data_1M0L # _model_server_result.job_id OXQh67PaiWOGGxHIKaxSlg _model_server_result.datetime_utc '2024-10-31 07:25:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m0l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":701}' # _entry.id 1M0L # _exptl.entry_id 1M0L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.734 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,10,23-TRIMETHYL-TETRACOSANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1M0L _cell.length_a 60.94 _cell.length_b 60.94 _cell.length_c 110.55 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M0L _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 30.47 52.775588 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -30.47 52.775588 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id P _struct_conn.ptnr1_label_atom_id C15 _struct_conn.ptnr1_label_comp_id RET _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id RET _struct_conn.ptnr1_auth_seq_id 301 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id NZ _struct_conn.ptnr2_label_comp_id LYS _struct_conn.ptnr2_label_seq_id 229 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id LYS _struct_conn.ptnr2_auth_seq_id 216 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.321 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H56' _chem_comp.formula_weight 380.734 _chem_comp.id SQU _chem_comp.mon_nstd_flag . _chem_comp.name 2,10,23-TRIMETHYL-TETRACOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # _atom_sites.entry_id 1M0L _atom_sites.fract_transf_matrix[1][1] 0.01641 _atom_sites.fract_transf_matrix[1][2] 0.009474 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018948 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LI1 A 1 601 601 LI1 LI1 . C 2 LI1 A 1 602 602 LI1 LI1 . D 2 LI1 A 1 603 603 LI1 LI1 . E 2 LI1 A 1 604 604 LI1 LI1 . F 2 LI1 A 1 605 605 LI1 LI1 . G 2 LI1 A 1 606 606 LI1 LI1 . H 2 LI1 A 1 607 607 LI1 LI1 . I 2 LI1 A 1 608 608 LI1 LI1 . J 2 LI1 A 1 609 609 LI1 LI1 . K 2 LI1 A 1 610 610 LI1 LI1 . L 2 LI1 A 1 611 611 LI1 LI1 . M 2 LI1 A 1 612 612 LI1 LI1 . N 2 LI1 A 1 613 613 LI1 LI1 . O 3 SQU A 1 701 701 SQU SQU . P 4 RET A 1 301 301 RET RET . Q 5 HOH A 1 401 401 HOH HOH . Q 5 HOH A 2 402 402 HOH HOH . Q 5 HOH A 3 403 403 HOH HOH . Q 5 HOH A 4 404 404 HOH HOH . Q 5 HOH A 5 405 405 HOH HOH . Q 5 HOH A 6 406 406 HOH HOH . Q 5 HOH A 7 407 407 HOH HOH . Q 5 HOH A 8 411 411 HOH HOH . Q 5 HOH A 9 412 412 HOH HOH . Q 5 HOH A 10 413 413 HOH HOH . Q 5 HOH A 11 414 414 HOH HOH . Q 5 HOH A 12 415 415 HOH HOH . Q 5 HOH A 13 416 416 HOH HOH . Q 5 HOH A 14 417 417 HOH HOH . Q 5 HOH A 15 418 418 HOH HOH . Q 5 HOH A 16 419 419 HOH HOH . Q 5 HOH A 17 420 420 HOH HOH . Q 5 HOH A 18 501 501 HOH HOH . Q 5 HOH A 19 502 502 HOH HOH . Q 5 HOH A 20 511 511 HOH HOH . Q 5 HOH A 21 512 512 HOH HOH . Q 5 HOH A 22 513 513 HOH HOH . Q 5 HOH A 23 514 514 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SQU . . . O 3 31.422 28.59 6.431 1 64.64 ? C1 SQU 701 A 1 HETATM 2 C C2 SQU . . . O 3 31.781 28.686 4.944 1 75.41 ? C2 SQU 701 A 1 HETATM 3 C C3 SQU . . . O 3 31.484 27.399 4.146 1 78.19 ? C3 SQU 701 A 1 HETATM 4 C C4 SQU . . . O 3 32.769 29.476 4.476 1 68.19 ? C4 SQU 701 A 1 HETATM 5 C C5 SQU . . . O 3 32.773 30.969 4.19 1 65.64 ? C5 SQU 701 A 1 HETATM 6 C C6 SQU . . . O 3 31.733 31.448 3.138 1 64.86 ? C6 SQU 701 A 1 HETATM 7 C C7 SQU . . . O 3 30.952 32.713 3.53 1 68.06 ? C7 SQU 701 A 1 HETATM 8 C C9 SQU . . . O 3 29.819 32.766 4.257 1 63.39 ? C9 SQU 701 A 1 HETATM 9 C C10 SQU . . . O 3 29.341 33.772 5.293 1 55.72 ? C10 SQU 701 A 1 HETATM 10 C C11 SQU . . . O 3 29.247 33.252 6.751 1 59.79 ? C11 SQU 701 A 1 HETATM 11 C C12 SQU . . . O 3 29.732 34.24 7.828 1 64.61 ? C12 SQU 701 A 1 HETATM 12 C C13 SQU . . . O 3 29.993 35.684 7.379 1 65.61 ? C13 SQU 701 A 1 HETATM 13 C C14 SQU . . . O 3 29.348 34.145 9.123 1 66.23 ? C14 SQU 701 A 1 HETATM 14 C C15 SQU . . . O 3 28.771 32.969 9.885 1 68.9 ? C15 SQU 701 A 1 HETATM 15 C C16 SQU . . . O 3 29.582 31.647 9.832 1 62.85 ? C16 SQU 701 A 1 HETATM 16 C C17 SQU . . . O 3 28.928 30.598 8.934 1 65.54 ? C17 SQU 701 A 1 HETATM 17 C C18 SQU . . . O 3 29.27 29.3 8.821 1 71.49 ? C18 SQU 701 A 1 HETATM 18 C C20 SQU . . . O 3 28.427 28.091 9.257 1 66.55 ? C20 SQU 701 A 1 HETATM 19 C C21 SQU . . . O 3 27.189 27.874 8.355 1 63.43 ? C21 SQU 701 A 1 HETATM 20 C C22 SQU . . . O 3 27.041 26.384 7.961 1 61.85 ? C22 SQU 701 A 1 HETATM 21 C C23 SQU . . . O 3 27.653 25.378 8.603 1 64.05 ? C23 SQU 701 A 1 HETATM 22 C C25 SQU . . . O 3 27.573 25.017 10.09 1 57.84 ? C25 SQU 701 A 1 HETATM 23 C C26 SQU . . . O 3 28.868 25.279 10.899 1 57.91 ? C26 SQU 701 A 1 HETATM 24 C C27 SQU . . . O 3 28.673 26.233 12.084 1 55.86 ? C27 SQU 701 A 1 HETATM 25 C C28 SQU . . . O 3 29.241 26.088 13.317 1 47.61 ? C28 SQU 701 A 1 HETATM 26 C C29 SQU . . . O 3 30.471 26.97 13.575 1 57.08 ? C29 SQU 701 A 1 HETATM 27 C C30 SQU . . . O 3 29.464 24.661 13.854 1 54.16 ? C30 SQU 701 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #