data_1M3H # _model_server_result.job_id kiGeR7RobUmNTLLXsBnTow _model_server_result.datetime_utc '2024-12-03 11:11:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m3h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 1M3H # _exptl.entry_id 1M3H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1M3H _cell.length_a 92.345 _cell.length_b 92.345 _cell.length_c 211.345 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M3H _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' DA 7 C DA 22 1_555 B P DDX 8 C DDX 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 B DG 1 1_555 C N3 DC 7 D DC 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 B DG 1 1_555 C O2 DC 7 D DC 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 B DG 1 1_555 C N4 DC 7 D DC 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog4 A N1 DG 2 B DG 2 1_555 C N3 DC 6 D DC 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N3 DT 3 B DT 3 1_555 C N1 DA 5 D DA 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O4 DT 3 B DT 3 1_555 C N6 DA 5 D DA 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DA 4 B DA 4 1_555 C N3 DT 4 D DT 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 DA 4 B DA 4 1_555 C O4 DT 4 D DT 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DG 5 B DG 5 1_555 C N3 DC 3 D DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 DG 5 B DG 5 1_555 C O2 DC 3 D DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 DG 5 B DG 5 1_555 C N4 DC 3 D DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DA 6 B DA 6 1_555 C N3 DT 2 D DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 DA 6 B DA 6 1_555 C O4 DT 2 D DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 7 B DC 7 1_555 C N1 DG 1 D DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 7 B DC 7 1_555 C O6 DG 1 D DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 7 B DC 7 1_555 C N2 DG 1 D DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DT 9 B DT 9 1_555 B N1 DA 7 C DA 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O4 DT 9 B DT 9 1_555 B N6 DA 7 C DA 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 DG 10 B DG 10 1_555 B N3 DC 6 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N2 DG 10 B DG 10 1_555 B O2 DC 6 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O6 DG 10 B DG 10 1_555 B N4 DC 6 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DG 11 B DG 11 1_555 B N3 DC 5 C DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N2 DG 11 B DG 11 1_555 B O2 DC 5 C DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O6 DG 11 B DG 11 1_555 B N4 DC 5 C DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N1 DA 12 B DA 12 1_555 B N3 DT 4 C DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N6 DA 12 B DA 12 1_555 B O4 DT 4 C DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N3 DC 13 B DC 13 1_555 B N1 DG 3 C DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N4 DC 13 B DC 13 1_555 B O6 DG 3 C DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O2 DC 13 B DC 13 1_555 B N2 DG 3 C DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N1 DG 14 B DG 14 1_555 B N3 DC 2 C DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A N2 DG 14 B DG 14 1_555 B O2 DC 2 C DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A O6 DG 14 B DG 14 1_555 B N4 DC 2 C DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog33 A O2 DC 15 B DC 15 1_555 B N2 DG 1 C DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1M3H _atom_sites.fract_transf_matrix[1][1] 0.010829 _atom_sites.fract_transf_matrix[1][2] 0.006252 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012504 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 CA C 1 101 101 CA CA . F 6 HOH B 1 91 91 HOH HOH . F 6 HOH B 2 92 92 HOH HOH . G 6 HOH D 1 61 61 HOH HOH . H 6 HOH A 1 326 1 HOH HOH . H 6 HOH A 2 327 2 HOH HOH . H 6 HOH A 3 328 3 HOH HOH . H 6 HOH A 4 329 4 HOH HOH . H 6 HOH A 5 330 5 HOH HOH . H 6 HOH A 6 331 6 HOH HOH . H 6 HOH A 7 332 7 HOH HOH . H 6 HOH A 8 333 8 HOH HOH . H 6 HOH A 9 334 9 HOH HOH . H 6 HOH A 10 335 10 HOH HOH . H 6 HOH A 11 336 11 HOH HOH . H 6 HOH A 12 337 12 HOH HOH . H 6 HOH A 13 338 13 HOH HOH . H 6 HOH A 14 339 14 HOH HOH . H 6 HOH A 15 340 15 HOH HOH . H 6 HOH A 16 341 16 HOH HOH . H 6 HOH A 17 342 17 HOH HOH . H 6 HOH A 18 343 18 HOH HOH . H 6 HOH A 19 344 19 HOH HOH . H 6 HOH A 20 345 20 HOH HOH . H 6 HOH A 21 346 21 HOH HOH . H 6 HOH A 22 347 22 HOH HOH . H 6 HOH A 23 348 23 HOH HOH . H 6 HOH A 24 349 24 HOH HOH . H 6 HOH A 25 350 25 HOH HOH . H 6 HOH A 26 351 26 HOH HOH . H 6 HOH A 27 352 27 HOH HOH . H 6 HOH A 28 353 28 HOH HOH . H 6 HOH A 29 354 29 HOH HOH . H 6 HOH A 30 355 30 HOH HOH . H 6 HOH A 31 356 31 HOH HOH . H 6 HOH A 32 357 32 HOH HOH . H 6 HOH A 33 358 33 HOH HOH . H 6 HOH A 34 359 34 HOH HOH . H 6 HOH A 35 360 35 HOH HOH . H 6 HOH A 36 361 36 HOH HOH . H 6 HOH A 37 362 37 HOH HOH . H 6 HOH A 38 363 38 HOH HOH . H 6 HOH A 39 364 39 HOH HOH . H 6 HOH A 40 365 40 HOH HOH . H 6 HOH A 41 366 41 HOH HOH . H 6 HOH A 42 367 42 HOH HOH . H 6 HOH A 43 368 43 HOH HOH . H 6 HOH A 44 369 44 HOH HOH . H 6 HOH A 45 370 45 HOH HOH . H 6 HOH A 46 371 46 HOH HOH . H 6 HOH A 47 372 47 HOH HOH . H 6 HOH A 48 373 48 HOH HOH . H 6 HOH A 49 374 49 HOH HOH . H 6 HOH A 50 375 50 HOH HOH . H 6 HOH A 51 376 51 HOH HOH . H 6 HOH A 52 377 52 HOH HOH . H 6 HOH A 53 378 53 HOH HOH . H 6 HOH A 54 379 54 HOH HOH . H 6 HOH A 55 380 55 HOH HOH . H 6 HOH A 56 381 56 HOH HOH . H 6 HOH A 57 382 57 HOH HOH . H 6 HOH A 58 383 58 HOH HOH . H 6 HOH A 59 384 59 HOH HOH . H 6 HOH A 60 385 60 HOH HOH . H 6 HOH A 61 386 62 HOH HOH . H 6 HOH A 62 387 63 HOH HOH . H 6 HOH A 63 388 64 HOH HOH . H 6 HOH A 64 389 65 HOH HOH . H 6 HOH A 65 390 66 HOH HOH . H 6 HOH A 66 391 67 HOH HOH . H 6 HOH A 67 392 68 HOH HOH . H 6 HOH A 68 393 69 HOH HOH . H 6 HOH A 69 394 70 HOH HOH . H 6 HOH A 70 395 71 HOH HOH . H 6 HOH A 71 396 72 HOH HOH . H 6 HOH A 72 397 73 HOH HOH . H 6 HOH A 73 398 74 HOH HOH . H 6 HOH A 74 399 75 HOH HOH . H 6 HOH A 75 400 76 HOH HOH . H 6 HOH A 76 401 77 HOH HOH . H 6 HOH A 77 402 78 HOH HOH . H 6 HOH A 78 403 79 HOH HOH . H 6 HOH A 79 404 80 HOH HOH . H 6 HOH A 80 405 81 HOH HOH . H 6 HOH A 81 406 82 HOH HOH . H 6 HOH A 82 407 83 HOH HOH . H 6 HOH A 83 408 84 HOH HOH . H 6 HOH A 84 409 85 HOH HOH . H 6 HOH A 85 410 86 HOH HOH . H 6 HOH A 86 411 87 HOH HOH . H 6 HOH A 87 412 88 HOH HOH . H 6 HOH A 88 413 89 HOH HOH . H 6 HOH A 89 414 90 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 24.789 _atom_site.Cartn_y 32.618 _atom_site.Cartn_z 40.919 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 160.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 101 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #