data_1LY3
#
_model_server_result.job_id            7JrVW5PInty-548gfX8-zA 
_model_server_result.datetime_utc      '2024-11-29 07:30:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ly3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":307}' 
#
_entry.id    1LY3 
#
_exptl.entry_id    1LY3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              339.392 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "2,4-DIAMINO-6-[N-(2',5'-DIMETHOXYBENZYL)-N-METHYLAMINO]QUINAZOLINE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.77 
_cell.angle_gamma         90 
_cell.entry_id            1LY3 
_cell.length_a            37.373 
_cell.length_b            43.263 
_cell.length_c            61.372 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LY3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C18 H21 N5 O2' 
_chem_comp.formula_weight    339.392 
_chem_comp.id                COG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "2,4-DIAMINO-6-[N-(2',5'-DIMETHOXYBENZYL)-N-METHYLAMINO]QUINAZOLINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2B N1' COG doub 70 n y 
C2B N2' COG sing 71 n n 
C2B N3' COG sing 72 n y 
C4B C4A COG sing 73 n y 
C4B N3' COG doub 74 n y 
C4B N4' COG sing 75 n n 
C4A C5B COG doub 76 n y 
C4A C8A COG sing 77 n y 
C5B C6B COG sing 78 n y 
C5B H5' COG sing 79 n n 
C6B C7B COG doub 80 n y 
C6B N6' COG sing 81 n n 
C7B C8' COG sing 82 n y 
C7B H7' COG sing 83 n n 
C8A N1' COG sing 84 n y 
C8A C8' COG doub 85 n y 
C21 O2' COG sing 86 n n 
C21 H211 COG sing 87 n n 
C21 H212 COG sing 88 n n 
C21 H213 COG sing 89 n n 
C7' C1' COG sing 90 n n 
C7' N6' COG sing 91 n n 
C7' "H7'1" COG sing 92 n n 
C7' "H7'2" COG sing 93 n n 
C61 N6' COG sing 94 n n 
C61 H611 COG sing 95 n n 
C61 H612 COG sing 96 n n 
C61 H613 COG sing 97 n n 
C1' C2' COG doub 98 n y 
C1' C6' COG sing 99 n y 
C2' C3' COG sing 100 n y 
C2' O2' COG sing 101 n n 
C3' C4' COG doub 102 n y 
C3' H3' COG sing 103 n n 
C4' C5' COG sing 104 n y 
C4' H4' COG sing 105 n n 
C5' C6' COG doub 106 n y 
C5' O5' COG sing 107 n n 
C51 O5' COG sing 108 n n 
C51 H511 COG sing 109 n n 
C51 H512 COG sing 110 n n 
C51 H513 COG sing 111 n n 
C6' H6' COG sing 112 n n 
N2' HN21 COG sing 113 n n 
N2' HN22 COG sing 114 n n 
N4' HN41 COG sing 115 n n 
N4' HN42 COG sing 116 n n 
C8' H8' COG sing 117 n n 
#
_atom_sites.entry_id                     1LY3 
_atom_sites.fract_transf_matrix[1][1]    0.026757 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002233 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023114 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016351 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 207 207 NAP COE . 
C 3 COG A 1 307 207 COG COE . 
D 4 HOH A 1 208 208 HOH HOH . 
D 4 HOH A 2 209 209 HOH HOH . 
D 4 HOH A 3 210 210 HOH HOH . 
D 4 HOH A 4 211 211 HOH HOH . 
D 4 HOH A 5 212 212 HOH HOH . 
D 4 HOH A 6 213 213 HOH HOH . 
D 4 HOH A 7 214 214 HOH HOH . 
D 4 HOH A 8 215 215 HOH HOH . 
D 4 HOH A 9 216 216 HOH HOH . 
D 4 HOH A 10 217 217 HOH HOH . 
D 4 HOH A 11 218 218 HOH HOH . 
D 4 HOH A 12 219 219 HOH HOH . 
D 4 HOH A 13 220 220 HOH HOH . 
D 4 HOH A 14 221 221 HOH HOH . 
D 4 HOH A 15 222 222 HOH HOH . 
D 4 HOH A 16 223 223 HOH HOH . 
D 4 HOH A 17 224 224 HOH HOH . 
D 4 HOH A 18 225 225 HOH HOH . 
D 4 HOH A 19 226 226 HOH HOH . 
D 4 HOH A 20 227 227 HOH HOH . 
D 4 HOH A 21 228 228 HOH HOH . 
D 4 HOH A 22 229 229 HOH HOH . 
D 4 HOH A 23 230 230 HOH HOH . 
D 4 HOH A 24 231 231 HOH HOH . 
D 4 HOH A 25 232 232 HOH HOH . 
D 4 HOH A 26 233 233 HOH HOH . 
D 4 HOH A 27 234 234 HOH HOH . 
D 4 HOH A 28 235 235 HOH HOH . 
D 4 HOH A 29 236 236 HOH HOH . 
D 4 HOH A 30 237 237 HOH HOH . 
D 4 HOH A 31 238 238 HOH HOH . 
D 4 HOH A 32 239 239 HOH HOH . 
D 4 HOH A 33 240 240 HOH HOH . 
D 4 HOH A 34 241 241 HOH HOH . 
D 4 HOH A 35 242 242 HOH HOH . 
D 4 HOH A 36 243 243 HOH HOH . 
D 4 HOH A 37 244 244 HOH HOH . 
D 4 HOH A 38 245 245 HOH HOH . 
D 4 HOH A 39 246 246 HOH HOH . 
D 4 HOH A 40 247 247 HOH HOH . 
D 4 HOH A 41 248 248 HOH HOH . 
D 4 HOH A 42 249 249 HOH HOH . 
D 4 HOH A 43 250 250 HOH HOH . 
D 4 HOH A 44 251 251 HOH HOH . 
D 4 HOH A 45 252 252 HOH HOH . 
D 4 HOH A 46 253 253 HOH HOH . 
D 4 HOH A 47 254 254 HOH HOH . 
D 4 HOH A 48 255 255 HOH HOH . 
D 4 HOH A 49 256 256 HOH HOH . 
D 4 HOH A 50 257 257 HOH HOH . 
D 4 HOH A 51 258 258 HOH HOH . 
D 4 HOH A 52 259 259 HOH HOH . 
D 4 HOH A 53 260 260 HOH HOH . 
D 4 HOH A 54 261 261 HOH HOH . 
D 4 HOH A 55 262 262 HOH HOH . 
D 4 HOH A 56 263 263 HOH HOH . 
D 4 HOH A 57 264 264 HOH HOH . 
D 4 HOH A 58 265 265 HOH HOH . 
D 4 HOH A 59 266 266 HOH HOH . 
D 4 HOH A 60 267 267 HOH HOH . 
D 4 HOH A 61 268 268 HOH HOH . 
D 4 HOH A 62 269 269 HOH HOH . 
D 4 HOH A 63 270 270 HOH HOH . 
D 4 HOH A 64 271 271 HOH HOH . 
D 4 HOH A 65 272 272 HOH HOH . 
D 4 HOH A 66 273 273 HOH HOH . 
D 4 HOH A 67 274 274 HOH HOH . 
D 4 HOH A 68 275 275 HOH HOH . 
D 4 HOH A 69 276 276 HOH HOH . 
D 4 HOH A 70 277 277 HOH HOH . 
D 4 HOH A 71 278 278 HOH HOH . 
D 4 HOH A 72 279 279 HOH HOH . 
D 4 HOH A 73 280 280 HOH HOH . 
D 4 HOH A 74 281 281 HOH HOH . 
D 4 HOH A 75 282 282 HOH HOH . 
D 4 HOH A 76 283 283 HOH HOH . 
D 4 HOH A 77 284 284 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2B COG . . . C 3 10.371 2.352 12.54 1 14.49 ? C2B COG 307 A 1 
HETATM 2 C C4B COG . . . C 3 10.829 4.306 13.877 1 13.15 ? C4B COG 307 A 1 
HETATM 3 C C4A COG . . . C 3 11.978 4.556 13.102 1 15.44 ? C4A COG 307 A 1 
HETATM 4 C C5B COG . . . C 3 12.814 5.661 13.354 1 18.3 ? C5B COG 307 A 1 
HETATM 5 C C6B COG . . . C 3 13.96 5.846 12.555 1 23.03 ? C6B COG 307 A 1 
HETATM 6 C C7B COG . . . C 3 14.245 4.962 11.533 1 22.17 ? C7B COG 307 A 1 
HETATM 7 C C8A COG . . . C 3 12.279 3.691 12.032 1 16.73 ? C8A COG 307 A 1 
HETATM 8 C C21 COG . . . C 3 19.679 6.515 12.439 1 37.16 ? C21 COG 307 A 1 
HETATM 9 C C7' COG . . . C 3 16.116 7.073 12.806 1 29.71 ? C7' COG 307 A 1 
HETATM 10 C C61 COG . . . C 3 13.785 8.016 13.442 1 24.77 ? C61 COG 307 A 1 
HETATM 11 C C1' COG . . . C 3 16.485 7.31 11.333 1 32.5 ? C1' COG 307 A 1 
HETATM 12 C C2' COG . . . C 3 17.724 6.879 10.868 1 34.13 ? C2' COG 307 A 1 
HETATM 13 C C3' COG . . . C 3 18.07 7.132 9.539 1 34.84 ? C3' COG 307 A 1 
HETATM 14 C C4' COG . . . C 3 17.209 7.816 8.696 1 34.63 ? C4' COG 307 A 1 
HETATM 15 C C5' COG . . . C 3 15.992 8.272 9.189 1 35.01 ? C5' COG 307 A 1 
HETATM 16 C C51 COG . . . C 3 15.51 9.49 7.064 1 35.48 ? C51 COG 307 A 1 
HETATM 17 C C6' COG . . . C 3 15.639 8.026 10.51 1 33.37 ? C6' COG 307 A 1 
HETATM 18 N N1' COG . . . C 3 11.492 2.593 11.77 1 13.57 ? N1' COG 307 A 1 
HETATM 19 N N2' COG . . . C 3 9.524 1.266 12.24 1 14.18 ? N2' COG 307 A 1 
HETATM 20 N N3' COG . . . C 3 10.029 3.237 13.586 1 11.15 ? N3' COG 307 A 1 
HETATM 21 N N4' COG . . . C 3 10.446 5.087 14.987 1 8.55 ? N4' COG 307 A 1 
HETATM 22 C C8' COG . . . C 3 13.437 3.868 11.228 1 18.1 ? C8' COG 307 A 1 
HETATM 23 O O2' COG . . . C 3 18.594 6.173 11.63 1 36.31 ? O2' COG 307 A 1 
HETATM 24 O O5' COG . . . C 3 15.152 8.945 8.287 1 36.67 ? O5' COG 307 A 1 
HETATM 25 N N6' COG . . . C 3 14.684 6.999 12.92 1 27.62 ? N6' COG 307 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           25 
#