH HOH . P 6 HOH H 9 113 61 HOH HOH . P 6 HOH H 10 114 64 HOH HOH . P 6 HOH H 11 115 68 HOH HOH . P 6 HOH H 12 116 72 HOH HOH . P 6 HOH H 13 117 77 HOH HOH . P 6 HOH H 14 118 85 HOH HOH . P 6 HOH H 15 119 88 HOH HOH . P 6 HOH H 16 120 90 HOH HOH . P 6 HOH H 17 121 97 HOH HOH . P 6 HOH H 18 122 98 HOH HOH . P 6 HOH H 19 123 106 HOH HOH . P 6 HOH H 20 124 111 HOH HOH . P 6 HOH H 21 125 121 HOH HOH . P 6 HOH H 22 126 130 HOH HOH . P 6 HOH H 23 127 137 HOH HOH . P 6 HOH H 24 128 140 HOH HOH . P 6 HOH H 25 129 146 HOH HOH . P 6 HOH H 26 130 147 HOH HOH . P 6 HOH H 27 131 150 HOH HOH . P 6 HOH H 28 132 153 HOH HOH . P 6 HOH H 29 133 155 HOH HOH . P 6 HOH H 30 134 157 HOH HOH . P 6 HOH H 31 135 159 HOH HOH . P 6 HOH H 32 136 166 HOH HOH . P 6 HOH H 33 137 172 HOH HOH . Q 6 HOH A 1 193 15 HOH HOH . Q 6 HOH A 2 194 37 HOH HOH . Q 6 HOH A 3 195 53 HOH HOH . Q 6 HOH A 4 196 62 HOH HOH . Q 6 HOH A 5 197 63 HOH HOH . Q 6 HOH A 6 198 91 HOH HOH . Q 6 HOH A 7 199 104 HOH HOH . Q 6 HOH A 8 200 119 HOH HOH . Q 6 HOH A 9 201 133 HOH HOH . Q 6 HOH A 10 202 135 HOH HOH . Q 6 HOH A 11 203 143 HOH HOH . Q 6 HOH A 12 204 169 HOH HOH . Q 6 HOH A 13 205 170 HOH HOH . Q 6 HOH A 14 206 171 HOH HOH . Q 6 HOH A 15 207 174 HOH HOH . R 6 HOH C 1 18 18 HOH HOH . R 6 HOH C 2 36 36 HOH HOH . R 6 HOH C 3 46 46 HOH HOH . R 6 HOH C 4 78 78 HOH HOH . R 6 HOH C 5 108 108 HOH HOH . R 6 HOH C 6 109 109 HOH HOH . R 6 HOH C 7 112 112 HOH HOH . R 6 HOH C 8 122 122 HOH HOH . R 6 HOH C 9 142 142 HOH HOH . R 6 HOH C 10 148 148 HOH HOH . R 6 HOH C 11 164 164 HOH HOH . R 6 HOH C 12 179 179 HOH HOH . R 6 HOH C 13 183 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GAL . . . K 5 15.589 25.567 14.421 1 66.95 ? C1 GAL 104 H 1 HETATM 2 C C2 GAL . . . K 5 14.696 24.406 15.088 1 67.7 ? C2 GAL 104 H 1 HETATM 3 C C3 GAL . . . K 5 13.353 24.936 15.6 1 63.84 ? C3 GAL 104 H 1 HETATM 4 C C4 GAL . . . K 5 13.613 26.12 16.55 1 62.89 ? C4 GAL 104 H 1 HETATM 5 C C5 GAL . . . K 5 14.434 27.243 15.847 1 62.26 ? C5 GAL 104 H 1 HETATM 6 C C6 GAL . . . K 5 14.755 28.41 16.778 1 60.87 ? C6 GAL 104 H 1 HETATM 7 O O2 GAL . . . K 5 14.356 23.264 14.303 1 66.22 ? O2 GAL 104 H 1 HETATM 8 O O3 GAL . . . K 5 12.77 23.848 16.256 1 60.04 ? O3 GAL 104 H 1 HETATM 9 O O4 GAL . . . K 5 14.341 25.6 17.641 1 63.75 ? O4 GAL 104 H 1 HETATM 10 O O5 GAL . . . K 5 15.702 26.681 15.358 1 63.22 ? O5 GAL 104 H 1 HETATM 11 O O6 GAL . . . K 5 15.724 29.304 16.225 1 62.28 ? O6 GAL 104 H 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 1010 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 11 #