data_1M4K
#
_model_server_result.job_id            ENSoeVKkYeEwME7APu4NIQ 
_model_server_result.datetime_utc      '2024-10-19 10:18:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1m4k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":320}' 
#
_entry.id    1M4K 
#
_exptl.entry_id    1M4K 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1M4K 
_cell.length_a            97.535 
_cell.length_b            97.535 
_cell.length_c            54.375 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1M4K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 79 A CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf2 A SG CYS 128 A CYS 128 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     1M4K 
_atom_sites.fract_transf_matrix[1][1]    0.010253 
_atom_sites.fract_transf_matrix[1][2]    0.005919 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011839 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018391 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 3018 3018 SO4 SO4 . 
C 3 EDO A 1 320 320 EDO EGL . 
D 4 HOH A 1 3019 1 HOH HOH . 
D 4 HOH A 2 3020 2 HOH HOH . 
D 4 HOH A 3 3021 3 HOH HOH . 
D 4 HOH A 4 3022 4 HOH HOH . 
D 4 HOH A 5 3023 5 HOH HOH . 
D 4 HOH A 6 3024 6 HOH HOH . 
D 4 HOH A 7 3025 7 HOH HOH . 
D 4 HOH A 8 3026 9 HOH HOH . 
D 4 HOH A 9 3027 10 HOH HOH . 
D 4 HOH A 10 3028 11 HOH HOH . 
D 4 HOH A 11 3029 12 HOH HOH . 
D 4 HOH A 12 3030 13 HOH HOH . 
D 4 HOH A 13 3031 14 HOH HOH . 
D 4 HOH A 14 3032 15 HOH HOH . 
D 4 HOH A 15 3033 16 HOH HOH . 
D 4 HOH A 16 3034 17 HOH HOH . 
D 4 HOH A 17 3035 18 HOH HOH . 
D 4 HOH A 18 3036 19 HOH HOH . 
D 4 HOH A 19 3037 20 HOH HOH . 
D 4 HOH A 20 3038 21 HOH HOH . 
D 4 HOH A 21 3039 22 HOH HOH . 
D 4 HOH A 22 3040 23 HOH HOH . 
D 4 HOH A 23 3041 24 HOH HOH . 
D 4 HOH A 24 3042 25 HOH HOH . 
D 4 HOH A 25 3043 26 HOH HOH . 
D 4 HOH A 26 3044 27 HOH HOH . 
D 4 HOH A 27 3045 28 HOH HOH . 
D 4 HOH A 28 3046 29 HOH HOH . 
D 4 HOH A 29 3047 30 HOH HOH . 
D 4 HOH A 30 3048 31 HOH HOH . 
D 4 HOH A 31 3049 32 HOH HOH . 
D 4 HOH A 32 3050 33 HOH HOH . 
D 4 HOH A 33 3051 34 HOH HOH . 
D 4 HOH A 34 3052 35 HOH HOH . 
D 4 HOH A 35 3053 36 HOH HOH . 
D 4 HOH A 36 3054 37 HOH HOH . 
D 4 HOH A 37 3055 39 HOH HOH . 
D 4 HOH A 38 3056 40 HOH HOH . 
D 4 HOH A 39 3057 41 HOH HOH . 
D 4 HOH A 40 3058 42 HOH HOH . 
D 4 HOH A 41 3059 43 HOH HOH . 
D 4 HOH A 42 3060 44 HOH HOH . 
D 4 HOH A 43 3061 45 HOH HOH . 
D 4 HOH A 44 3062 46 HOH HOH . 
D 4 HOH A 45 3063 47 HOH HOH . 
D 4 HOH A 46 3064 48 HOH HOH . 
D 4 HOH A 47 3065 49 HOH HOH . 
D 4 HOH A 48 3066 50 HOH HOH . 
D 4 HOH A 49 3067 51 HOH HOH . 
D 4 HOH A 50 3068 52 HOH HOH . 
D 4 HOH A 51 3069 53 HOH HOH . 
D 4 HOH A 52 3070 54 HOH HOH . 
D 4 HOH A 53 3071 55 HOH HOH . 
D 4 HOH A 54 3072 56 HOH HOH . 
D 4 HOH A 55 3073 57 HOH HOH . 
D 4 HOH A 56 3074 58 HOH HOH . 
D 4 HOH A 57 3075 59 HOH HOH . 
D 4 HOH A 58 3076 60 HOH HOH . 
D 4 HOH A 59 3077 62 HOH HOH . 
D 4 HOH A 60 3078 63 HOH HOH . 
D 4 HOH A 61 3079 64 HOH HOH . 
D 4 HOH A 62 3080 65 HOH HOH . 
D 4 HOH A 63 3081 66 HOH HOH . 
D 4 HOH A 64 3082 67 HOH HOH . 
D 4 HOH A 65 3083 69 HOH HOH . 
D 4 HOH A 66 3084 70 HOH HOH . 
D 4 HOH A 67 3085 71 HOH HOH . 
D 4 HOH A 68 3086 72 HOH HOH . 
D 4 HOH A 69 3087 73 HOH HOH . 
D 4 HOH A 70 3088 74 HOH HOH . 
D 4 HOH A 71 3089 75 HOH HOH . 
D 4 HOH A 72 3090 76 HOH HOH . 
D 4 HOH A 73 3091 77 HOH HOH . 
D 4 HOH A 74 3092 78 HOH HOH . 
D 4 HOH A 75 3093 79 HOH HOH . 
D 4 HOH A 76 3094 80 HOH HOH . 
D 4 HOH A 77 3095 81 HOH HOH . 
D 4 HOH A 78 3096 82 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 40.302 15.912 13.385 1 46.85 ? C1 EDO 320 A 1 
HETATM 2 O O1 EDO . . . C 3 41.077 15.692 12.205 1 43.93 ? O1 EDO 320 A 1 
HETATM 3 C C2 EDO . . . C 3 38.979 16.524 12.971 1 46.3 ? C2 EDO 320 A 1 
HETATM 4 O O2 EDO . . . C 3 38.379 15.551 12.126 1 48.71 ? O2 EDO 320 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#