data_1M0P # _model_server_result.job_id LmBOX5aVIqMi7cHum5KlBA _model_server_result.datetime_utc '2024-10-11 08:30:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m0p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":434}' # _entry.id 1M0P # _exptl.entry_id 1M0P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 430.286 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]-1-PHENYLETHYLPHOSPHONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1M0P _cell.length_a 150.77 _cell.length_b 150.77 _cell.length_c 84.63 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M0P _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 75.385 130.57065 0 3 'crystal symmetry operation' 7_555 y,x,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 28.21 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 75.385 130.57065 28.21 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 78 A LEU 78 1_555 B K K . A K 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc2 A N SER 80 A SER 80 1_555 B K K . A K 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.461 ? metalc ? metalc3 A OG SER 80 A SER 80 1_555 B K K . A K 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc4 A O ALA 95 A ALA 95 1_555 C NA NA . A NA 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc5 A O THR 98 A THR 98 1_555 C NA NA . A NA 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc6 A O PRO 99 A PRO 99 1_555 C NA NA . A NA 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc7 A O LEU 102 A LEU 102 1_555 C NA NA . A NA 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc8 A O THR 303 A THR 303 1_555 B K K . A K 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc9 A O VAL 305 A VAL 305 1_555 B K K . A K 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc10 A OD1 ASP 307 A ASP 307 1_555 B K K . A K 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc11 B K K . A K 435 1_555 E O HOH . A HOH 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? # _chem_comp.formula 'C16 H20 N2 O8 P2' _chem_comp.formula_weight 430.286 _chem_comp.id ELP _chem_comp.mon_nstd_flag . _chem_comp.name '(1R)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]-1-PHENYLETHYLPHOSPHONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C2 ELP doub 83 n y C3 C4 ELP sing 84 n y C3 O1 ELP sing 85 n n C2 N1 ELP sing 86 n y C2 C2A ELP sing 87 n n N1 C6 ELP doub 88 n y C6 C5 ELP sing 89 n y C6 HC6 ELP sing 90 n n C4 C4A ELP sing 91 n n C4 C5 ELP doub 92 n y C4A N2 ELP doub 93 n n C4A H4A ELP sing 94 n n N2 C ELP sing 95 n n C CA1 ELP sing 96 n n C CA2 ELP sing 97 n n C P2 ELP sing 98 n n CA1 HA11 ELP sing 99 n n CA1 HA12 ELP sing 100 n n CA1 HA13 ELP sing 101 n n CA2 CB2 ELP doub 102 n y CA2 CB1 ELP sing 103 n y P2 O6 ELP doub 104 n n P2 O7 ELP sing 105 n n P2 O8 ELP sing 106 n n O7 HO7 ELP sing 107 n n O8 HO8 ELP sing 108 n n O1 HO1 ELP sing 109 n n C2A H2A1 ELP sing 110 n n C2A H2A2 ELP sing 111 n n C2A H2A3 ELP sing 112 n n C5 C5A ELP sing 113 n n C5A O2 ELP sing 114 n n C5A H5A1 ELP sing 115 n n C5A H5A2 ELP sing 116 n n O2 P1 ELP sing 117 n n P1 O3 ELP doub 118 n n P1 O4 ELP sing 119 n n P1 O5 ELP sing 120 n n O4 HO4 ELP sing 121 n n O5 HO5 ELP sing 122 n n CB2 CG2 ELP sing 123 n y CB2 HB2 ELP sing 124 n n CG2 CD ELP doub 125 n y CG2 HG2 ELP sing 126 n n CD CG1 ELP sing 127 n y CD HCD ELP sing 128 n n CG1 CB1 ELP doub 129 n y CG1 HG1 ELP sing 130 n n CB1 HB1 ELP sing 131 n n # _atom_sites.entry_id 1M0P _atom_sites.fract_transf_matrix[1][1] 0.006633 _atom_sites.fract_transf_matrix[1][2] 0.003829 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007659 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011816 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 435 435 K K . C 3 NA A 1 436 436 NA NA . D 4 ELP A 1 434 434 ELP MPP . E 5 HOH A 1 437 437 HOH WAT . E 5 HOH A 2 438 438 HOH WAT . E 5 HOH A 3 439 439 HOH WAT . E 5 HOH A 4 440 440 HOH WAT . E 5 HOH A 5 441 441 HOH WAT . E 5 HOH A 6 442 442 HOH WAT . E 5 HOH A 7 443 443 HOH WAT . E 5 HOH A 8 444 444 HOH WAT . E 5 HOH A 9 445 445 HOH WAT . E 5 HOH A 10 446 446 HOH WAT . E 5 HOH A 11 447 447 HOH WAT . E 5 HOH A 12 448 448 HOH WAT . E 5 HOH A 13 449 449 HOH WAT . E 5 HOH A 14 450 450 HOH WAT . E 5 HOH A 15 451 451 HOH WAT . E 5 HOH A 16 452 452 HOH WAT . E 5 HOH A 17 453 453 HOH WAT . E 5 HOH A 18 454 454 HOH WAT . E 5 HOH A 19 455 455 HOH WAT . E 5 HOH A 20 456 456 HOH WAT . E 5 HOH A 21 457 457 HOH WAT . E 5 HOH A 22 458 458 HOH WAT . E 5 HOH A 23 459 459 HOH WAT . E 5 HOH A 24 460 460 HOH WAT . E 5 HOH A 25 461 461 HOH WAT . E 5 HOH A 26 462 462 HOH WAT . E 5 HOH A 27 463 463 HOH WAT . E 5 HOH A 28 464 464 HOH WAT . E 5 HOH A 29 465 465 HOH WAT . E 5 HOH A 30 466 466 HOH WAT . E 5 HOH A 31 467 467 HOH WAT . E 5 HOH A 32 468 468 HOH WAT . E 5 HOH A 33 469 469 HOH WAT . E 5 HOH A 34 470 470 HOH WAT . E 5 HOH A 35 471 471 HOH WAT . E 5 HOH A 36 472 472 HOH WAT . E 5 HOH A 37 473 473 HOH WAT . E 5 HOH A 38 474 474 HOH WAT . E 5 HOH A 39 475 475 HOH WAT . E 5 HOH A 40 476 476 HOH WAT . E 5 HOH A 41 477 477 HOH WAT . E 5 HOH A 42 478 478 HOH WAT . E 5 HOH A 43 479 479 HOH WAT . E 5 HOH A 44 480 480 HOH WAT . E 5 HOH A 45 481 481 HOH WAT . E 5 HOH A 46 482 482 HOH WAT . E 5 HOH A 47 483 483 HOH WAT . E 5 HOH A 48 484 484 HOH WAT . E 5 HOH A 49 485 485 HOH WAT . E 5 HOH A 50 486 486 HOH WAT . E 5 HOH A 51 487 487 HOH WAT . E 5 HOH A 52 488 488 HOH WAT . E 5 HOH A 53 489 489 HOH WAT . E 5 HOH A 54 490 490 HOH WAT . E 5 HOH A 55 491 491 HOH WAT . E 5 HOH A 56 492 492 HOH WAT . E 5 HOH A 57 493 493 HOH WAT . E 5 HOH A 58 494 494 HOH WAT . E 5 HOH A 59 495 495 HOH WAT . E 5 HOH A 60 496 496 HOH WAT . E 5 HOH A 61 497 497 HOH WAT . E 5 HOH A 62 498 498 HOH WAT . E 5 HOH A 63 499 499 HOH WAT . E 5 HOH A 64 500 500 HOH WAT . E 5 HOH A 65 501 501 HOH WAT . E 5 HOH A 66 502 502 HOH WAT . E 5 HOH A 67 503 503 HOH WAT . E 5 HOH A 68 504 504 HOH WAT . E 5 HOH A 69 505 505 HOH WAT . E 5 HOH A 70 506 506 HOH WAT . E 5 HOH A 71 507 507 HOH WAT . E 5 HOH A 72 508 508 HOH WAT . E 5 HOH A 73 509 509 HOH WAT . E 5 HOH A 74 510 510 HOH WAT . E 5 HOH A 75 511 511 HOH WAT . E 5 HOH A 76 512 512 HOH WAT . E 5 HOH A 77 513 513 HOH WAT . E 5 HOH A 78 514 514 HOH WAT . E 5 HOH A 79 515 515 HOH WAT . E 5 HOH A 80 516 516 HOH WAT . E 5 HOH A 81 517 517 HOH WAT . E 5 HOH A 82 518 518 HOH WAT . E 5 HOH A 83 519 519 HOH WAT . E 5 HOH A 84 520 520 HOH WAT . E 5 HOH A 85 521 521 HOH WAT . E 5 HOH A 86 522 522 HOH WAT . E 5 HOH A 87 523 523 HOH WAT . E 5 HOH A 88 524 524 HOH WAT . E 5 HOH A 89 525 525 HOH WAT . E 5 HOH A 90 526 526 HOH WAT . E 5 HOH A 91 527 527 HOH WAT . E 5 HOH A 92 528 528 HOH WAT . E 5 HOH A 93 529 529 HOH WAT . E 5 HOH A 94 530 530 HOH WAT . E 5 HOH A 95 531 531 HOH WAT . E 5 HOH A 96 532 532 HOH WAT . E 5 HOH A 97 533 533 HOH WAT . E 5 HOH A 98 534 534 HOH WAT . E 5 HOH A 99 535 535 HOH WAT . E 5 HOH A 100 536 536 HOH WAT . E 5 HOH A 101 537 537 HOH WAT . E 5 HOH A 102 538 538 HOH WAT . E 5 HOH A 103 539 539 HOH WAT . E 5 HOH A 104 540 540 HOH WAT . E 5 HOH A 105 541 541 HOH WAT . E 5 HOH A 106 542 542 HOH WAT . E 5 HOH A 107 543 543 HOH WAT . E 5 HOH A 108 544 544 HOH WAT . E 5 HOH A 109 545 545 HOH WAT . E 5 HOH A 110 546 546 HOH WAT . E 5 HOH A 111 547 547 HOH WAT . E 5 HOH A 112 548 548 HOH WAT . E 5 HOH A 113 549 549 HOH WAT . E 5 HOH A 114 550 550 HOH WAT . E 5 HOH A 115 551 551 HOH WAT . E 5 HOH A 116 552 552 HOH WAT . E 5 HOH A 117 553 553 HOH WAT . E 5 HOH A 118 554 554 HOH WAT . E 5 HOH A 119 555 555 HOH WAT . E 5 HOH A 120 556 556 HOH WAT . E 5 HOH A 121 557 557 HOH WAT . E 5 HOH A 122 558 558 HOH WAT . E 5 HOH A 123 559 559 HOH WAT . E 5 HOH A 124 560 560 HOH WAT . E 5 HOH A 125 561 561 HOH WAT . E 5 HOH A 126 562 562 HOH WAT . E 5 HOH A 127 563 563 HOH WAT . E 5 HOH A 128 564 564 HOH WAT . E 5 HOH A 129 565 565 HOH WAT . E 5 HOH A 130 566 566 HOH WAT . E 5 HOH A 131 567 567 HOH WAT . E 5 HOH A 132 568 568 HOH WAT . E 5 HOH A 133 569 569 HOH WAT . E 5 HOH A 134 570 570 HOH WAT . E 5 HOH A 135 571 571 HOH WAT . E 5 HOH A 136 572 572 HOH WAT . E 5 HOH A 137 573 573 HOH WAT . E 5 HOH A 138 574 574 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 ELP . . . D 4 15.85 52.38 15.997 1 52.92 ? C3 ELP 434 A 1 HETATM 2 C C2 ELP . . . D 4 16.089 52.988 14.708 1 47.93 ? C2 ELP 434 A 1 HETATM 3 N N1 ELP . . . D 4 17.219 52.647 13.955 1 43.69 ? N1 ELP 434 A 1 HETATM 4 C C6 ELP . . . D 4 18.145 51.746 14.454 1 41.83 ? C6 ELP 434 A 1 HETATM 5 C C4 ELP . . . D 4 16.789 51.397 16.545 1 53.64 ? C4 ELP 434 A 1 HETATM 6 C C4A ELP . . . D 4 16.534 50.701 17.887 1 57.17 ? C4A ELP 434 A 1 HETATM 7 N N2 ELP . . . D 4 16.468 51.375 18.946 1 58.88 ? N2 ELP 434 A 1 HETATM 8 C C ELP . . . D 4 15.948 50.972 20.211 1 57.5 ? C ELP 434 A 1 HETATM 9 C CA1 ELP . . . D 4 16.611 49.631 20.662 1 52.48 ? CA1 ELP 434 A 1 HETATM 10 C CA2 ELP . . . D 4 16.451 52.169 20.838 1 53.25 ? CA2 ELP 434 A 1 HETATM 11 P P2 ELP . . . D 4 14.21 51.031 20.297 1 63.26 ? P2 ELP 434 A 1 HETATM 12 O O6 ELP . . . D 4 13.808 51.164 21.766 1 66.49 ? O6 ELP 434 A 1 HETATM 13 O O7 ELP . . . D 4 13.624 52.202 19.542 1 60.62 ? O7 ELP 434 A 1 HETATM 14 O O8 ELP . . . D 4 13.612 49.81 19.706 1 61.67 ? O8 ELP 434 A 1 HETATM 15 O O1 ELP . . . D 4 14.742 52.79 16.676 1 57.7 ? O1 ELP 434 A 1 HETATM 16 C C2A ELP . . . D 4 15.095 54.004 14.192 1 45.97 ? C2A ELP 434 A 1 HETATM 17 C C5 ELP . . . D 4 17.962 51.095 15.741 1 40.59 ? C5 ELP 434 A 1 HETATM 18 C C5A ELP . . . D 4 19.028 50.2 16.286 1 41.93 ? C5A ELP 434 A 1 HETATM 19 O O2 ELP . . . D 4 18.881 48.853 15.834 1 42.84 ? O2 ELP 434 A 1 HETATM 20 P P1 ELP . . . D 4 19.892 48.005 16.593 1 42.16 ? P1 ELP 434 A 1 HETATM 21 O O3 ELP . . . D 4 19.472 46.616 16.438 1 40.14 ? O3 ELP 434 A 1 HETATM 22 O O4 ELP . . . D 4 21.236 48.125 16.086 1 36.03 ? O4 ELP 434 A 1 HETATM 23 O O5 ELP . . . D 4 19.723 48.294 17.999 1 45.21 ? O5 ELP 434 A 1 HETATM 24 C CB2 ELP . . . D 4 17.521 52.039 21.786 1 52.84 ? CB2 ELP 434 A 1 HETATM 25 C CG2 ELP . . . D 4 18.015 53.209 22.431 1 52.19 ? CG2 ELP 434 A 1 HETATM 26 C CD ELP . . . D 4 17.422 54.5 22.1 1 52.79 ? CD ELP 434 A 1 HETATM 27 C CG1 ELP . . . D 4 16.331 54.602 21.114 1 51.79 ? CG1 ELP 434 A 1 HETATM 28 C CB1 ELP . . . D 4 15.86 53.442 20.495 1 49.95 ? CB1 ELP 434 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #