data_1M2O # _model_server_result.job_id gLzRi34gKjoAYwkbs01BbQ _model_server_result.datetime_utc '2024-12-27 02:07:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":800}' # _entry.id 1M2O # _exptl.entry_id 1M2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1M2O _cell.length_a 47.196 _cell.length_b 151.158 _cell.length_c 271.625 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M2O _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 PISA,PQS dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 C,D,H,I,J,M 2 1 A,B,E,F,G,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 56 A CYS 56 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc2 A SG CYS 61 A CYS 61 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc3 A SG CYS 80 A CYS 80 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc4 A SG CYS 83 A CYS 83 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc5 B OG1 THR 37 B THR 37 1_555 F MG MG . B MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc6 B OG1 THR 54 B THR 54 1_555 F MG MG . B MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc7 F MG MG . B MG 210 1_555 G O2B GNP . B GNP 5200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc8 F MG MG . B MG 210 1_555 G O2G GNP . B GNP 5200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc9 F MG MG . B MG 210 1_555 L O HOH . B HOH 5203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc10 F MG MG . B MG 210 1_555 L O HOH . B HOH 5211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc11 C SG CYS 56 C CYS 56 1_555 H ZN ZN . C ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc12 C SG CYS 61 C CYS 61 1_555 H ZN ZN . C ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc13 C SG CYS 80 C CYS 80 1_555 H ZN ZN . C ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc14 C SG CYS 83 C CYS 83 1_555 H ZN ZN . C ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc15 D OG1 THR 37 D THR 37 1_555 I MG MG . D MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc16 D OG1 THR 54 D THR 54 1_555 I MG MG . D MG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc17 I MG MG . D MG 210 1_555 J O2B GNP . D GNP 7200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc18 I MG MG . D MG 210 1_555 J O2G GNP . D GNP 7200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1M2O _atom_sites.fract_transf_matrix[1][1] 0.021188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003682 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 800 800 ZN ZN . F 4 MG B 1 210 210 MG MG . G 5 GNP B 1 5200 5200 GNP GNP . H 3 ZN C 1 800 800 ZN ZN . I 4 MG D 1 210 210 MG MG . J 5 GNP D 1 7200 7200 GNP GNP . K 6 HOH A 1 801 1 HOH HOH . K 6 HOH A 2 802 2 HOH HOH . K 6 HOH A 3 803 4 HOH HOH . K 6 HOH A 4 804 6 HOH HOH . K 6 HOH A 5 805 7 HOH HOH . K 6 HOH A 6 806 9 HOH HOH . K 6 HOH A 7 807 10 HOH HOH . K 6 HOH A 8 808 11 HOH HOH . K 6 HOH A 9 809 13 HOH HOH . K 6 HOH A 10 810 14 HOH HOH . K 6 HOH A 11 811 16 HOH HOH . K 6 HOH A 12 812 17 HOH HOH . K 6 HOH A 13 813 18 HOH HOH . K 6 HOH A 14 814 19 HOH HOH . K 6 HOH A 15 815 20 HOH HOH . K 6 HOH A 16 816 21 HOH HOH . K 6 HOH A 17 817 22 HOH HOH . K 6 HOH A 18 818 23 HOH HOH . K 6 HOH A 19 819 24 HOH HOH . K 6 HOH A 20 820 25 HOH HOH . K 6 HOH A 21 821 27 HOH HOH . K 6 HOH A 22 822 30 HOH HOH . K 6 HOH A 23 823 31 HOH HOH . K 6 HOH A 24 824 32 HOH HOH . K 6 HOH A 25 825 33 HOH HOH . K 6 HOH A 26 826 34 HOH HOH . K 6 HOH A 27 827 45 HOH HOH . K 6 HOH A 28 828 46 HOH HOH . K 6 HOH A 29 829 48 HOH HOH . K 6 HOH A 30 830 49 HOH HOH . K 6 HOH A 31 831 50 HOH HOH . K 6 HOH A 32 832 51 HOH HOH . K 6 HOH A 33 833 52 HOH HOH . K 6 HOH A 34 834 53 HOH HOH . K 6 HOH A 35 835 54 HOH HOH . K 6 HOH A 36 836 56 HOH HOH . K 6 HOH A 37 837 57 HOH HOH . K 6 HOH A 38 838 59 HOH HOH . K 6 HOH A 39 839 61 HOH HOH . K 6 HOH A 40 840 63 HOH HOH . K 6 HOH A 41 841 64 HOH HOH . K 6 HOH A 42 842 65 HOH HOH . K 6 HOH A 43 843 66 HOH HOH . K 6 HOH A 44 844 67 HOH HOH . K 6 HOH A 45 845 68 HOH HOH . K 6 HOH A 46 846 69 HOH HOH . K 6 HOH A 47 847 70 HOH HOH . K 6 HOH A 48 848 73 HOH HOH . K 6 HOH A 49 849 76 HOH HOH . K 6 HOH A 50 850 86 HOH HOH . K 6 HOH A 51 851 87 HOH HOH . K 6 HOH A 52 852 88 HOH HOH . K 6 HOH A 53 853 90 HOH HOH . K 6 HOH A 54 854 91 HOH HOH . K 6 HOH A 55 855 92 HOH HOH . K 6 HOH A 56 856 93 HOH HOH . K 6 HOH A 57 857 94 HOH HOH . K 6 HOH A 58 858 95 HOH HOH . K 6 HOH A 59 859 96 HOH HOH . K 6 HOH A 60 860 99 HOH HOH . K 6 HOH A 61 861 101 HOH HOH . K 6 HOH A 62 862 103 HOH HOH . K 6 HOH A 63 863 104 HOH HOH . K 6 HOH A 64 864 105 HOH HOH . K 6 HOH A 65 865 106 HOH HOH . K 6 HOH A 66 866 108 HOH HOH . K 6 HOH A 67 867 109 HOH HOH . K 6 HOH A 68 868 112 HOH HOH . K 6 HOH A 69 869 113 HOH HOH . K 6 HOH A 70 870 114 HOH HOH . K 6 HOH A 71 871 115 HOH HOH . K 6 HOH A 72 872 117 HOH HOH . K 6 HOH A 73 873 118 HOH HOH . K 6 HOH A 74 874 120 HOH HOH . K 6 HOH A 75 875 121 HOH HOH . K 6 HOH A 76 876 122 HOH HOH . K 6 HOH A 77 877 123 HOH HOH . K 6 HOH A 78 878 124 HOH HOH . K 6 HOH A 79 879 127 HOH HOH . K 6 HOH A 80 880 128 HOH HOH . K 6 HOH A 81 881 129 HOH HOH . K 6 HOH A 82 882 130 HOH HOH . K 6 HOH A 83 883 131 HOH HOH . K 6 HOH A 84 884 132 HOH HOH . K 6 HOH A 85 885 133 HOH HOH . K 6 HOH A 86 886 134 HOH HOH . K 6 HOH A 87 887 135 HOH HOH . K 6 HOH A 88 888 136 HOH HOH . K 6 HOH A 89 889 137 HOH HOH . K 6 HOH A 90 890 138 HOH HOH . K 6 HOH A 91 891 140 HOH HOH . K 6 HOH A 92 892 141 HOH HOH . K 6 HOH A 93 893 142 HOH HOH . K 6 HOH A 94 894 143 HOH HOH . K 6 HOH A 95 895 144 HOH HOH . K 6 HOH A 96 896 145 HOH HOH . K 6 HOH A 97 897 146 HOH HOH . K 6 HOH A 98 898 148 HOH HOH . K 6 HOH A 99 899 149 HOH HOH . K 6 HOH A 100 900 150 HOH HOH . K 6 HOH A 101 901 151 HOH HOH . K 6 HOH A 102 902 152 HOH HOH . K 6 HOH A 103 903 154 HOH HOH . K 6 HOH A 104 904 155 HOH HOH . K 6 HOH A 105 905 156 HOH HOH . K 6 HOH A 106 906 157 HOH HOH . K 6 HOH A 107 907 158 HOH HOH . K 6 HOH A 108 908 159 HOH HOH . K 6 HOH A 109 909 160 HOH HOH . K 6 HOH A 110 910 161 HOH HOH . K 6 HOH A 111 911 163 HOH HOH . K 6 HOH A 112 912 164 HOH HOH . K 6 HOH A 113 913 168 HOH HOH . K 6 HOH A 114 914 171 HOH HOH . L 6 HOH B 1 5201 3 HOH HOH . L 6 HOH B 2 5202 5 HOH HOH . L 6 HOH B 3 5203 8 HOH HOH . L 6 HOH B 4 5204 12 HOH HOH . L 6 HOH B 5 5205 15 HOH HOH . L 6 HOH B 6 5206 47 HOH HOH . L 6 HOH B 7 5207 55 HOH HOH . L 6 HOH B 8 5208 58 HOH HOH . L 6 HOH B 9 5209 60 HOH HOH . L 6 HOH B 10 5210 62 HOH HOH . L 6 HOH B 11 5211 85 HOH HOH . L 6 HOH B 12 5212 89 HOH HOH . L 6 HOH B 13 5213 97 HOH HOH . L 6 HOH B 14 5214 98 HOH HOH . L 6 HOH B 15 5215 100 HOH HOH . L 6 HOH B 16 5216 102 HOH HOH . L 6 HOH B 17 5217 107 HOH HOH . L 6 HOH B 18 5218 110 HOH HOH . L 6 HOH B 19 5219 111 HOH HOH . L 6 HOH B 20 5220 116 HOH HOH . L 6 HOH B 21 5221 119 HOH HOH . L 6 HOH B 22 5222 125 HOH HOH . L 6 HOH B 23 5223 126 HOH HOH . L 6 HOH B 24 5224 139 HOH HOH . M 6 HOH C 1 801 26 HOH HOH . M 6 HOH C 2 802 28 HOH HOH . M 6 HOH C 3 803 29 HOH HOH . M 6 HOH C 4 804 35 HOH HOH . M 6 HOH C 5 805 36 HOH HOH . M 6 HOH C 6 806 37 HOH HOH . M 6 HOH C 7 807 38 HOH HOH . M 6 HOH C 8 808 39 HOH HOH . M 6 HOH C 9 809 40 HOH HOH . M 6 HOH C 10 810 41 HOH HOH . M 6 HOH C 11 811 42 HOH HOH . M 6 HOH C 12 812 43 HOH HOH . M 6 HOH C 13 813 44 HOH HOH . M 6 HOH C 14 814 71 HOH HOH . M 6 HOH C 15 815 72 HOH HOH . M 6 HOH C 16 816 74 HOH HOH . M 6 HOH C 17 817 75 HOH HOH . M 6 HOH C 18 818 77 HOH HOH . M 6 HOH C 19 819 78 HOH HOH . M 6 HOH C 20 820 79 HOH HOH . M 6 HOH C 21 821 80 HOH HOH . M 6 HOH C 22 822 81 HOH HOH . M 6 HOH C 23 823 82 HOH HOH . M 6 HOH C 24 824 83 HOH HOH . M 6 HOH C 25 825 84 HOH HOH . M 6 HOH C 26 826 147 HOH HOH . M 6 HOH C 27 827 153 HOH HOH . M 6 HOH C 28 828 162 HOH HOH . M 6 HOH C 29 829 165 HOH HOH . M 6 HOH C 30 830 166 HOH HOH . M 6 HOH C 31 831 167 HOH HOH . M 6 HOH C 32 832 169 HOH HOH . M 6 HOH C 33 833 170 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 17.288 _atom_site.Cartn_y 9.037 _atom_site.Cartn_z 117.489 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 800 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #