data_1LWK
#
_model_server_result.job_id            E0ixokBhRe1jgtckrQbyrw 
_model_server_result.datetime_utc      '2024-11-17 05:23:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lwk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":901}' 
#
_entry.id    1LWK 
#
_exptl.entry_id    1LWK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-HYDROXYETHYL DISULFIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1LWK 
_cell.length_a            60.332 
_cell.length_b            60.332 
_cell.length_c            91.367 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LWK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 1 A MSE 1 1_555 A N ASN 2 A ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C GLU 5 A GLU 5 1_555 A N MSE 6 A MSE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale3 A C MSE 6 A MSE 6 1_555 A N LEU 7 A LEU 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 A C LYS 83 A LYS 83 1_555 A N MSE 84 A MSE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale5 A C MSE 84 A MSE 84 1_555 A N LYS 85 A LYS 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale6 A C PRO 86 A PRO 86 1_555 A N MSE 87 A MSE 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? 
covale ? covale7 A C MSE 87 A MSE 87 1_555 A N TYR 88 A TYR 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale8 A C SER 90 A SER 90 1_555 A N MSE 91 A MSE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale9 A C MSE 91 A MSE 91 1_555 A N ASP 92 A ASP 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale10 A C ALA 98 A ALA 98 1_555 A N MSE 99 A MSE 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? 
covale ? covale11 A C MSE 99 A MSE 99 1_555 A N ILE 100 A ILE 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? 
covale ? covale12 A C ASN 101 A ASN 101 1_555 A N MSE 102 A MSE 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? 
covale ? covale13 A C MSE 102 A MSE 102 1_555 A N VAL 103 A VAL 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale14 A C GLN 105 A GLN 105 1_555 A N MSE 106 A MSE 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
covale ? covale15 A C MSE 106 A MSE 106 1_555 A N GLY 107 A GLY 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale16 A C ARG 110 A ARG 110 1_555 A N MSE 111 A MSE 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? 
covale ? covale17 A C MSE 111 A MSE 111 1_555 A N ALA 112 A ALA 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale18 A C SER 117 A SER 117 1_555 A N MSE 118 A MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale19 A C MSE 118 A MSE 118 1_555 A N ARG 119 A ARG 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale20 A C ARG 119 A ARG 119 1_555 A N MSE 120 A MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale21 A C MSE 120 A MSE 120 1_555 A N MSE 121 A MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? 
covale ? covale22 A C MSE 121 A MSE 121 1_555 A N GLN 122 A GLN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.284 ? 
covale ? covale23 A C ASN 132 A ASN 132 1_555 A N MSE 133 A MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale24 A C MSE 133 A MSE 133 1_555 A N ALA 134 A ALA 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale25 A C THR 152 A THR 152 1_555 A N MSE 153 A MSE 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale26 A C MSE 153 A MSE 153 1_555 A N ARG 154 A ARG 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.288 ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                HED 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-HYDROXYETHYL DISULFIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 HED sing 129 n n 
C1 C2 HED sing 130 n n 
C1 H11 HED sing 131 n n 
C1 H12 HED sing 132 n n 
O1 HO1 HED sing 133 n n 
C2 S3 HED sing 134 n n 
C2 H21 HED sing 135 n n 
C2 H22 HED sing 136 n n 
S3 S4 HED sing 137 n n 
S4 C5 HED sing 138 n n 
C5 C6 HED sing 139 n n 
C5 H51 HED sing 140 n n 
C5 H52 HED sing 141 n n 
C6 O6 HED sing 142 n n 
C6 H61 HED sing 143 n n 
C6 H62 HED sing 144 n n 
O6 HO6 HED sing 145 n n 
#
_atom_sites.entry_id                     1LWK 
_atom_sites.fract_transf_matrix[1][1]    0.016575 
_atom_sites.fract_transf_matrix[1][2]    0.00957 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019139 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010945 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 167 167 CL CL . 
C 2 CL A 1 228 228 CL CL . 
D 3 HED A 1 901 901 HED HED . 
E 4 HOH A 1 168 168 HOH HOH . 
E 4 HOH A 2 169 169 HOH HOH . 
E 4 HOH A 3 170 170 HOH HOH . 
E 4 HOH A 4 171 171 HOH HOH . 
E 4 HOH A 5 172 172 HOH HOH . 
E 4 HOH A 6 173 173 HOH HOH . 
E 4 HOH A 7 174 174 HOH HOH . 
E 4 HOH A 8 181 181 HOH HOH . 
E 4 HOH A 9 182 182 HOH HOH . 
E 4 HOH A 10 185 185 HOH HOH . 
E 4 HOH A 11 187 187 HOH HOH . 
E 4 HOH A 12 189 189 HOH HOH . 
E 4 HOH A 13 191 191 HOH HOH . 
E 4 HOH A 14 195 195 HOH HOH . 
E 4 HOH A 15 196 196 HOH HOH . 
E 4 HOH A 16 197 197 HOH HOH . 
E 4 HOH A 17 198 198 HOH HOH . 
E 4 HOH A 18 204 204 HOH HOH . 
E 4 HOH A 19 205 205 HOH HOH . 
E 4 HOH A 20 206 206 HOH HOH . 
E 4 HOH A 21 207 207 HOH HOH . 
E 4 HOH A 22 208 208 HOH HOH . 
E 4 HOH A 23 209 209 HOH HOH . 
E 4 HOH A 24 212 212 HOH HOH . 
E 4 HOH A 25 215 215 HOH HOH . 
E 4 HOH A 26 219 219 HOH HOH . 
E 4 HOH A 27 227 227 HOH HOH . 
E 4 HOH A 28 230 230 HOH HOH . 
E 4 HOH A 29 231 231 HOH HOH . 
E 4 HOH A 30 232 232 HOH HOH . 
E 4 HOH A 31 233 233 HOH HOH . 
E 4 HOH A 32 234 234 HOH HOH . 
E 4 HOH A 33 237 237 HOH HOH . 
E 4 HOH A 34 238 238 HOH HOH . 
E 4 HOH A 35 239 239 HOH HOH . 
E 4 HOH A 36 241 241 HOH HOH . 
E 4 HOH A 37 243 243 HOH HOH . 
E 4 HOH A 38 246 246 HOH HOH . 
E 4 HOH A 39 247 247 HOH HOH . 
E 4 HOH A 40 248 248 HOH HOH . 
E 4 HOH A 41 249 249 HOH HOH . 
E 4 HOH A 42 251 251 HOH HOH . 
E 4 HOH A 43 252 252 HOH HOH . 
E 4 HOH A 44 253 253 HOH HOH . 
E 4 HOH A 45 257 257 HOH HOH . 
E 4 HOH A 46 260 260 HOH HOH . 
E 4 HOH A 47 261 261 HOH HOH . 
E 4 HOH A 48 262 262 HOH HOH . 
E 4 HOH A 49 263 263 HOH HOH . 
E 4 HOH A 50 264 264 HOH HOH . 
E 4 HOH A 51 265 265 HOH HOH . 
E 4 HOH A 52 274 274 HOH HOH . 
E 4 HOH A 53 276 276 HOH HOH . 
E 4 HOH A 54 277 277 HOH HOH . 
E 4 HOH A 55 279 279 HOH HOH . 
E 4 HOH A 56 282 282 HOH HOH . 
E 4 HOH A 57 283 283 HOH HOH . 
E 4 HOH A 58 284 284 HOH HOH . 
E 4 HOH A 59 285 285 HOH HOH . 
E 4 HOH A 60 288 288 HOH HOH . 
E 4 HOH A 61 289 289 HOH HOH . 
E 4 HOH A 62 304 304 HOH HOH . 
E 4 HOH A 63 305 305 HOH HOH . 
E 4 HOH A 64 306 306 HOH HOH . 
E 4 HOH A 65 307 307 HOH HOH . 
E 4 HOH A 66 308 308 HOH HOH . 
E 4 HOH A 67 309 309 HOH HOH . 
E 4 HOH A 68 316 316 HOH HOH . 
E 4 HOH A 69 323 323 HOH HOH . 
E 4 HOH A 70 325 325 HOH HOH . 
E 4 HOH A 71 331 331 HOH HOH . 
E 4 HOH A 72 333 333 HOH HOH . 
E 4 HOH A 73 336 336 HOH HOH . 
E 4 HOH A 74 340 340 HOH HOH . 
E 4 HOH A 75 344 344 HOH HOH . 
E 4 HOH A 76 356 356 HOH HOH . 
E 4 HOH A 77 357 357 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HED . . . D 3 33.032 2.803 21.841 1 51.56 ? C1 HED 901 A 1 
HETATM 2 O O1 HED . . . D 3 34.378 2.598 22.209 1 40.9 ? O1 HED 901 A 1 
HETATM 3 C C2 HED . . . D 3 32.441 1.513 21.223 1 28.24 ? C2 HED 901 A 1 
HETATM 4 S S3 HED . . . D 3 33.424 0.798 19.86 1 49.82 ? S3 HED 901 A 1 
HETATM 5 S S4 HED . . . D 3 33.267 2.134 18.341 1 43.5 ? S4 HED 901 A 1 
HETATM 6 C C5 HED . . . D 3 31.974 1.444 17.259 1 40.99 ? C5 HED 901 A 1 
HETATM 7 C C6 HED . . . D 3 32.08 -0.088 17.094 1 54.52 ? C6 HED 901 A 1 
HETATM 8 O O6 HED . . . D 3 32.918 -0.453 15.996 1 35.34 ? O6 HED 901 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           8 
#