data_1M2P # _model_server_result.job_id 4WMnHF64dQzd4oDxIwmu6A _model_server_result.datetime_utc '2024-10-13 07:26:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m2p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":351}' # _entry.id 1M2P # _exptl.entry_id 1M2P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 285.208 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,8-DI-HYDROXY-4-NITRO-ANTHRAQUINONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.84 _cell.angle_gamma 90 _cell.entry_id 1M2P _cell.length_a 142.09 _cell.length_b 60.55 _cell.length_c 44.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H7 N O6' _chem_comp.formula_weight 285.208 _chem_comp.id HNA _chem_comp.mon_nstd_flag . _chem_comp.name 1,8-DI-HYDROXY-4-NITRO-ANTHRAQUINONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 HNA doub 150 n y C1 C6 HNA sing 151 n y C1 O1 HNA sing 152 n n C2 C3 HNA sing 153 n y C2 C16 HNA sing 154 n n C3 C4 HNA doub 155 n y C3 C13 HNA sing 156 n n C4 C5 HNA sing 157 n y C4 N4 HNA sing 158 n n C5 C6 HNA doub 159 n y C5 HC5 HNA sing 160 n n C6 HC6 HNA sing 161 n n C13 C14 HNA sing 162 n n C13 O13 HNA doub 163 n n C14 C15 HNA doub 164 n y C14 C25 HNA sing 165 n y C15 C16 HNA sing 166 n n C15 C22 HNA sing 167 n y C16 O16 HNA doub 168 n n C22 C23 HNA doub 169 n y C22 O22 HNA sing 170 n n C23 C24 HNA sing 171 n y C23 HC23 HNA sing 172 n n C24 C25 HNA doub 173 n y C24 HC24 HNA sing 174 n n C25 HC25 HNA sing 175 n n O1 HO1 HNA sing 176 n n O22 HO22 HNA sing 177 n n N4 O4B HNA sing 178 n n N4 O4A HNA doub 179 n n # _atom_sites.entry_id 1M2P _atom_sites.fract_transf_matrix[1][1] 0.007038 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001604 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022802 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HNA A 1 351 1 HNA MNA . C 3 HOH A 1 352 1 HOH TIP . C 3 HOH A 2 353 2 HOH TIP . C 3 HOH A 3 354 3 HOH TIP . C 3 HOH A 4 355 4 HOH TIP . C 3 HOH A 5 356 5 HOH TIP . C 3 HOH A 6 357 6 HOH TIP . C 3 HOH A 7 358 7 HOH TIP . C 3 HOH A 8 359 8 HOH TIP . C 3 HOH A 9 360 9 HOH TIP . C 3 HOH A 10 361 10 HOH TIP . C 3 HOH A 11 362 11 HOH TIP . C 3 HOH A 12 363 12 HOH TIP . C 3 HOH A 13 364 13 HOH TIP . C 3 HOH A 14 365 14 HOH TIP . C 3 HOH A 15 366 15 HOH TIP . C 3 HOH A 16 367 16 HOH TIP . C 3 HOH A 17 368 17 HOH TIP . C 3 HOH A 18 369 18 HOH TIP . C 3 HOH A 19 370 19 HOH TIP . C 3 HOH A 20 371 20 HOH TIP . C 3 HOH A 21 372 21 HOH TIP . C 3 HOH A 22 373 22 HOH TIP . C 3 HOH A 23 374 23 HOH TIP . C 3 HOH A 24 375 24 HOH TIP . C 3 HOH A 25 376 25 HOH TIP . C 3 HOH A 26 377 26 HOH TIP . C 3 HOH A 27 378 27 HOH TIP . C 3 HOH A 28 379 28 HOH TIP . C 3 HOH A 29 380 29 HOH TIP . C 3 HOH A 30 381 30 HOH TIP . C 3 HOH A 31 382 31 HOH TIP . C 3 HOH A 32 383 32 HOH TIP . C 3 HOH A 33 384 33 HOH TIP . C 3 HOH A 34 385 34 HOH TIP . C 3 HOH A 35 386 35 HOH TIP . C 3 HOH A 36 387 36 HOH TIP . C 3 HOH A 37 388 37 HOH TIP . C 3 HOH A 38 389 38 HOH TIP . C 3 HOH A 39 390 39 HOH TIP . C 3 HOH A 40 391 40 HOH TIP . C 3 HOH A 41 392 41 HOH TIP . C 3 HOH A 42 393 42 HOH TIP . C 3 HOH A 43 394 43 HOH TIP . C 3 HOH A 44 395 44 HOH TIP . C 3 HOH A 45 396 45 HOH TIP . C 3 HOH A 46 397 46 HOH TIP . C 3 HOH A 47 398 47 HOH TIP . C 3 HOH A 48 399 48 HOH TIP . C 3 HOH A 49 400 49 HOH TIP . C 3 HOH A 50 401 50 HOH TIP . C 3 HOH A 51 402 51 HOH TIP . C 3 HOH A 52 403 52 HOH TIP . C 3 HOH A 53 404 53 HOH TIP . C 3 HOH A 54 405 54 HOH TIP . C 3 HOH A 55 406 55 HOH TIP . C 3 HOH A 56 407 56 HOH TIP . C 3 HOH A 57 408 57 HOH TIP . C 3 HOH A 58 409 58 HOH TIP . C 3 HOH A 59 410 59 HOH TIP . C 3 HOH A 60 411 60 HOH TIP . C 3 HOH A 61 412 61 HOH TIP . C 3 HOH A 62 413 62 HOH TIP . C 3 HOH A 63 414 63 HOH TIP . C 3 HOH A 64 415 64 HOH TIP . C 3 HOH A 65 416 65 HOH TIP . C 3 HOH A 66 417 66 HOH TIP . C 3 HOH A 67 418 67 HOH TIP . C 3 HOH A 68 419 68 HOH TIP . C 3 HOH A 69 420 69 HOH TIP . C 3 HOH A 70 421 70 HOH TIP . C 3 HOH A 71 422 71 HOH TIP . C 3 HOH A 72 423 72 HOH TIP . C 3 HOH A 73 424 73 HOH TIP . C 3 HOH A 74 425 74 HOH TIP . C 3 HOH A 75 426 76 HOH TIP . C 3 HOH A 76 427 77 HOH TIP . C 3 HOH A 77 428 78 HOH TIP . C 3 HOH A 78 429 79 HOH TIP . C 3 HOH A 79 430 80 HOH TIP . C 3 HOH A 80 431 81 HOH TIP . C 3 HOH A 81 432 82 HOH TIP . C 3 HOH A 82 433 83 HOH TIP . C 3 HOH A 83 434 84 HOH TIP . C 3 HOH A 84 435 85 HOH TIP . C 3 HOH A 85 436 86 HOH TIP . C 3 HOH A 86 437 87 HOH TIP . C 3 HOH A 87 438 88 HOH TIP . C 3 HOH A 88 439 89 HOH TIP . C 3 HOH A 89 440 90 HOH TIP . C 3 HOH A 90 441 91 HOH TIP . C 3 HOH A 91 442 92 HOH TIP . C 3 HOH A 92 443 93 HOH TIP . C 3 HOH A 93 444 94 HOH TIP . C 3 HOH A 94 445 95 HOH TIP . C 3 HOH A 95 446 96 HOH TIP . C 3 HOH A 96 447 97 HOH TIP . C 3 HOH A 97 448 98 HOH TIP . C 3 HOH A 98 449 99 HOH TIP . C 3 HOH A 99 450 101 HOH TIP . C 3 HOH A 100 451 102 HOH TIP . C 3 HOH A 101 452 103 HOH TIP . C 3 HOH A 102 453 104 HOH TIP . C 3 HOH A 103 454 105 HOH TIP . C 3 HOH A 104 455 106 HOH TIP . C 3 HOH A 105 456 107 HOH TIP . C 3 HOH A 106 457 108 HOH TIP . C 3 HOH A 107 458 109 HOH TIP . C 3 HOH A 108 459 110 HOH TIP . C 3 HOH A 109 460 111 HOH TIP . C 3 HOH A 110 461 112 HOH TIP . C 3 HOH A 111 462 113 HOH TIP . C 3 HOH A 112 463 114 HOH TIP . C 3 HOH A 113 464 115 HOH TIP . C 3 HOH A 114 465 117 HOH TIP . C 3 HOH A 115 466 118 HOH TIP . C 3 HOH A 116 467 119 HOH TIP . C 3 HOH A 117 468 120 HOH TIP . C 3 HOH A 118 469 121 HOH TIP . C 3 HOH A 119 470 122 HOH TIP . C 3 HOH A 120 471 123 HOH TIP . C 3 HOH A 121 472 124 HOH TIP . C 3 HOH A 122 473 125 HOH TIP . C 3 HOH A 123 474 126 HOH TIP . C 3 HOH A 124 475 127 HOH TIP . C 3 HOH A 125 476 128 HOH TIP . C 3 HOH A 126 477 129 HOH TIP . C 3 HOH A 127 478 130 HOH TIP . C 3 HOH A 128 479 131 HOH TIP . C 3 HOH A 129 480 132 HOH TIP . C 3 HOH A 130 481 133 HOH TIP . C 3 HOH A 131 482 134 HOH TIP . C 3 HOH A 132 483 135 HOH TIP . C 3 HOH A 133 484 136 HOH TIP . C 3 HOH A 134 485 138 HOH TIP . C 3 HOH A 135 486 139 HOH TIP . C 3 HOH A 136 487 140 HOH TIP . C 3 HOH A 137 488 141 HOH TIP . C 3 HOH A 138 489 142 HOH TIP . C 3 HOH A 139 490 143 HOH TIP . C 3 HOH A 140 491 144 HOH TIP . C 3 HOH A 141 492 145 HOH TIP . C 3 HOH A 142 493 146 HOH TIP . C 3 HOH A 143 494 147 HOH TIP . C 3 HOH A 144 495 148 HOH TIP . C 3 HOH A 145 496 149 HOH TIP . C 3 HOH A 146 497 150 HOH TIP . C 3 HOH A 147 498 152 HOH TIP . C 3 HOH A 148 499 153 HOH TIP . C 3 HOH A 149 500 154 HOH TIP . C 3 HOH A 150 501 155 HOH TIP . C 3 HOH A 151 502 156 HOH TIP . C 3 HOH A 152 503 157 HOH TIP . C 3 HOH A 153 504 158 HOH TIP . C 3 HOH A 154 505 159 HOH TIP . C 3 HOH A 155 506 160 HOH TIP . C 3 HOH A 156 507 161 HOH TIP . C 3 HOH A 157 508 162 HOH TIP . C 3 HOH A 158 509 163 HOH TIP . C 3 HOH A 159 510 164 HOH TIP . C 3 HOH A 160 511 165 HOH TIP . C 3 HOH A 161 512 166 HOH TIP . C 3 HOH A 162 513 167 HOH TIP . C 3 HOH A 163 514 168 HOH TIP . C 3 HOH A 164 515 169 HOH TIP . C 3 HOH A 165 516 170 HOH TIP . C 3 HOH A 166 517 171 HOH TIP . C 3 HOH A 167 518 172 HOH TIP . C 3 HOH A 168 519 173 HOH TIP . C 3 HOH A 169 520 174 HOH TIP . C 3 HOH A 170 521 175 HOH TIP . C 3 HOH A 171 522 176 HOH TIP . C 3 HOH A 172 523 177 HOH TIP . C 3 HOH A 173 524 178 HOH TIP . C 3 HOH A 174 525 179 HOH TIP . C 3 HOH A 175 526 180 HOH TIP . C 3 HOH A 176 527 181 HOH TIP . C 3 HOH A 177 528 182 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HNA . A . B 2 25.473 3.551 18.002 0.66 34.29 ? C1 HNA 351 A 1 HETATM 2 C C1 HNA . B . B 2 23.953 7.355 15.073 0.32 32.88 ? C1 HNA 351 A 1 HETATM 3 C C2 HNA . A . B 2 24.712 4.767 17.875 0.66 33.4 ? C2 HNA 351 A 1 HETATM 4 C C2 HNA . B . B 2 23.941 6.667 16.336 0.32 33.71 ? C2 HNA 351 A 1 HETATM 5 C C3 HNA . A . B 2 23.966 5.27 19.004 0.66 34.36 ? C3 HNA 351 A 1 HETATM 6 C C3 HNA . B . B 2 23.201 7.223 17.446 0.32 34.09 ? C3 HNA 351 A 1 HETATM 7 C C4 HNA . A . B 2 23.997 4.544 20.221 0.66 36.64 ? C4 HNA 351 A 1 HETATM 8 C C4 HNA . B . B 2 22.442 8.402 17.244 0.32 35.71 ? C4 HNA 351 A 1 HETATM 9 C C5 HNA . A . B 2 24.751 3.341 20.31 0.66 37.04 ? C5 HNA 351 A 1 HETATM 10 C C5 HNA . B . B 2 22.471 9.056 15.984 0.32 35.31 ? C5 HNA 351 A 1 HETATM 11 C C6 HNA . A . B 2 25.488 2.846 19.218 0.66 35.57 ? C6 HNA 351 A 1 HETATM 12 C C6 HNA . B . B 2 23.206 8.536 14.899 0.32 34.43 ? C6 HNA 351 A 1 HETATM 13 C C13 HNA . A . B 2 23.193 6.565 18.822 0.66 32.46 ? C13 HNA 351 A 1 HETATM 14 C C13 HNA . B . B 2 23.211 6.455 18.754 0.32 33.44 ? C13 HNA 351 A 1 HETATM 15 C C14 HNA . A . B 2 23.188 7.281 17.53 0.66 29.49 ? C14 HNA 351 A 1 HETATM 16 C C14 HNA . B . B 2 24.008 5.218 18.911 0.32 32.68 ? C14 HNA 351 A 1 HETATM 17 C C15 HNA . A . B 2 23.913 6.776 16.407 0.66 29.16 ? C15 HNA 351 A 1 HETATM 18 C C15 HNA . B . B 2 24.763 4.681 17.817 0.32 32.73 ? C15 HNA 351 A 1 HETATM 19 C C16 HNA . A . B 2 24.7 5.509 16.564 0.66 27.98 ? C16 HNA 351 A 1 HETATM 20 C C16 HNA . B . B 2 24.759 5.402 16.514 0.32 31.73 ? C16 HNA 351 A 1 HETATM 21 C C22 HNA . A . B 2 23.874 7.506 15.161 0.66 24.74 ? C22 HNA 351 A 1 HETATM 22 C C22 HNA . B . B 2 25.517 3.47 18.011 0.32 32.19 ? C22 HNA 351 A 1 HETATM 23 C C23 HNA . A . B 2 23.123 8.705 15.07 0.66 26.95 ? C23 HNA 351 A 1 HETATM 24 C C23 HNA . B . B 2 25.495 2.82 19.272 0.32 31.56 ? C23 HNA 351 A 1 HETATM 25 C C24 HNA . A . B 2 22.412 9.2 16.192 0.66 25.52 ? C24 HNA 351 A 1 HETATM 26 C C24 HNA . B . B 2 24.738 3.353 20.342 0.32 31.4 ? C24 HNA 351 A 1 HETATM 27 C C25 HNA . A . B 2 22.442 8.492 17.411 0.66 28.1 ? C25 HNA 351 A 1 HETATM 28 C C25 HNA . B . B 2 23.998 4.544 20.163 0.32 31.32 ? C25 HNA 351 A 1 HETATM 29 O O16 HNA . A . B 2 25.334 5.062 15.61 0.66 29.77 ? O16 HNA 351 A 1 HETATM 30 O O16 HNA . B . B 2 25.407 4.948 15.568 0.32 32.83 ? O16 HNA 351 A 1 HETATM 31 O O13 HNA . A . B 2 22.532 7.067 19.728 0.66 34.91 ? O13 HNA 351 A 1 HETATM 32 O O13 HNA . B . B 2 22.598 6.846 19.745 0.32 34.45 ? O13 HNA 351 A 1 HETATM 33 O O1 HNA . A . B 2 26.207 3.038 16.947 0.66 35.07 ? O1 HNA 351 A 1 HETATM 34 O O1 HNA . B . B 2 24.658 6.873 13.988 0.32 31.82 ? O1 HNA 351 A 1 HETATM 35 O O22 HNA . A . B 2 24.542 7.067 14.028 0.66 21.96 ? O22 HNA 351 A 1 HETATM 36 O O22 HNA . B . B 2 26.279 2.903 16.992 0.32 33.68 ? O22 HNA 351 A 1 HETATM 37 N N4 HNA . A . B 2 23.309 4.891 21.433 0.66 38.72 ? N4 HNA 351 A 1 HETATM 38 N N4 HNA . B . B 2 21.642 9.073 18.225 0.32 37.14 ? N4 HNA 351 A 1 HETATM 39 O O4B HNA . A . B 2 22.082 4.492 21.549 0.66 41.11 ? O4B HNA 351 A 1 HETATM 40 O O4B HNA . B . B 2 22.251 9.683 19.178 0.32 38.09 ? O4B HNA 351 A 1 HETATM 41 O O4A HNA . A . B 2 23.802 5.561 22.375 0.66 42.08 ? O4A HNA 351 A 1 HETATM 42 O O4A HNA . B . B 2 20.383 9.081 18.231 0.32 38.9 ? O4A HNA 351 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 51 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 504 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 42 #