data_1M52
#
_model_server_result.job_id            OZRQ0xZj0vaAVc3jSDazaA 
_model_server_result.datetime_utc      '2024-11-22 18:19:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1m52 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":120}' 
#
_entry.id    1M52 
#
_exptl.entry_id    1M52 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.349 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-(2,6-DICHLORO-PHENYL)-8-METHYL-2-(3-METHYLSULFANYL-PHENYLAMINO)-8H-PYRIDO[2,3-D]PYRIMIDIN-7-ONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1M52 
_cell.length_a            115.848 
_cell.length_b            125.708 
_cell.length_c            56.718 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1M52 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,G 1 1 
B,D,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C21 H16 Cl2 N4 O S' 
_chem_comp.formula_weight    443.349 
_chem_comp.id                P17 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-(2,6-DICHLORO-PHENYL)-8-METHYL-2-(3-METHYLSULFANYL-PHENYLAMINO)-8H-PYRIDO[2,3-D]PYRIMIDIN-7-ONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PD173955 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S2 C3 P17 sing 262 n n 
S2 C1 P17 sing 263 n n 
C3 C8 P17 doub 264 n y 
C3 C4 P17 sing 265 n y 
C8 C7 P17 sing 266 n y 
C8 H10 P17 sing 267 n n 
C7 N9 P17 sing 268 n n 
C7 C6 P17 doub 269 n y 
N9 C10 P17 sing 270 n n 
N9 H1 P17 sing 271 n n 
C10 N15 P17 doub 272 n y 
C10 N11 P17 sing 273 n y 
N15 C14 P17 sing 274 n y 
C14 N19 P17 sing 275 n y 
C14 C13 P17 doub 276 n y 
N19 C20 P17 sing 277 n n 
N19 C18 P17 sing 278 n y 
C20 H4 P17 sing 279 n n 
C20 H5 P17 sing 280 n n 
C20 H6 P17 sing 281 n n 
C18 O21 P17 doub 282 n n 
C18 C17 P17 sing 283 n y 
C17 C22 P17 sing 284 n y 
C17 C16 P17 doub 285 n y 
C22 C27 P17 sing 286 n y 
C22 C23 P17 doub 287 n y 
C27 C26 P17 doub 288 n y 
C27 CL2 P17 sing 289 n n 
CL1 C23 P17 sing 290 n n 
C26 C25 P17 sing 291 n y 
C26 H7 P17 sing 292 n n 
C25 C24 P17 doub 293 n y 
C25 H8 P17 sing 294 n n 
C24 C23 P17 sing 295 n y 
C24 H9 P17 sing 296 n n 
C16 C13 P17 sing 297 n y 
C16 H3 P17 sing 298 n n 
C13 C12 P17 sing 299 n y 
C12 N11 P17 doub 300 n y 
C12 H2 P17 sing 301 n n 
C6 C5 P17 sing 302 n y 
C6 H16 P17 sing 303 n n 
C5 C4 P17 doub 304 n y 
C5 H15 P17 sing 305 n n 
C4 H14 P17 sing 306 n n 
C1 H11 P17 sing 307 n n 
C1 H12 P17 sing 308 n n 
C1 H13 P17 sing 309 n n 
#
_atom_sites.entry_id                     1M52 
_atom_sites.fract_transf_matrix[1][1]    0.008632 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007955 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017631 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 P17 A 1 119 1 P17 P17 . 
D 3 MES B 1 117 117 MES MES . 
E 3 MES B 1 118 118 MES MES . 
F 2 P17 B 1 120 2 P17 P17 . 
G 4 HOH A 1 1 1 HOH HOH . 
G 4 HOH A 2 3 3 HOH HOH . 
G 4 HOH A 3 8 8 HOH HOH . 
G 4 HOH A 4 12 12 HOH HOH . 
G 4 HOH A 5 13 13 HOH HOH . 
G 4 HOH A 6 20 20 HOH HOH . 
G 4 HOH A 7 23 23 HOH HOH . 
G 4 HOH A 8 26 26 HOH HOH . 
G 4 HOH A 9 28 28 HOH HOH . 
G 4 HOH A 10 29 29 HOH HOH . 
G 4 HOH A 11 35 35 HOH HOH . 
G 4 HOH A 12 36 36 HOH HOH . 
G 4 HOH A 13 37 37 HOH HOH . 
G 4 HOH A 14 39 39 HOH HOH . 
G 4 HOH A 15 40 40 HOH HOH . 
G 4 HOH A 16 42 42 HOH HOH . 
G 4 HOH A 17 45 45 HOH HOH . 
G 4 HOH A 18 51 51 HOH HOH . 
G 4 HOH A 19 52 52 HOH HOH . 
G 4 HOH A 20 53 53 HOH HOH . 
G 4 HOH A 21 54 54 HOH HOH . 
G 4 HOH A 22 55 55 HOH HOH . 
G 4 HOH A 23 57 57 HOH HOH . 
G 4 HOH A 24 58 58 HOH HOH . 
G 4 HOH A 25 59 59 HOH HOH . 
G 4 HOH A 26 62 62 HOH HOH . 
G 4 HOH A 27 67 67 HOH HOH . 
G 4 HOH A 28 69 69 HOH HOH . 
G 4 HOH A 29 72 72 HOH HOH . 
G 4 HOH A 30 73 73 HOH HOH . 
G 4 HOH A 31 74 74 HOH HOH . 
G 4 HOH A 32 75 75 HOH HOH . 
G 4 HOH A 33 82 82 HOH HOH . 
G 4 HOH A 34 83 83 HOH HOH . 
G 4 HOH A 35 84 84 HOH HOH . 
G 4 HOH A 36 85 85 HOH HOH . 
G 4 HOH A 37 86 86 HOH HOH . 
G 4 HOH A 38 90 90 HOH HOH . 
G 4 HOH A 39 91 91 HOH HOH . 
G 4 HOH A 40 92 92 HOH HOH . 
G 4 HOH A 41 94 94 HOH HOH . 
G 4 HOH A 42 95 95 HOH HOH . 
G 4 HOH A 43 105 105 HOH HOH . 
G 4 HOH A 44 107 107 HOH HOH . 
G 4 HOH A 45 108 108 HOH HOH . 
G 4 HOH A 46 110 110 HOH HOH . 
G 4 HOH A 47 113 113 HOH HOH . 
H 4 HOH B 1 2 2 HOH HOH . 
H 4 HOH B 2 4 4 HOH HOH . 
H 4 HOH B 3 5 5 HOH HOH . 
H 4 HOH B 4 6 6 HOH HOH . 
H 4 HOH B 5 7 7 HOH HOH . 
H 4 HOH B 6 9 9 HOH HOH . 
H 4 HOH B 7 10 10 HOH HOH . 
H 4 HOH B 8 11 11 HOH HOH . 
H 4 HOH B 9 14 14 HOH HOH . 
H 4 HOH B 10 15 15 HOH HOH . 
H 4 HOH B 11 16 16 HOH HOH . 
H 4 HOH B 12 17 17 HOH HOH . 
H 4 HOH B 13 18 18 HOH HOH . 
H 4 HOH B 14 19 19 HOH HOH . 
H 4 HOH B 15 21 21 HOH HOH . 
H 4 HOH B 16 22 22 HOH HOH . 
H 4 HOH B 17 24 24 HOH HOH . 
H 4 HOH B 18 25 25 HOH HOH . 
H 4 HOH B 19 27 27 HOH HOH . 
H 4 HOH B 20 30 30 HOH HOH . 
H 4 HOH B 21 31 31 HOH HOH . 
H 4 HOH B 22 32 32 HOH HOH . 
H 4 HOH B 23 33 33 HOH HOH . 
H 4 HOH B 24 34 34 HOH HOH . 
H 4 HOH B 25 38 38 HOH HOH . 
H 4 HOH B 26 41 41 HOH HOH . 
H 4 HOH B 27 43 43 HOH HOH . 
H 4 HOH B 28 44 44 HOH HOH . 
H 4 HOH B 29 46 46 HOH HOH . 
H 4 HOH B 30 47 47 HOH HOH . 
H 4 HOH B 31 48 48 HOH HOH . 
H 4 HOH B 32 49 49 HOH HOH . 
H 4 HOH B 33 50 50 HOH HOH . 
H 4 HOH B 34 56 56 HOH HOH . 
H 4 HOH B 35 60 60 HOH HOH . 
H 4 HOH B 36 61 61 HOH HOH . 
H 4 HOH B 37 63 63 HOH HOH . 
H 4 HOH B 38 64 64 HOH HOH . 
H 4 HOH B 39 65 65 HOH HOH . 
H 4 HOH B 40 66 66 HOH HOH . 
H 4 HOH B 41 68 68 HOH HOH . 
H 4 HOH B 42 70 70 HOH HOH . 
H 4 HOH B 43 71 71 HOH HOH . 
H 4 HOH B 44 76 76 HOH HOH . 
H 4 HOH B 45 77 77 HOH HOH . 
H 4 HOH B 46 78 78 HOH HOH . 
H 4 HOH B 47 79 79 HOH HOH . 
H 4 HOH B 48 80 80 HOH HOH . 
H 4 HOH B 49 81 81 HOH HOH . 
H 4 HOH B 50 87 87 HOH HOH . 
H 4 HOH B 51 88 88 HOH HOH . 
H 4 HOH B 52 89 89 HOH HOH . 
H 4 HOH B 53 93 93 HOH HOH . 
H 4 HOH B 54 96 96 HOH HOH . 
H 4 HOH B 55 97 97 HOH HOH . 
H 4 HOH B 56 98 98 HOH HOH . 
H 4 HOH B 57 99 99 HOH HOH . 
H 4 HOH B 58 100 100 HOH HOH . 
H 4 HOH B 59 101 101 HOH HOH . 
H 4 HOH B 60 102 102 HOH HOH . 
H 4 HOH B 61 103 103 HOH HOH . 
H 4 HOH B 62 104 104 HOH HOH . 
H 4 HOH B 63 106 106 HOH HOH . 
H 4 HOH B 64 109 109 HOH HOH . 
H 4 HOH B 65 111 111 HOH HOH . 
H 4 HOH B 66 112 112 HOH HOH . 
H 4 HOH B 67 114 114 HOH HOH . 
H 4 HOH B 68 115 115 HOH HOH . 
H 4 HOH B 69 116 116 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S2 P17 . . . F 2 46.675 71.871 28.081 1 37.03 ? S2 P17 120 B 1 
HETATM 2 C C3 P17 . . . F 2 46.012 73.261 28.96 1 29.94 ? C3 P17 120 B 1 
HETATM 3 C C8 P17 . . . F 2 46.457 74.564 28.637 1 28.47 ? C8 P17 120 B 1 
HETATM 4 C C7 P17 . . . F 2 45.963 75.686 29.308 1 27.49 ? C7 P17 120 B 1 
HETATM 5 N N9 P17 . . . F 2 46.485 76.897 28.904 1 26.86 ? N9 P17 120 B 1 
HETATM 6 C C10 P17 . . . F 2 45.885 78.105 29.088 1 26.37 ? C10 P17 120 B 1 
HETATM 7 N N15 P17 . . . F 2 44.748 78.184 29.825 1 27.26 ? N15 P17 120 B 1 
HETATM 8 C C14 P17 . . . F 2 44.118 79.351 30.065 1 26.88 ? C14 P17 120 B 1 
HETATM 9 N N19 P17 . . . F 2 42.973 79.391 30.841 1 28.18 ? N19 P17 120 B 1 
HETATM 10 C C20 P17 . . . F 2 42.484 78.111 31.383 1 28.92 ? C20 P17 120 B 1 
HETATM 11 C C18 P17 . . . F 2 42.328 80.535 31.082 1 27.81 ? C18 P17 120 B 1 
HETATM 12 O O21 P17 . . . F 2 41.311 80.591 31.771 1 27.92 ? O21 P17 120 B 1 
HETATM 13 C C17 P17 . . . F 2 42.85 81.828 30.531 1 27.1 ? C17 P17 120 B 1 
HETATM 14 C C22 P17 . . . F 2 42.178 83.162 30.771 1 29.65 ? C22 P17 120 B 1 
HETATM 15 C C27 P17 . . . F 2 42.488 83.985 31.91 1 30.3 ? C27 P17 120 B 1 
HETATM 16 CL CL1 P17 . . . F 2 40.854 82.759 28.307 1 29.72 ? CL1 P17 120 B 1 
HETATM 17 C C26 P17 . . . F 2 41.808 85.213 32.083 1 29.23 ? C26 P17 120 B 1 
HETATM 18 C C25 P17 . . . F 2 40.815 85.629 31.151 1 31.48 ? C25 P17 120 B 1 
HETATM 19 C C24 P17 . . . F 2 40.495 84.826 30.024 1 30.27 ? C24 P17 120 B 1 
HETATM 20 C C23 P17 . . . F 2 41.187 83.612 29.803 1 29.66 ? C23 P17 120 B 1 
HETATM 21 CL CL2 P17 . . . F 2 43.685 83.506 33.1 1 32.87 ? CL2 P17 120 B 1 
HETATM 22 C C16 P17 . . . F 2 43.972 81.84 29.769 1 26 ? C16 P17 120 B 1 
HETATM 23 C C13 P17 . . . F 2 44.673 80.528 29.509 1 25.73 ? C13 P17 120 B 1 
HETATM 24 C C12 P17 . . . F 2 45.848 80.435 28.738 1 25.89 ? C12 P17 120 B 1 
HETATM 25 N N11 P17 . . . F 2 46.431 79.222 28.545 1 25.15 ? N11 P17 120 B 1 
HETATM 26 C C6 P17 . . . F 2 44.975 75.5 30.354 1 30.01 ? C6 P17 120 B 1 
HETATM 27 C C5 P17 . . . F 2 44.515 74.184 30.686 1 31.08 ? C5 P17 120 B 1 
HETATM 28 C C4 P17 . . . F 2 45.038 73.062 29.985 1 30.5 ? C4 P17 120 B 1 
HETATM 29 C C1 P17 . . . F 2 48.116 72.627 27.233 1 33.38 ? C1 P17 120 B 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           29 
#