data_1M49
#
_model_server_result.job_id            S78rxPO5tI5YX-HnNHhdDw 
_model_server_result.datetime_utc      '2024-12-02 20:52:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1m49 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    1M49 
#
_exptl.entry_id    1M49 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              561.629 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-[2-(1-CARBAMIMIDOYL-PIPERIDIN-3-YL)-ACETYLAMINO]-3-{4-[2-(3-OXALYL-1H-INDOL-7-YL)ETHYL]-PHENYL}-PROPIONIC ACID METHYL ESTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1M49 
_cell.length_a            51.323 
_cell.length_b            58.379 
_cell.length_c            93.507 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1M49 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 58 A CYS 58 1_555 A SG CYS 105 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 B SG CYS 58 B CYS 58 1_555 B SG CYS 105 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
#
_chem_comp.formula           'C30 H35 N5 O6' 
_chem_comp.formula_weight    561.629 
_chem_comp.id                CMM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-[2-(1-CARBAMIMIDOYL-PIPERIDIN-3-YL)-ACETYLAMINO]-3-{4-[2-(3-OXALYL-1H-INDOL-7-YL)ETHYL]-PHENYL}-PROPIONIC ACID METHYL ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O13 C11 CMM doub 70 n n 
C11 O12 CMM sing 71 n n 
C11 C10 CMM sing 72 n n 
O12 H12 CMM sing 73 n n 
C10 O14 CMM doub 74 n n 
C10 C7 CMM sing 75 n n 
C7 C8 CMM doub 76 n y 
C7 C3 CMM sing 77 n y 
C8 N9 CMM sing 78 n y 
C8 H8 CMM sing 79 n n 
C3 C4 CMM sing 80 n y 
C3 C2 CMM doub 81 n y 
C4 N9 CMM sing 82 n y 
C4 C5 CMM doub 83 n y 
N9 H9 CMM sing 84 n n 
C2 C1 CMM sing 85 n y 
C2 H2 CMM sing 86 n n 
C1 C6 CMM doub 87 n y 
C1 H1 CMM sing 88 n n 
C6 C5 CMM sing 89 n y 
C6 H6 CMM sing 90 n n 
C5 C15 CMM sing 91 n n 
C15 C16 CMM sing 92 n n 
C15 H151 CMM sing 93 n n 
C15 H152 CMM sing 94 n n 
C16 C17 CMM sing 95 n n 
C16 H161 CMM sing 96 n n 
C16 H162 CMM sing 97 n n 
C17 C18 CMM sing 98 n y 
C17 C22 CMM doub 99 n y 
C18 C19 CMM doub 100 n y 
C18 H18 CMM sing 101 n n 
C19 C20 CMM sing 102 n y 
C19 H19 CMM sing 103 n n 
C22 C21 CMM sing 104 n y 
C22 H22 CMM sing 105 n n 
C21 C20 CMM doub 106 n y 
C21 H21 CMM sing 107 n n 
C20 C23 CMM sing 108 n n 
C23 C24 CMM sing 109 n n 
C23 H231 CMM sing 110 n n 
C23 H232 CMM sing 111 n n 
C24 C25 CMM sing 112 n n 
C24 N29 CMM sing 113 n n 
C24 H24 CMM sing 114 n n 
C25 O26 CMM sing 115 n n 
C25 O28 CMM doub 116 n n 
O26 C27 CMM sing 117 n n 
C27 H271 CMM sing 118 n n 
C27 H272 CMM sing 119 n n 
C27 H273 CMM sing 120 n n 
N29 C30 CMM sing 121 n n 
N29 H29 CMM sing 122 n n 
C30 O38 CMM doub 123 n n 
C30 C31 CMM sing 124 n n 
C31 C32 CMM sing 125 n n 
C31 H311 CMM sing 126 n n 
C31 H312 CMM sing 127 n n 
C32 C33 CMM sing 128 n n 
C32 C37 CMM sing 129 n n 
C32 H32 CMM sing 130 n n 
C33 N34 CMM sing 131 n n 
C33 H331 CMM sing 132 n n 
C33 H332 CMM sing 133 n n 
C37 C36 CMM sing 134 n n 
C37 H371 CMM sing 135 n n 
C37 H372 CMM sing 136 n n 
C36 C35 CMM sing 137 n n 
C36 H361 CMM sing 138 n n 
C36 H362 CMM sing 139 n n 
C35 N34 CMM sing 140 n n 
C35 H351 CMM sing 141 n n 
C35 H352 CMM sing 142 n n 
N34 C39 CMM sing 143 n n 
C39 N41 CMM doub 144 z n 
C39 N40 CMM sing 145 n n 
N41 H41 CMM sing 146 n n 
N40 H401 CMM sing 147 n n 
N40 H402 CMM sing 148 n n 
#
_atom_sites.entry_id                     1M49 
_atom_sites.fract_transf_matrix[1][1]    0.019485 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017129 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010694 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CMM A 1 201 201 CMM FRG . 
D 2 CMM B 1 202 202 CMM FRG . 
E 3 HOH A 1 202 1 HOH HOH . 
E 3 HOH A 2 203 4 HOH HOH . 
E 3 HOH A 3 204 6 HOH HOH . 
E 3 HOH A 4 205 7 HOH HOH . 
E 3 HOH A 5 206 9 HOH HOH . 
E 3 HOH A 6 207 10 HOH HOH . 
E 3 HOH A 7 208 11 HOH HOH . 
E 3 HOH A 8 209 12 HOH HOH . 
E 3 HOH A 9 210 13 HOH HOH . 
E 3 HOH A 10 211 14 HOH HOH . 
E 3 HOH A 11 212 17 HOH HOH . 
E 3 HOH A 12 213 18 HOH HOH . 
E 3 HOH A 13 214 19 HOH HOH . 
E 3 HOH A 14 215 21 HOH HOH . 
E 3 HOH A 15 216 22 HOH HOH . 
E 3 HOH A 16 217 26 HOH HOH . 
E 3 HOH A 17 218 28 HOH HOH . 
E 3 HOH A 18 219 30 HOH HOH . 
E 3 HOH A 19 220 32 HOH HOH . 
E 3 HOH A 20 221 33 HOH HOH . 
E 3 HOH A 21 222 34 HOH HOH . 
E 3 HOH A 22 223 35 HOH HOH . 
E 3 HOH A 23 224 37 HOH HOH . 
E 3 HOH A 24 225 39 HOH HOH . 
E 3 HOH A 25 226 42 HOH HOH . 
E 3 HOH A 26 227 43 HOH HOH . 
E 3 HOH A 27 228 44 HOH HOH . 
E 3 HOH A 28 229 45 HOH HOH . 
E 3 HOH A 29 230 50 HOH HOH . 
E 3 HOH A 30 231 52 HOH HOH . 
E 3 HOH A 31 232 53 HOH HOH . 
E 3 HOH A 32 233 57 HOH HOH . 
E 3 HOH A 33 234 65 HOH HOH . 
E 3 HOH A 34 235 67 HOH HOH . 
E 3 HOH A 35 236 68 HOH HOH . 
E 3 HOH A 36 237 69 HOH HOH . 
E 3 HOH A 37 238 70 HOH HOH . 
E 3 HOH A 38 239 73 HOH HOH . 
E 3 HOH A 39 240 74 HOH HOH . 
E 3 HOH A 40 241 81 HOH HOH . 
E 3 HOH A 41 242 83 HOH HOH . 
E 3 HOH A 42 243 85 HOH HOH . 
E 3 HOH A 43 244 87 HOH HOH . 
E 3 HOH A 44 245 90 HOH HOH . 
E 3 HOH A 45 246 91 HOH HOH . 
E 3 HOH A 46 247 94 HOH HOH . 
E 3 HOH A 47 248 95 HOH HOH . 
E 3 HOH A 48 249 96 HOH HOH . 
E 3 HOH A 49 250 103 HOH HOH . 
E 3 HOH A 50 251 105 HOH HOH . 
E 3 HOH A 51 252 108 HOH HOH . 
E 3 HOH A 52 253 109 HOH HOH . 
E 3 HOH A 53 254 110 HOH HOH . 
E 3 HOH A 54 255 112 HOH HOH . 
E 3 HOH A 55 256 114 HOH HOH . 
E 3 HOH A 56 257 116 HOH HOH . 
E 3 HOH A 57 258 119 HOH HOH . 
F 3 HOH B 1 203 2 HOH HOH . 
F 3 HOH B 2 204 3 HOH HOH . 
F 3 HOH B 3 205 5 HOH HOH . 
F 3 HOH B 4 206 8 HOH HOH . 
F 3 HOH B 5 207 15 HOH HOH . 
F 3 HOH B 6 208 16 HOH HOH . 
F 3 HOH B 7 209 20 HOH HOH . 
F 3 HOH B 8 210 23 HOH HOH . 
F 3 HOH B 9 211 24 HOH HOH . 
F 3 HOH B 10 212 25 HOH HOH . 
F 3 HOH B 11 213 27 HOH HOH . 
F 3 HOH B 12 214 29 HOH HOH . 
F 3 HOH B 13 215 31 HOH HOH . 
F 3 HOH B 14 216 36 HOH HOH . 
F 3 HOH B 15 217 38 HOH HOH . 
F 3 HOH B 16 218 40 HOH HOH . 
F 3 HOH B 17 219 41 HOH HOH . 
F 3 HOH B 18 220 46 HOH HOH . 
F 3 HOH B 19 221 47 HOH HOH . 
F 3 HOH B 20 222 49 HOH HOH . 
F 3 HOH B 21 223 54 HOH HOH . 
F 3 HOH B 22 224 56 HOH HOH . 
F 3 HOH B 23 225 58 HOH HOH . 
F 3 HOH B 24 226 59 HOH HOH . 
F 3 HOH B 25 227 60 HOH HOH . 
F 3 HOH B 26 228 61 HOH HOH . 
F 3 HOH B 27 229 62 HOH HOH . 
F 3 HOH B 28 230 64 HOH HOH . 
F 3 HOH B 29 231 66 HOH HOH . 
F 3 HOH B 30 232 71 HOH HOH . 
F 3 HOH B 31 233 72 HOH HOH . 
F 3 HOH B 32 234 78 HOH HOH . 
F 3 HOH B 33 235 79 HOH HOH . 
F 3 HOH B 34 236 84 HOH HOH . 
F 3 HOH B 35 237 86 HOH HOH . 
F 3 HOH B 36 238 88 HOH HOH . 
F 3 HOH B 37 239 89 HOH HOH . 
F 3 HOH B 38 240 93 HOH HOH . 
F 3 HOH B 39 241 98 HOH HOH . 
F 3 HOH B 40 242 99 HOH HOH . 
F 3 HOH B 41 243 101 HOH HOH . 
F 3 HOH B 42 244 104 HOH HOH . 
F 3 HOH B 43 245 107 HOH HOH . 
F 3 HOH B 44 246 111 HOH HOH . 
F 3 HOH B 45 247 117 HOH HOH . 
F 3 HOH B 46 248 118 HOH HOH . 
F 3 HOH B 47 249 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O13 CMM . . . C 2 -0.293 3.872 -12.808 1 55.68 ? O13 CMM 201 A 1 
HETATM 2 C C11 CMM . . . C 2 -1.217 4.427 -12.228 1 54.72 ? C11 CMM 201 A 1 
HETATM 3 O O12 CMM . . . C 2 -2.272 4.624 -12.804 1 56.93 ? O12 CMM 201 A 1 
HETATM 4 C C10 CMM . . . C 2 -1.082 4.838 -10.973 1 51.64 ? C10 CMM 201 A 1 
HETATM 5 O O14 CMM . . . C 2 -0.969 4.036 -10.06 1 53.69 ? O14 CMM 201 A 1 
HETATM 6 C C7 CMM . . . C 2 -1.04 6.299 -10.722 1 46.64 ? C7 CMM 201 A 1 
HETATM 7 C C8 CMM . . . C 2 -1.556 7.408 -11.374 1 47.15 ? C8 CMM 201 A 1 
HETATM 8 C C3 CMM . . . C 2 -0.265 6.739 -9.552 1 42.03 ? C3 CMM 201 A 1 
HETATM 9 C C4 CMM . . . C 2 -0.417 8.195 -9.622 1 40.99 ? C4 CMM 201 A 1 
HETATM 10 N N9 CMM . . . C 2 -1.169 8.523 -10.695 1 44.53 ? N9 CMM 201 A 1 
HETATM 11 C C2 CMM . . . C 2 0.48 6.158 -8.537 1 40.78 ? C2 CMM 201 A 1 
HETATM 12 C C1 CMM . . . C 2 1.087 6.966 -7.573 1 39.08 ? C1 CMM 201 A 1 
HETATM 13 C C6 CMM . . . C 2 0.98 8.358 -7.585 1 36.71 ? C6 CMM 201 A 1 
HETATM 14 C C5 CMM . . . C 2 0.249 8.989 -8.58 1 35.68 ? C5 CMM 201 A 1 
HETATM 15 C C15 CMM . . . C 2 0.071 10.44 -8.675 1 28.83 ? C15 CMM 201 A 1 
HETATM 16 C C16 CMM . . . C 2 -0.104 11.74 -8.781 1 25.35 ? C16 CMM 201 A 1 
HETATM 17 C C17 CMM . . . C 2 -0.26 13.187 -8.921 1 24.68 ? C17 CMM 201 A 1 
HETATM 18 C C18 CMM . . . C 2 -1.267 13.922 -8.31 1 26.4 ? C18 CMM 201 A 1 
HETATM 19 C C19 CMM . . . C 2 -1.302 15.292 -8.524 1 25.58 ? C19 CMM 201 A 1 
HETATM 20 C C22 CMM . . . C 2 0.696 13.799 -9.717 1 22.31 ? C22 CMM 201 A 1 
HETATM 21 C C21 CMM . . . C 2 0.663 15.165 -9.928 1 26.19 ? C21 CMM 201 A 1 
HETATM 22 C C20 CMM . . . C 2 -0.35 15.9 -9.33 1 26.05 ? C20 CMM 201 A 1 
HETATM 23 C C23 CMM . . . C 2 -0.387 17.349 -9.551 1 28.14 ? C23 CMM 201 A 1 
HETATM 24 C C24 CMM . . . C 2 0.666 18.163 -8.868 1 30.52 ? C24 CMM 201 A 1 
HETATM 25 C C25 CMM . . . C 2 0.539 19.598 -9.259 1 34.05 ? C25 CMM 201 A 1 
HETATM 26 O O26 CMM . . . C 2 -0.389 20.414 -8.516 1 37.53 ? O26 CMM 201 A 1 
HETATM 27 C C27 CMM . . . C 2 -0.426 21.828 -8.715 1 42.53 ? C27 CMM 201 A 1 
HETATM 28 O O28 CMM . . . C 2 1.192 20.092 -10.173 1 34 ? O28 CMM 201 A 1 
HETATM 29 N N29 CMM . . . C 2 0.512 17.995 -7.443 1 27.54 ? N29 CMM 201 A 1 
HETATM 30 C C30 CMM . . . C 2 1.528 18.225 -6.629 1 28.25 ? C30 CMM 201 A 1 
HETATM 31 O O38 CMM . . . C 2 2.622 18.616 -7.02 1 27.99 ? O38 CMM 201 A 1 
HETATM 32 C C31 CMM . . . C 2 1.251 17.945 -5.173 1 26.1 ? C31 CMM 201 A 1 
HETATM 33 C C32 CMM . . . C 2 1.568 19.144 -4.294 1 26.58 ? C32 CMM 201 A 1 
HETATM 34 C C33 CMM . . . C 2 1.427 18.637 -2.86 1 25.85 ? C33 CMM 201 A 1 
HETATM 35 C C37 CMM . . . C 2 0.578 20.275 -4.59 1 23.78 ? C37 CMM 201 A 1 
HETATM 36 C C36 CMM . . . C 2 0.538 21.367 -3.515 1 29.03 ? C36 CMM 201 A 1 
HETATM 37 C C35 CMM . . . C 2 0.459 20.822 -2.082 1 28.96 ? C35 CMM 201 A 1 
HETATM 38 N N34 CMM . . . C 2 1.46 19.75 -1.929 1 26.35 ? N34 CMM 201 A 1 
HETATM 39 C C39 CMM . . . C 2 2.447 19.774 -0.911 1 26.1 ? C39 CMM 201 A 1 
HETATM 40 N N41 CMM . . . C 2 2.347 20.639 0.098 1 24.44 ? N41 CMM 201 A 1 
HETATM 41 N N40 CMM . . . C 2 3.478 18.925 -0.963 1 21.21 ? N40 CMM 201 A 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           41 
#