data_1LWG # _model_server_result.job_id tWhYkMhn0dYcczAmpEL4iw _model_server_result.datetime_utc '2024-10-13 06:25:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lwg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":903}' # _entry.id 1LWG # _exptl.entry_id 1LWG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1LWG _cell.length_a 60.425 _cell.length_b 60.425 _cell.length_c 90.388 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LWG _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,B,C,D,E,F,G,H,I,J 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 30.129333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 11 A GLU 11 1_555 E K K . A K 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc2 A O GLY 12 A GLY 12 1_555 E K K . A K 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.261 ? metalc ? metalc3 A OH TYR 18 A TYR 18 1_555 E K K . A K 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc4 A O GLY 28 A GLY 28 1_555 E K K . A K 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc5 A N GLY 30 A GLY 30 1_555 E K K . A K 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 1LWG _atom_sites.fract_transf_matrix[1][1] 0.016549 _atom_sites.fract_transf_matrix[1][2] 0.009555 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011063 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 170 170 PO4 PO4 . C 3 CL A 1 227 227 CL CL . D 3 CL A 1 228 228 CL CL . E 4 K A 1 325 325 K K . F 3 CL A 1 330 330 CL CL . G 5 HED A 1 901 901 HED HED . H 5 HED A 1 902 902 HED HED . I 5 HED A 1 903 903 HED HED . J 6 HOH A 1 167 167 HOH HOH . J 6 HOH A 2 168 168 HOH HOH . J 6 HOH A 3 169 169 HOH HOH . J 6 HOH A 4 171 171 HOH HOH . J 6 HOH A 5 172 172 HOH HOH . J 6 HOH A 6 173 173 HOH HOH . J 6 HOH A 7 174 174 HOH HOH . J 6 HOH A 8 175 175 HOH HOH . J 6 HOH A 9 176 176 HOH HOH . J 6 HOH A 10 177 177 HOH HOH . J 6 HOH A 11 179 179 HOH HOH . J 6 HOH A 12 181 181 HOH HOH . J 6 HOH A 13 182 182 HOH HOH . J 6 HOH A 14 185 185 HOH HOH . J 6 HOH A 15 186 186 HOH HOH . J 6 HOH A 16 187 187 HOH HOH . J 6 HOH A 17 190 190 HOH HOH . J 6 HOH A 18 191 191 HOH HOH . J 6 HOH A 19 192 192 HOH HOH . J 6 HOH A 20 203 203 HOH HOH . J 6 HOH A 21 204 204 HOH HOH . J 6 HOH A 22 207 207 HOH HOH . J 6 HOH A 23 208 208 HOH HOH . J 6 HOH A 24 216 216 HOH HOH . J 6 HOH A 25 217 217 HOH HOH . J 6 HOH A 26 218 218 HOH HOH . J 6 HOH A 27 221 221 HOH HOH . J 6 HOH A 28 222 222 HOH HOH . J 6 HOH A 29 225 225 HOH HOH . J 6 HOH A 30 233 233 HOH HOH . J 6 HOH A 31 234 234 HOH HOH . J 6 HOH A 32 235 235 HOH HOH . J 6 HOH A 33 236 236 HOH HOH . J 6 HOH A 34 237 237 HOH HOH . J 6 HOH A 35 238 238 HOH HOH . J 6 HOH A 36 240 240 HOH HOH . J 6 HOH A 37 243 243 HOH HOH . J 6 HOH A 38 245 245 HOH HOH . J 6 HOH A 39 246 246 HOH HOH . J 6 HOH A 40 249 249 HOH HOH . J 6 HOH A 41 250 250 HOH HOH . J 6 HOH A 42 251 251 HOH HOH . J 6 HOH A 43 252 252 HOH HOH . J 6 HOH A 44 254 254 HOH HOH . J 6 HOH A 45 256 256 HOH HOH . J 6 HOH A 46 257 257 HOH HOH . J 6 HOH A 47 259 259 HOH HOH . J 6 HOH A 48 263 263 HOH HOH . J 6 HOH A 49 264 264 HOH HOH . J 6 HOH A 50 270 270 HOH HOH . J 6 HOH A 51 273 273 HOH HOH . J 6 HOH A 52 276 276 HOH HOH . J 6 HOH A 53 277 277 HOH HOH . J 6 HOH A 54 278 278 HOH HOH . J 6 HOH A 55 281 281 HOH HOH . J 6 HOH A 56 282 282 HOH HOH . J 6 HOH A 57 285 285 HOH HOH . J 6 HOH A 58 286 286 HOH HOH . J 6 HOH A 59 287 287 HOH HOH . J 6 HOH A 60 288 288 HOH HOH . J 6 HOH A 61 289 289 HOH HOH . J 6 HOH A 62 291 291 HOH HOH . J 6 HOH A 63 292 292 HOH HOH . J 6 HOH A 64 296 296 HOH HOH . J 6 HOH A 65 300 300 HOH HOH . J 6 HOH A 66 301 301 HOH HOH . J 6 HOH A 67 302 302 HOH HOH . J 6 HOH A 68 305 305 HOH HOH . J 6 HOH A 69 306 306 HOH HOH . J 6 HOH A 70 324 324 HOH HOH . J 6 HOH A 71 326 326 HOH HOH . J 6 HOH A 72 328 328 HOH HOH . J 6 HOH A 73 329 329 HOH HOH . J 6 HOH A 74 331 331 HOH HOH . J 6 HOH A 75 334 334 HOH HOH . J 6 HOH A 76 337 337 HOH HOH . J 6 HOH A 77 339 339 HOH HOH . J 6 HOH A 78 340 340 HOH HOH . J 6 HOH A 79 341 341 HOH HOH . J 6 HOH A 80 343 343 HOH HOH . J 6 HOH A 81 346 346 HOH HOH . J 6 HOH A 82 348 348 HOH HOH . J 6 HOH A 83 353 353 HOH HOH . J 6 HOH A 84 356 356 HOH HOH . J 6 HOH A 85 358 358 HOH HOH . J 6 HOH A 86 367 367 HOH HOH . J 6 HOH A 87 369 369 HOH HOH . J 6 HOH A 88 381 381 HOH HOH . J 6 HOH A 89 385 385 HOH HOH . J 6 HOH A 90 386 386 HOH HOH . J 6 HOH A 91 389 389 HOH HOH . J 6 HOH A 92 390 390 HOH HOH . J 6 HOH A 93 401 401 HOH HOH . J 6 HOH A 94 404 404 HOH HOH . J 6 HOH A 95 411 411 HOH HOH . J 6 HOH A 96 412 412 HOH HOH . J 6 HOH A 97 413 413 HOH HOH . J 6 HOH A 98 418 418 HOH HOH . J 6 HOH A 99 431 431 HOH HOH . J 6 HOH A 100 436 436 HOH HOH . J 6 HOH A 101 445 445 HOH HOH . J 6 HOH A 102 474 474 HOH HOH . J 6 HOH A 103 478 478 HOH HOH . J 6 HOH A 104 489 489 HOH HOH . J 6 HOH A 105 490 490 HOH HOH . J 6 HOH A 106 492 492 HOH HOH . J 6 HOH A 107 493 493 HOH HOH . J 6 HOH A 108 494 494 HOH HOH . J 6 HOH A 109 495 495 HOH HOH . J 6 HOH A 110 496 496 HOH HOH . J 6 HOH A 111 498 498 HOH HOH . J 6 HOH A 112 501 501 HOH HOH . J 6 HOH A 113 502 502 HOH HOH . J 6 HOH A 114 507 507 HOH HOH . J 6 HOH A 115 508 508 HOH HOH . J 6 HOH A 116 513 513 HOH HOH . J 6 HOH A 117 516 516 HOH HOH . J 6 HOH A 118 520 520 HOH HOH . J 6 HOH A 119 522 522 HOH HOH . J 6 HOH A 120 523 523 HOH HOH . J 6 HOH A 121 534 534 HOH HOH . J 6 HOH A 122 535 535 HOH HOH . J 6 HOH A 123 538 538 HOH HOH . J 6 HOH A 124 545 545 HOH HOH . J 6 HOH A 125 547 547 HOH HOH . J 6 HOH A 126 550 550 HOH HOH . J 6 HOH A 127 552 552 HOH HOH . J 6 HOH A 128 553 553 HOH HOH . J 6 HOH A 129 559 559 HOH HOH . J 6 HOH A 130 563 563 HOH HOH . J 6 HOH A 131 585 585 HOH HOH . J 6 HOH A 132 587 587 HOH HOH . J 6 HOH A 133 589 589 HOH HOH . J 6 HOH A 134 592 592 HOH HOH . J 6 HOH A 135 593 593 HOH HOH . J 6 HOH A 136 594 594 HOH HOH . J 6 HOH A 137 597 597 HOH HOH . J 6 HOH A 138 599 599 HOH HOH . J 6 HOH A 139 600 600 HOH HOH . J 6 HOH A 140 604 604 HOH HOH . J 6 HOH A 141 622 622 HOH HOH . J 6 HOH A 142 628 628 HOH HOH . J 6 HOH A 143 630 630 HOH HOH . J 6 HOH A 144 633 633 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . I 5 23.017 -3.408 -11.706 0.5 15.53 ? C1 HED 903 A 1 HETATM 2 O O1 HED . . . I 5 23.002 -2.013 -11.928 0.5 68.96 ? O1 HED 903 A 1 HETATM 3 C C2 HED . . . I 5 21.653 -3.853 -11.206 0.5 21.02 ? C2 HED 903 A 1 HETATM 4 S S3 HED . . . I 5 21.224 -3.053 -9.637 0.5 26.65 ? S3 HED 903 A 1 HETATM 5 S S4 HED . . . I 5 21.932 -4.168 -8.091 0.5 25.62 ? S4 HED 903 A 1 HETATM 6 C C5 HED . . . I 5 20.874 -5.634 -7.989 0.5 16.55 ? C5 HED 903 A 1 HETATM 7 C C6 HED . . . I 5 19.444 -5.265 -7.553 0.5 16.43 ? C6 HED 903 A 1 HETATM 8 O O6 HED . . . I 5 19.563 -4.554 -6.343 0.5 24.05 ? O6 HED 903 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #