data_1LYI
#
_model_server_result.job_id            ch4j9AF-XKQlWVPJoglg4Q 
_model_server_result.datetime_utc      '2024-12-27 01:23:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1lyi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":902}' 
#
_entry.id    1LYI 
#
_exptl.entry_id    1LYI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BETA-MERCAPTOETHANOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1LYI 
_cell.length_a            60.9 
_cell.length_b            60.9 
_cell.length_c            96.9 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1LYI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            D 
_struct_conn.ptnr1_label_atom_id            S2 
_struct_conn.ptnr1_label_comp_id            BME 
_struct_conn.ptnr1_label_seq_id             . 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             BME 
_struct_conn.ptnr1_auth_seq_id              901 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            S2 
_struct_conn.ptnr2_label_comp_id            BME 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             BME 
_struct_conn.ptnr2_auth_seq_id              902 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.042 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                BME 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BETA-MERCAPTOETHANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BME sing 70 n n 
C1 O1 BME sing 71 n n 
C1 H11 BME sing 72 n n 
C1 H12 BME sing 73 n n 
C2 S2 BME sing 74 n n 
C2 H21 BME sing 75 n n 
C2 H22 BME sing 76 n n 
O1 HO1 BME sing 77 n n 
S2 HS2 BME sing 78 n n 
#
_atom_sites.entry_id                     1LYI 
_atom_sites.fract_transf_matrix[1][1]    0.01642 
_atom_sites.fract_transf_matrix[1][2]    0.00948 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018961 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01032 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 173 173 CL CL . 
C 2 CL A 1 178 178 CL CL . 
D 3 BME A 1 901 901 BME SEO . 
E 3 BME A 1 902 902 BME SEO . 
F 4 HOH A 1 171 171 HOH HOH . 
F 4 HOH A 2 172 172 HOH HOH . 
F 4 HOH A 3 174 174 HOH HOH . 
F 4 HOH A 4 175 175 HOH HOH . 
F 4 HOH A 5 176 176 HOH HOH . 
F 4 HOH A 6 177 177 HOH HOH . 
F 4 HOH A 7 179 179 HOH HOH . 
F 4 HOH A 8 180 180 HOH HOH . 
F 4 HOH A 9 181 181 HOH HOH . 
F 4 HOH A 10 182 182 HOH HOH . 
F 4 HOH A 11 183 183 HOH HOH . 
F 4 HOH A 12 184 184 HOH HOH . 
F 4 HOH A 13 185 185 HOH HOH . 
F 4 HOH A 14 186 186 HOH HOH . 
F 4 HOH A 15 187 187 HOH HOH . 
F 4 HOH A 16 188 188 HOH HOH . 
F 4 HOH A 17 189 189 HOH HOH . 
F 4 HOH A 18 190 190 HOH HOH . 
F 4 HOH A 19 191 191 HOH HOH . 
F 4 HOH A 20 192 192 HOH HOH . 
F 4 HOH A 21 193 193 HOH HOH . 
F 4 HOH A 22 194 194 HOH HOH . 
F 4 HOH A 23 195 195 HOH HOH . 
F 4 HOH A 24 196 196 HOH HOH . 
F 4 HOH A 25 197 197 HOH HOH . 
F 4 HOH A 26 198 198 HOH HOH . 
F 4 HOH A 27 200 200 HOH HOH . 
F 4 HOH A 28 201 201 HOH HOH . 
F 4 HOH A 29 202 202 HOH HOH . 
F 4 HOH A 30 203 203 HOH HOH . 
F 4 HOH A 31 204 204 HOH HOH . 
F 4 HOH A 32 206 206 HOH HOH . 
F 4 HOH A 33 207 207 HOH HOH . 
F 4 HOH A 34 208 208 HOH HOH . 
F 4 HOH A 35 209 209 HOH HOH . 
F 4 HOH A 36 210 210 HOH HOH . 
F 4 HOH A 37 211 211 HOH HOH . 
F 4 HOH A 38 212 212 HOH HOH . 
F 4 HOH A 39 213 213 HOH HOH . 
F 4 HOH A 40 214 214 HOH HOH . 
F 4 HOH A 41 215 215 HOH HOH . 
F 4 HOH A 42 216 216 HOH HOH . 
F 4 HOH A 43 217 217 HOH HOH . 
F 4 HOH A 44 218 218 HOH HOH . 
F 4 HOH A 45 219 219 HOH HOH . 
F 4 HOH A 46 220 220 HOH HOH . 
F 4 HOH A 47 221 221 HOH HOH . 
F 4 HOH A 48 222 222 HOH HOH . 
F 4 HOH A 49 223 223 HOH HOH . 
F 4 HOH A 50 224 224 HOH HOH . 
F 4 HOH A 51 225 225 HOH HOH . 
F 4 HOH A 52 226 226 HOH HOH . 
F 4 HOH A 53 227 227 HOH HOH . 
F 4 HOH A 54 228 228 HOH HOH . 
F 4 HOH A 55 229 229 HOH HOH . 
F 4 HOH A 56 230 230 HOH HOH . 
F 4 HOH A 57 231 231 HOH HOH . 
F 4 HOH A 58 232 232 HOH HOH . 
F 4 HOH A 59 233 233 HOH HOH . 
F 4 HOH A 60 234 234 HOH HOH . 
F 4 HOH A 61 235 235 HOH HOH . 
F 4 HOH A 62 236 236 HOH HOH . 
F 4 HOH A 63 237 237 HOH HOH . 
F 4 HOH A 64 238 238 HOH HOH . 
F 4 HOH A 65 239 239 HOH HOH . 
F 4 HOH A 66 240 240 HOH HOH . 
F 4 HOH A 67 242 242 HOH HOH . 
F 4 HOH A 68 244 244 HOH HOH . 
F 4 HOH A 69 245 245 HOH HOH . 
F 4 HOH A 70 246 246 HOH HOH . 
F 4 HOH A 71 247 247 HOH HOH . 
F 4 HOH A 72 248 248 HOH HOH . 
F 4 HOH A 73 249 249 HOH HOH . 
F 4 HOH A 74 250 250 HOH HOH . 
F 4 HOH A 75 251 251 HOH HOH . 
F 4 HOH A 76 253 253 HOH HOH . 
F 4 HOH A 77 254 254 HOH HOH . 
F 4 HOH A 78 256 256 HOH HOH . 
F 4 HOH A 79 259 259 HOH HOH . 
F 4 HOH A 80 261 261 HOH HOH . 
F 4 HOH A 81 262 262 HOH HOH . 
F 4 HOH A 82 263 263 HOH HOH . 
F 4 HOH A 83 265 265 HOH HOH . 
F 4 HOH A 84 266 266 HOH HOH . 
F 4 HOH A 85 267 267 HOH HOH . 
F 4 HOH A 86 268 268 HOH HOH . 
F 4 HOH A 87 269 269 HOH HOH . 
F 4 HOH A 88 270 270 HOH HOH . 
F 4 HOH A 89 271 271 HOH HOH . 
F 4 HOH A 90 272 272 HOH HOH . 
F 4 HOH A 91 273 273 HOH HOH . 
F 4 HOH A 92 274 274 HOH HOH . 
F 4 HOH A 93 275 275 HOH HOH . 
F 4 HOH A 94 276 276 HOH HOH . 
F 4 HOH A 95 277 277 HOH HOH . 
F 4 HOH A 96 278 278 HOH HOH . 
F 4 HOH A 97 279 279 HOH HOH . 
F 4 HOH A 98 280 280 HOH HOH . 
F 4 HOH A 99 281 281 HOH HOH . 
F 4 HOH A 100 282 282 HOH HOH . 
F 4 HOH A 101 283 283 HOH HOH . 
F 4 HOH A 102 284 284 HOH HOH . 
F 4 HOH A 103 285 285 HOH HOH . 
F 4 HOH A 104 286 286 HOH HOH . 
F 4 HOH A 105 288 288 HOH HOH . 
F 4 HOH A 106 289 289 HOH HOH . 
F 4 HOH A 107 290 290 HOH HOH . 
F 4 HOH A 108 291 291 HOH HOH . 
F 4 HOH A 109 292 292 HOH HOH . 
F 4 HOH A 110 293 293 HOH HOH . 
F 4 HOH A 111 294 294 HOH HOH . 
F 4 HOH A 112 295 295 HOH HOH . 
F 4 HOH A 113 296 296 HOH HOH . 
F 4 HOH A 114 298 298 HOH HOH . 
F 4 HOH A 115 299 299 HOH HOH . 
F 4 HOH A 116 300 300 HOH HOH . 
F 4 HOH A 117 301 301 HOH HOH . 
F 4 HOH A 118 302 302 HOH HOH . 
F 4 HOH A 119 303 303 HOH HOH . 
F 4 HOH A 120 304 304 HOH HOH . 
F 4 HOH A 121 306 306 HOH HOH . 
F 4 HOH A 122 307 307 HOH HOH . 
F 4 HOH A 123 308 308 HOH HOH . 
F 4 HOH A 124 309 309 HOH HOH . 
F 4 HOH A 125 311 311 HOH HOH . 
F 4 HOH A 126 312 312 HOH HOH . 
F 4 HOH A 127 313 313 HOH HOH . 
F 4 HOH A 128 314 314 HOH HOH . 
F 4 HOH A 129 315 315 HOH HOH . 
F 4 HOH A 130 316 316 HOH HOH . 
F 4 HOH A 131 318 318 HOH HOH . 
F 4 HOH A 132 320 320 HOH HOH . 
F 4 HOH A 133 322 322 HOH HOH . 
F 4 HOH A 134 591 591 HOH HOH . 
F 4 HOH A 135 592 592 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BME . . . E 3 33.792 -2.853 9.603 1 72.07 ? C1 BME 902 A 1 
HETATM 2 C C2 BME . . . E 3 32.861 -1.755 10.163 1 52.85 ? C2 BME 902 A 1 
HETATM 3 O O1 BME . . . E 3 34.73 -2.292 8.708 1 39.15 ? O1 BME 902 A 1 
HETATM 4 S S2 BME . . . E 3 33.707 -0.607 11.292 1 67.67 ? S2 BME 902 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#