data_1M0K # _model_server_result.job_id UwAAe75V0xVFYtRv3Tnmow _model_server_result.datetime_utc '2024-10-18 19:27:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":701}' # _entry.id 1M0K # _exptl.entry_id 1M0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.734 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,10,23-TRIMETHYL-TETRACOSANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1M0K _cell.length_a 61.179 _cell.length_b 61.179 _cell.length_c 111.146 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 30.5895 52.982568 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -30.5895 52.982568 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C15 _struct_conn.ptnr1_label_comp_id RET _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id RET _struct_conn.ptnr1_auth_seq_id 301 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id NZ _struct_conn.ptnr2_label_comp_id LYS _struct_conn.ptnr2_label_seq_id 229 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id LYS _struct_conn.ptnr2_auth_seq_id 216 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.321 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H56' _chem_comp.formula_weight 380.734 _chem_comp.id SQU _chem_comp.mon_nstd_flag . _chem_comp.name 2,10,23-TRIMETHYL-TETRACOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # _atom_sites.entry_id 1M0K _atom_sites.fract_transf_matrix[1][1] 0.016345 _atom_sites.fract_transf_matrix[1][2] 0.009437 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008997 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 301 RET RET . C 3 LI1 A 1 601 601 LI1 LI1 . D 3 LI1 A 1 602 602 LI1 LI1 . E 3 LI1 A 1 603 603 LI1 LI1 . F 3 LI1 A 1 604 604 LI1 LI1 . G 3 LI1 A 1 605 605 LI1 LI1 . H 3 LI1 A 1 606 606 LI1 LI1 . I 3 LI1 A 1 607 607 LI1 LI1 . J 3 LI1 A 1 608 608 LI1 LI1 . K 3 LI1 A 1 609 609 LI1 LI1 . L 3 LI1 A 1 610 610 LI1 LI1 . M 3 LI1 A 1 611 611 LI1 LI1 . N 3 LI1 A 1 612 612 LI1 LI1 . O 3 LI1 A 1 613 613 LI1 LI1 . P 4 SQU A 1 701 701 SQU SQU . Q 5 HOH A 1 401 401 HOH HOH . Q 5 HOH A 2 402 402 HOH HOH . Q 5 HOH A 3 403 403 HOH HOH . Q 5 HOH A 4 404 404 HOH HOH . Q 5 HOH A 5 405 405 HOH HOH . Q 5 HOH A 6 406 406 HOH HOH . Q 5 HOH A 7 407 407 HOH HOH . Q 5 HOH A 8 411 411 HOH HOH . Q 5 HOH A 9 412 412 HOH HOH . Q 5 HOH A 10 413 413 HOH HOH . Q 5 HOH A 11 414 414 HOH HOH . Q 5 HOH A 12 415 415 HOH HOH . Q 5 HOH A 13 416 416 HOH HOH . Q 5 HOH A 14 417 417 HOH HOH . Q 5 HOH A 15 418 418 HOH HOH . Q 5 HOH A 16 419 419 HOH HOH . Q 5 HOH A 17 420 420 HOH HOH . Q 5 HOH A 18 501 501 HOH HOH . Q 5 HOH A 19 502 502 HOH HOH . Q 5 HOH A 20 511 511 HOH HOH . Q 5 HOH A 21 512 512 HOH HOH . Q 5 HOH A 22 513 513 HOH HOH . Q 5 HOH A 23 514 514 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SQU . . . P 4 31.723 28.343 6.296 0.6 50.62 ? C1 SQU 701 A 1 HETATM 2 C C2 SQU . . . P 4 32.021 28.833 4.88 0.6 71.3 ? C2 SQU 701 A 1 HETATM 3 C C3 SQU . . . P 4 31.668 27.829 3.786 0.6 78.74 ? C3 SQU 701 A 1 HETATM 4 C C4 SQU . . . P 4 33.002 29.726 4.62 0.6 68.42 ? C4 SQU 701 A 1 HETATM 5 C C5 SQU . . . P 4 32.89 31.136 4.059 0.6 75.67 ? C5 SQU 701 A 1 HETATM 6 C C6 SQU . . . P 4 31.826 31.313 2.935 0.6 81.28 ? C6 SQU 701 A 1 HETATM 7 C C7 SQU . . . P 4 30.896 32.518 3.091 0.6 83.07 ? C7 SQU 701 A 1 HETATM 8 C C9 SQU . . . P 4 29.901 32.652 3.996 0.6 74.71 ? C9 SQU 701 A 1 HETATM 9 C C10 SQU . . . P 4 29.523 33.852 4.861 0.6 54.81 ? C10 SQU 701 A 1 HETATM 10 C C11 SQU . . . P 4 29.107 33.528 6.306 0.6 58.01 ? C11 SQU 701 A 1 HETATM 11 C C12 SQU . . . P 4 29.828 34.307 7.418 0.6 64.38 ? C12 SQU 701 A 1 HETATM 12 C C13 SQU . . . P 4 30.16 35.773 7.138 0.6 64.5 ? C13 SQU 701 A 1 HETATM 13 C C14 SQU . . . P 4 29.555 34.071 8.723 0.6 57.96 ? C14 SQU 701 A 1 HETATM 14 C C15 SQU . . . P 4 28.63 33.044 9.335 0.6 55.45 ? C15 SQU 701 A 1 HETATM 15 C C16 SQU . . . P 4 29.296 31.724 9.791 0.6 54.74 ? C16 SQU 701 A 1 HETATM 16 C C17 SQU . . . P 4 28.924 30.543 8.905 0.6 56.67 ? C17 SQU 701 A 1 HETATM 17 C C18 SQU . . . P 4 29.107 29.238 9.194 0.6 64.1 ? C18 SQU 701 A 1 HETATM 18 C C20 SQU . . . P 4 27.998 28.247 9.553 0.6 65.54 ? C20 SQU 701 A 1 HETATM 19 C C21 SQU . . . P 4 27.224 27.772 8.292 0.6 64.52 ? C21 SQU 701 A 1 HETATM 20 C C22 SQU . . . P 4 26.976 26.27 8.352 0.6 63.95 ? C22 SQU 701 A 1 HETATM 21 C C23 SQU . . . P 4 27.85 25.36 8.8 0.6 62.74 ? C23 SQU 701 A 1 HETATM 22 C C25 SQU . . . P 4 28.096 24.868 10.226 0.6 52.21 ? C25 SQU 701 A 1 HETATM 23 C C26 SQU . . . P 4 29.299 25.549 10.926 0.6 55.09 ? C26 SQU 701 A 1 HETATM 24 C C27 SQU . . . P 4 28.938 26.25 12.232 0.6 50.06 ? C27 SQU 701 A 1 HETATM 25 C C28 SQU . . . P 4 29.578 26.121 13.421 0.6 38.66 ? C28 SQU 701 A 1 HETATM 26 C C29 SQU . . . P 4 30.727 27.089 13.69 0.6 61.03 ? C29 SQU 701 A 1 HETATM 27 C C30 SQU . . . P 4 29.827 24.729 14.008 0.6 35.87 ? C30 SQU 701 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 608 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #