data_1M2Z # _model_server_result.job_id U0U9j5SkBBVPvSAmUUlk6w _model_server_result.datetime_utc '2024-10-10 23:34:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 1M2Z # _exptl.entry_id 1M2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.461 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DEXAMETHASONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1M2Z _cell.length_a 125.843 _cell.length_b 125.843 _cell.length_c 85.976 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N # _chem_comp.formula 'C22 H29 F O5' _chem_comp.formula_weight 392.461 _chem_comp.id DEX _chem_comp.mon_nstd_flag . _chem_comp.name DEXAMETHASONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 9A-FLUORO-16BETA-METHYLPREDNISOLONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DEX doub 131 n n C1 C10 DEX sing 132 n n C1 H1 DEX sing 133 n n C2 C3 DEX sing 134 n n C2 H2 DEX sing 135 n n C3 C4 DEX sing 136 n n C3 O1 DEX doub 137 n n C4 C5 DEX doub 138 n n C4 H4 DEX sing 139 n n C5 C6 DEX sing 140 n n C5 C10 DEX sing 141 n n C6 C7 DEX sing 142 n n C6 H61 DEX sing 143 n n C6 H62 DEX sing 144 n n C7 C8 DEX sing 145 n n C7 H71 DEX sing 146 n n C7 H72 DEX sing 147 n n C8 C9 DEX sing 148 n n C8 C14 DEX sing 149 n n C8 H8 DEX sing 150 n n C9 C10 DEX sing 151 n n C9 C11 DEX sing 152 n n C9 F1 DEX sing 153 n n C10 C19 DEX sing 154 n n C11 C12 DEX sing 155 n n C11 O2 DEX sing 156 n n C11 H11 DEX sing 157 n n C12 C13 DEX sing 158 n n C12 H211 DEX sing 159 n n C12 H221 DEX sing 160 n n C13 C14 DEX sing 161 n n C13 C17 DEX sing 162 n n C13 C18 DEX sing 163 n n C14 C15 DEX sing 164 n n C14 H14 DEX sing 165 n n C15 C16 DEX sing 166 n n C15 H511 DEX sing 167 n n C15 H521 DEX sing 168 n n C16 C17 DEX sing 169 n n C16 C22 DEX sing 170 n n C16 H16 DEX sing 171 n n C17 C20 DEX sing 172 n n C17 O3 DEX sing 173 n n C18 H811 DEX sing 174 n n C18 H821 DEX sing 175 n n C18 H831 DEX sing 176 n n C19 H911 DEX sing 177 n n C19 H921 DEX sing 178 n n C19 H931 DEX sing 179 n n C20 C21 DEX sing 180 n n C20 O4 DEX doub 181 n n C21 O5 DEX sing 182 n n C21 H112 DEX sing 183 n n C21 H122 DEX sing 184 n n C22 H212 DEX sing 185 n n C22 H222 DEX sing 186 n n C22 H232 DEX sing 187 n n O2 HO2 DEX sing 188 n n O3 H3 DEX sing 189 n n O5 H5 DEX sing 190 n n # _atom_sites.entry_id 1M2Z _atom_sites.fract_transf_matrix[1][1] 0.007946 _atom_sites.fract_transf_matrix[1][2] 0.004588 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009176 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 BOG A 1 501 1 BOG DET . F 3 BOG A 1 778 1 BOG DET . G 3 BOG A 1 779 1 BOG DET . H 4 DEX A 1 301 1 DEX DEX . I 4 DEX D 1 401 1 DEX DEX . J 5 HOH A 1 2 2 HOH HOH . J 5 HOH A 2 4 4 HOH HOH . J 5 HOH A 3 6 6 HOH HOH . J 5 HOH A 4 10 10 HOH HOH . J 5 HOH A 5 11 11 HOH HOH . J 5 HOH A 6 12 12 HOH HOH . J 5 HOH A 7 14 14 HOH HOH . J 5 HOH A 8 15 15 HOH HOH . J 5 HOH A 9 16 16 HOH HOH . J 5 HOH A 10 19 19 HOH HOH . J 5 HOH A 11 20 20 HOH HOH . J 5 HOH A 12 21 21 HOH HOH . J 5 HOH A 13 23 23 HOH HOH . J 5 HOH A 14 24 24 HOH HOH . J 5 HOH A 15 27 27 HOH HOH . J 5 HOH A 16 29 29 HOH HOH . J 5 HOH A 17 33 33 HOH HOH . J 5 HOH A 18 34 34 HOH HOH . J 5 HOH A 19 36 36 HOH HOH . J 5 HOH A 20 39 39 HOH HOH . J 5 HOH A 21 40 40 HOH HOH . J 5 HOH A 22 42 42 HOH HOH . J 5 HOH A 23 45 45 HOH HOH . J 5 HOH A 24 46 46 HOH HOH . J 5 HOH A 25 47 47 HOH HOH . J 5 HOH A 26 48 48 HOH HOH . J 5 HOH A 27 49 49 HOH HOH . J 5 HOH A 28 52 52 HOH HOH . J 5 HOH A 29 53 53 HOH HOH . J 5 HOH A 30 54 54 HOH HOH . J 5 HOH A 31 56 56 HOH HOH . J 5 HOH A 32 58 58 HOH HOH . J 5 HOH A 33 59 59 HOH HOH . J 5 HOH A 34 61 61 HOH HOH . J 5 HOH A 35 66 66 HOH HOH . J 5 HOH A 36 68 68 HOH HOH . J 5 HOH A 37 69 69 HOH HOH . J 5 HOH A 38 70 70 HOH HOH . J 5 HOH A 39 71 71 HOH HOH . J 5 HOH A 40 75 75 HOH HOH . J 5 HOH A 41 77 77 HOH HOH . J 5 HOH A 42 78 78 HOH HOH . J 5 HOH A 43 80 80 HOH HOH . J 5 HOH A 44 82 82 HOH HOH . J 5 HOH A 45 85 85 HOH HOH . J 5 HOH A 46 86 86 HOH HOH . J 5 HOH A 47 90 90 HOH HOH . J 5 HOH A 48 92 92 HOH HOH . J 5 HOH A 49 98 98 HOH HOH . J 5 HOH A 50 100 100 HOH HOH . J 5 HOH A 51 101 101 HOH HOH . J 5 HOH A 52 102 102 HOH HOH . J 5 HOH A 53 105 105 HOH HOH . J 5 HOH A 54 106 106 HOH HOH . J 5 HOH A 55 108 108 HOH HOH . J 5 HOH A 56 110 110 HOH HOH . J 5 HOH A 57 111 111 HOH HOH . J 5 HOH A 58 115 115 HOH HOH . J 5 HOH A 59 119 119 HOH HOH . J 5 HOH A 60 122 122 HOH HOH . J 5 HOH A 61 123 123 HOH HOH . J 5 HOH A 62 125 125 HOH HOH . J 5 HOH A 63 127 127 HOH HOH . J 5 HOH A 64 128 128 HOH HOH . J 5 HOH A 65 130 130 HOH HOH . J 5 HOH A 66 131 131 HOH HOH . J 5 HOH A 67 136 136 HOH HOH . J 5 HOH A 68 138 138 HOH HOH . J 5 HOH A 69 139 139 HOH HOH . J 5 HOH A 70 140 140 HOH HOH . J 5 HOH A 71 141 141 HOH HOH . J 5 HOH A 72 142 142 HOH HOH . J 5 HOH A 73 143 143 HOH HOH . J 5 HOH A 74 147 147 HOH HOH . J 5 HOH A 75 150 150 HOH HOH . J 5 HOH A 76 151 151 HOH HOH . J 5 HOH A 77 153 153 HOH HOH . J 5 HOH A 78 154 154 HOH HOH . J 5 HOH A 79 156 156 HOH HOH . J 5 HOH A 80 158 158 HOH HOH . J 5 HOH A 81 159 159 HOH HOH . J 5 HOH A 82 161 161 HOH HOH . J 5 HOH A 83 163 163 HOH HOH . J 5 HOH A 84 164 164 HOH HOH . J 5 HOH A 85 167 167 HOH HOH . J 5 HOH A 86 168 168 HOH HOH . J 5 HOH A 87 170 170 HOH HOH . J 5 HOH A 88 172 172 HOH HOH . J 5 HOH A 89 173 173 HOH HOH . J 5 HOH A 90 174 174 HOH HOH . J 5 HOH A 91 177 177 HOH HOH . J 5 HOH A 92 179 179 HOH HOH . J 5 HOH A 93 181 181 HOH HOH . J 5 HOH A 94 183 183 HOH HOH . J 5 HOH A 95 185 185 HOH HOH . J 5 HOH A 96 186 186 HOH HOH . J 5 HOH A 97 188 188 HOH HOH . J 5 HOH A 98 189 189 HOH HOH . J 5 HOH A 99 190 190 HOH HOH . J 5 HOH A 100 192 192 HOH HOH . J 5 HOH A 101 194 194 HOH HOH . J 5 HOH A 102 199 199 HOH HOH . J 5 HOH A 103 200 200 HOH HOH . J 5 HOH A 104 201 201 HOH HOH . J 5 HOH A 105 202 202 HOH HOH . J 5 HOH A 106 203 203 HOH HOH . J 5 HOH A 107 204 204 HOH HOH . J 5 HOH A 108 205 205 HOH HOH . K 5 HOH B 1 44 44 HOH HOH . K 5 HOH B 2 96 96 HOH HOH . K 5 HOH B 3 134 134 HOH HOH . K 5 HOH B 4 135 135 HOH HOH . K 5 HOH B 5 146 146 HOH HOH . L 5 HOH D 1 1 1 HOH HOH . L 5 HOH D 2 3 3 HOH HOH . L 5 HOH D 3 5 5 HOH HOH . L 5 HOH D 4 7 7 HOH HOH . L 5 HOH D 5 8 8 HOH HOH . L 5 HOH D 6 9 9 HOH HOH . L 5 HOH D 7 13 13 HOH HOH . L 5 HOH D 8 17 17 HOH HOH . L 5 HOH D 9 18 18 HOH HOH . L 5 HOH D 10 22 22 HOH HOH . L 5 HOH D 11 25 25 HOH HOH . L 5 HOH D 12 26 26 HOH HOH . L 5 HOH D 13 28 28 HOH HOH . L 5 HOH D 14 30 30 HOH HOH . L 5 HOH D 15 31 31 HOH HOH . L 5 HOH D 16 32 32 HOH HOH . L 5 HOH D 17 35 35 HOH HOH . L 5 HOH D 18 37 37 HOH HOH . L 5 HOH D 19 38 38 HOH HOH . L 5 HOH D 20 41 41 HOH HOH . L 5 HOH D 21 43 43 HOH HOH . L 5 HOH D 22 50 50 HOH HOH . L 5 HOH D 23 51 51 HOH HOH . L 5 HOH D 24 55 55 HOH HOH . L 5 HOH D 25 57 57 HOH HOH . L 5 HOH D 26 60 60 HOH HOH . L 5 HOH D 27 62 62 HOH HOH . L 5 HOH D 28 63 63 HOH HOH . L 5 HOH D 29 64 64 HOH HOH . L 5 HOH D 30 65 65 HOH HOH . L 5 HOH D 31 67 67 HOH HOH . L 5 HOH D 32 72 72 HOH HOH . L 5 HOH D 33 73 73 HOH HOH . L 5 HOH D 34 74 74 HOH HOH . L 5 HOH D 35 76 76 HOH HOH . L 5 HOH D 36 79 79 HOH HOH . L 5 HOH D 37 81 81 HOH HOH . L 5 HOH D 38 83 83 HOH HOH . L 5 HOH D 39 84 84 HOH HOH . L 5 HOH D 40 87 87 HOH HOH . L 5 HOH D 41 88 88 HOH HOH . L 5 HOH D 42 89 89 HOH HOH . L 5 HOH D 43 91 91 HOH HOH . L 5 HOH D 44 93 93 HOH HOH . L 5 HOH D 45 94 94 HOH HOH . L 5 HOH D 46 97 97 HOH HOH . L 5 HOH D 47 103 103 HOH HOH . L 5 HOH D 48 107 107 HOH HOH . L 5 HOH D 49 109 109 HOH HOH . L 5 HOH D 50 112 112 HOH HOH . L 5 HOH D 51 113 113 HOH HOH . L 5 HOH D 52 114 114 HOH HOH . L 5 HOH D 53 116 116 HOH HOH . L 5 HOH D 54 117 117 HOH HOH . L 5 HOH D 55 118 118 HOH HOH . L 5 HOH D 56 120 120 HOH HOH . L 5 HOH D 57 124 124 HOH HOH . L 5 HOH D 58 126 126 HOH HOH . L 5 HOH D 59 129 129 HOH HOH . L 5 HOH D 60 132 132 HOH HOH . L 5 HOH D 61 133 133 HOH HOH . L 5 HOH D 62 137 137 HOH HOH . L 5 HOH D 63 144 144 HOH HOH . L 5 HOH D 64 145 145 HOH HOH . L 5 HOH D 65 148 148 HOH HOH . L 5 HOH D 66 149 149 HOH HOH . L 5 HOH D 67 152 152 HOH HOH . L 5 HOH D 68 155 155 HOH HOH . L 5 HOH D 69 157 157 HOH HOH . L 5 HOH D 70 160 160 HOH HOH . L 5 HOH D 71 162 162 HOH HOH . L 5 HOH D 72 165 165 HOH HOH . L 5 HOH D 73 166 166 HOH HOH . L 5 HOH D 74 169 169 HOH HOH . L 5 HOH D 75 171 171 HOH HOH . L 5 HOH D 76 175 175 HOH HOH . L 5 HOH D 77 176 176 HOH HOH . L 5 HOH D 78 178 178 HOH HOH . L 5 HOH D 79 180 180 HOH HOH . L 5 HOH D 80 182 182 HOH HOH . L 5 HOH D 81 184 184 HOH HOH . L 5 HOH D 82 187 187 HOH HOH . L 5 HOH D 83 191 191 HOH HOH . L 5 HOH D 84 193 193 HOH HOH . L 5 HOH D 85 195 195 HOH HOH . L 5 HOH D 86 197 197 HOH HOH . L 5 HOH D 87 198 198 HOH HOH . M 5 HOH E 1 95 95 HOH HOH . M 5 HOH E 2 99 99 HOH HOH . M 5 HOH E 3 104 104 HOH HOH . M 5 HOH E 4 121 121 HOH HOH . M 5 HOH E 5 196 196 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DEX . . . I 4 18.731 25.648 -9.841 1 53.77 ? C1 DEX 401 D 1 HETATM 2 C C2 DEX . . . I 4 19.467 25.608 -8.734 1 55.44 ? C2 DEX 401 D 1 HETATM 3 C C3 DEX . . . I 4 20.714 26.438 -8.687 1 54.92 ? C3 DEX 401 D 1 HETATM 4 C C4 DEX . . . I 4 21.129 27.17 -9.927 1 54.47 ? C4 DEX 401 D 1 HETATM 5 C C5 DEX . . . I 4 20.345 27.159 -11.003 1 52.43 ? C5 DEX 401 D 1 HETATM 6 C C6 DEX . . . I 4 20.835 27.905 -12.209 1 51.05 ? C6 DEX 401 D 1 HETATM 7 C C7 DEX . . . I 4 20.825 26.978 -13.42 1 53.25 ? C7 DEX 401 D 1 HETATM 8 C C8 DEX . . . I 4 19.52 26.202 -13.572 1 54.26 ? C8 DEX 401 D 1 HETATM 9 C C9 DEX . . . I 4 19.044 25.513 -12.292 1 54.99 ? C9 DEX 401 D 1 HETATM 10 C C10 DEX . . . I 4 19.023 26.446 -11.079 1 55.36 ? C10 DEX 401 D 1 HETATM 11 C C11 DEX . . . I 4 17.828 24.604 -12.454 1 57.7 ? C11 DEX 401 D 1 HETATM 12 C C12 DEX . . . I 4 17.79 23.782 -13.739 1 57.17 ? C12 DEX 401 D 1 HETATM 13 C C13 DEX . . . I 4 18.127 24.605 -14.981 1 56.24 ? C13 DEX 401 D 1 HETATM 14 C C14 DEX . . . I 4 19.494 25.252 -14.766 1 54.69 ? C14 DEX 401 D 1 HETATM 15 C C15 DEX . . . I 4 19.962 25.707 -16.144 1 54.56 ? C15 DEX 401 D 1 HETATM 16 C C16 DEX . . . I 4 19.357 24.671 -17.086 1 55.75 ? C16 DEX 401 D 1 HETATM 17 C C17 DEX . . . I 4 18.451 23.788 -16.231 1 56.65 ? C17 DEX 401 D 1 HETATM 18 C C18 DEX . . . I 4 17.002 25.597 -15.276 1 59.23 ? C18 DEX 401 D 1 HETATM 19 C C19 DEX . . . I 4 17.931 27.512 -11.14 1 57.74 ? C19 DEX 401 D 1 HETATM 20 C C20 DEX . . . I 4 17.225 23.29 -16.98 1 55.32 ? C20 DEX 401 D 1 HETATM 21 C C21 DEX . . . I 4 16.501 22.01 -16.593 1 54.86 ? C21 DEX 401 D 1 HETATM 22 C C22 DEX . . . I 4 20.442 23.954 -17.882 1 57.56 ? C22 DEX 401 D 1 HETATM 23 F F1 DEX . . . I 4 20.024 24.605 -12.018 1 58.66 ? F1 DEX 401 D 1 HETATM 24 O O1 DEX . . . I 4 21.375 26.515 -7.654 1 60.18 ? O1 DEX 401 D 1 HETATM 25 O O2 DEX . . . I 4 16.637 25.377 -12.444 1 58.44 ? O2 DEX 401 D 1 HETATM 26 O O3 DEX . . . I 4 19.199 22.632 -15.88 1 53.96 ? O3 DEX 401 D 1 HETATM 27 O O4 DEX . . . I 4 16.766 23.931 -17.924 1 59.24 ? O4 DEX 401 D 1 HETATM 28 O O5 DEX . . . I 4 15.148 22.063 -17.018 1 59.47 ? O5 DEX 401 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #