data_1LWJ # _model_server_result.job_id 6ub9wEh6vxlDjNTRakUwVg _model_server_result.datetime_utc '2024-10-11 02:27:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1lwj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":883}' # _entry.id 1LWJ # _exptl.entry_id 1LWJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1LWJ _cell.length_a 94.542 _cell.length_b 181.354 _cell.length_c 197.317 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LWJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 13 A ASP 13 1_555 D CA CA . A CA 883 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc2 A OD1 ASN 15 A ASN 15 1_555 D CA CA . A CA 883 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 A OD2 ASP 17 A ASP 17 1_555 D CA CA . A CA 883 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.062 ? metalc ? metalc4 A OD1 ASP 17 A ASP 17 1_555 D CA CA . A CA 883 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc5 A O VAL 19 A VAL 19 1_555 D CA CA . A CA 883 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc6 A OD2 ASP 21 A ASP 21 1_555 D CA CA . A CA 883 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc7 F CA CA . B CA 10 1_555 B OD1 ASP 13 B ASP 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? metalc ? metalc8 F CA CA . B CA 10 1_555 B OD1 ASN 15 B ASN 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc9 F CA CA . B CA 10 1_555 B ND2 ASN 15 B ASN 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.095 ? metalc ? metalc10 F CA CA . B CA 10 1_555 B OD1 ASP 17 B ASP 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc11 F CA CA . B CA 10 1_555 B OD2 ASP 17 B ASP 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc12 F CA CA . B CA 10 1_555 B O VAL 19 B VAL 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc13 F CA CA . B CA 10 1_555 B OD2 ASP 21 B ASP 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1LWJ _atom_sites.fract_transf_matrix[1][1] 0.010577 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACG A 1 989 989 ACG ACR . D 3 CA A 1 883 4 CA CA . E 2 ACG B 1 988 988 ACG ACR . F 3 CA B 1 10 10 CA CA . G 4 HOH A 1 990 1 HOH WAT . G 4 HOH A 2 991 2 HOH WAT . G 4 HOH A 3 992 3 HOH WAT . G 4 HOH A 4 993 5 HOH WAT . G 4 HOH A 5 994 6 HOH WAT . G 4 HOH A 6 995 7 HOH WAT . G 4 HOH A 7 996 8 HOH WAT . G 4 HOH A 8 997 9 HOH WAT . G 4 HOH A 9 998 14 HOH WAT . G 4 HOH A 10 999 20 HOH WAT . G 4 HOH A 11 1000 21 HOH WAT . G 4 HOH A 12 1001 41 HOH WAT . G 4 HOH A 13 1002 50 HOH WAT . G 4 HOH A 14 1003 51 HOH WAT . G 4 HOH A 15 1004 52 HOH WAT . G 4 HOH A 16 1005 53 HOH WAT . G 4 HOH A 17 1006 54 HOH WAT . H 4 HOH B 1 11 11 HOH WAT . H 4 HOH B 2 12 12 HOH WAT . H 4 HOH B 3 13 13 HOH WAT . H 4 HOH B 4 23 23 HOH WAT . H 4 HOH B 5 24 24 HOH WAT . H 4 HOH B 6 25 25 HOH WAT . H 4 HOH B 7 30 30 HOH WAT . H 4 HOH B 8 31 31 HOH WAT . H 4 HOH B 9 34 34 HOH WAT . H 4 HOH B 10 35 35 HOH WAT . H 4 HOH B 11 36 36 HOH WAT . H 4 HOH B 12 37 37 HOH WAT . H 4 HOH B 13 38 38 HOH WAT . H 4 HOH B 14 39 39 HOH WAT . H 4 HOH B 15 40 40 HOH WAT . H 4 HOH B 16 55 55 HOH WAT . H 4 HOH B 17 56 56 HOH WAT . H 4 HOH B 18 57 57 HOH WAT . H 4 HOH B 19 58 58 HOH WAT . H 4 HOH B 20 59 59 HOH WAT . H 4 HOH B 21 60 60 HOH WAT . H 4 HOH B 22 61 61 HOH WAT . H 4 HOH B 23 62 62 HOH WAT . H 4 HOH B 24 900 900 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.159 _atom_site.Cartn_y 35.858 _atom_site.Cartn_z 7.953 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 75.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 883 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #