data_1M6G # _model_server_result.job_id OUhwxalGEr4SQYGaZEE1nQ _model_server_result.datetime_utc '2024-11-04 22:59:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m6g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":25}' # _entry.id 1M6G # _exptl.entry_id 1M6G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 87.62 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'STRONTIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.04 _cell.angle_gamma 90 _cell.entry_id 1M6G _cell.length_a 64.302 _cell.length_b 25.034 _cell.length_c 36.778 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M6G _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SR SR . A SR 23 1_555 H O HOH . A HOH 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc2 C SR SR . A SR 23 1_555 I O HOH . B HOH 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc3 C SR SR . A SR 23 1_555 I O HOH . B HOH 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc4 C SR SR . A SR 23 1_555 I O HOH . B HOH 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc5 C SR SR . A SR 23 1_555 I O HOH . B HOH 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc6 C SR SR . A SR 23 1_555 I O HOH . B HOH 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc7 D SR SR . A SR 24 1_555 H O HOH . A HOH 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc8 D SR SR . A SR 24 1_555 H O HOH . A HOH 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc9 D SR SR . A SR 24 1_555 H O HOH . A HOH 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc10 D SR SR . A SR 24 1_555 H O HOH . A HOH 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc11 D SR SR . A SR 24 1_555 I O HOH . B HOH 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc12 D SR SR . A SR 24 1_555 I O HOH . B HOH 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc13 D SR SR . A SR 24 1_555 I O HOH . B HOH 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.044 ? metalc ? metalc14 E SR SR . B SR 21 1_555 I O HOH . B HOH 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc15 E SR SR . B SR 21 1_555 I O HOH . B HOH 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc16 E SR SR . B SR 21 1_555 I O HOH . B HOH 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc17 E SR SR . B SR 21 1_555 I O HOH . B HOH 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc18 E SR SR . B SR 21 1_555 I O HOH . B HOH 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc19 E SR SR . B SR 21 1_555 I O HOH . B HOH 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc20 E SR SR . B SR 21 1_555 I O HOH . B HOH 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc21 E SR SR . B SR 21 1_555 I O HOH . B HOH 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc22 F SR SR . B SR 22 1_555 I O HOH . B HOH 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc23 F SR SR . B SR 22 1_555 I O HOH . B HOH 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc24 F SR SR . B SR 22 1_555 I O HOH . B HOH 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc25 F SR SR . B SR 22 1_555 I O HOH . B HOH 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc26 F SR SR . B SR 22 1_555 I O HOH . B HOH 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc27 F SR SR . B SR 22 1_555 I O HOH . B HOH 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc28 F SR SR . B SR 22 1_555 I O HOH . B HOH 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc29 G SR SR . B SR 25 1_555 I O HOH . B HOH 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc30 G SR SR . B SR 25 1_555 I O HOH . B HOH 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc31 G SR SR . B SR 25 1_555 I O HOH . B HOH 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc32 G SR SR . B SR 25 1_555 I O HOH . B HOH 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? hydrog WATSON-CRICK hydrog1 A N3 DT 1 A DT 1 1_555 B N1 DA 10 B DA 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A O4 DT 1 A DT 1 1_555 B N6 DA 10 B DA 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N3 DC 2 A DC 2 1_555 B N1 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N4 DC 2 A DC 2 1_555 B O6 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O2 DC 2 A DC 2 1_555 B N2 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 DG 3 A DG 3 1_555 B N3 DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N2 DG 3 A DG 3 1_555 B O2 DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O6 DG 3 A DG 3 1_555 B N4 DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DG 4 A DG 4 1_555 B N3 DC 7 B DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 DG 4 A DG 4 1_555 B O2 DC 7 B DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 DG 4 A DG 4 1_555 B N4 DC 7 B DC 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DT 5 A DT 5 1_555 B N1 DA 6 B DA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O4 DT 5 A DT 5 1_555 B N6 DA 6 B DA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DA 6 A DA 6 1_555 B N3 DT 5 B DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N6 DA 6 A DA 6 1_555 B O4 DT 5 B DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Sr 2' _chem_comp.formula_weight 87.62 _chem_comp.id SR _chem_comp.mon_nstd_flag . _chem_comp.name 'STRONTIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1M6G _atom_sites.fract_transf_matrix[1][1] 0.015552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005673 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.039946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SR A 1 23 23 SR SR . D 2 SR A 1 24 24 SR SR . E 2 SR B 1 21 21 SR SR . F 2 SR B 1 22 22 SR SR . G 2 SR B 1 25 25 SR SR . H 3 HOH A 1 41 41 HOH HOH . H 3 HOH A 2 45 45 HOH HOH . H 3 HOH A 3 46 46 HOH HOH . H 3 HOH A 4 48 48 HOH HOH . H 3 HOH A 5 53 53 HOH HOH . H 3 HOH A 6 54 54 HOH HOH . H 3 HOH A 7 55 55 HOH HOH . H 3 HOH A 8 56 56 HOH HOH . H 3 HOH A 9 57 57 HOH HOH . H 3 HOH A 10 58 58 HOH HOH . H 3 HOH A 11 59 59 HOH HOH . H 3 HOH A 12 60 60 HOH HOH . H 3 HOH A 13 61 61 HOH HOH . H 3 HOH A 14 62 62 HOH HOH . H 3 HOH A 15 64 64 HOH HOH . H 3 HOH A 16 65 65 HOH HOH . H 3 HOH A 17 66 66 HOH HOH . H 3 HOH A 18 79 79 HOH HOH . H 3 HOH A 19 80 80 HOH HOH . H 3 HOH A 20 81 81 HOH HOH . H 3 HOH A 21 82 82 HOH HOH . H 3 HOH A 22 87 87 HOH HOH . H 3 HOH A 23 94 94 HOH HOH . H 3 HOH A 24 97 97 HOH HOH . H 3 HOH A 25 98 98 HOH HOH . H 3 HOH A 26 99 99 HOH HOH . H 3 HOH A 27 100 100 HOH HOH . H 3 HOH A 28 101 101 HOH HOH . H 3 HOH A 29 108 108 HOH HOH . H 3 HOH A 30 110 110 HOH HOH . H 3 HOH A 31 112 112 HOH HOH . H 3 HOH A 32 114 114 HOH HOH . H 3 HOH A 33 116 116 HOH HOH . H 3 HOH A 34 117 117 HOH HOH . H 3 HOH A 35 118 118 HOH HOH . H 3 HOH A 36 119 119 HOH HOH . H 3 HOH A 37 120 120 HOH HOH . H 3 HOH A 38 121 121 HOH HOH . H 3 HOH A 39 122 122 HOH HOH . H 3 HOH A 40 133 133 HOH HOH . H 3 HOH A 41 137 137 HOH HOH . H 3 HOH A 42 139 139 HOH HOH . H 3 HOH A 43 141 141 HOH HOH . H 3 HOH A 44 143 143 HOH HOH . H 3 HOH A 45 144 144 HOH HOH . H 3 HOH A 46 145 145 HOH HOH . H 3 HOH A 47 146 146 HOH HOH . I 3 HOH B 1 26 26 HOH HOH . I 3 HOH B 2 27 27 HOH HOH . I 3 HOH B 3 28 28 HOH HOH . I 3 HOH B 4 29 29 HOH HOH . I 3 HOH B 5 30 30 HOH HOH . I 3 HOH B 6 31 31 HOH HOH . I 3 HOH B 7 32 32 HOH HOH . I 3 HOH B 8 33 33 HOH HOH . I 3 HOH B 9 34 34 HOH HOH . I 3 HOH B 10 35 35 HOH HOH . I 3 HOH B 11 36 36 HOH HOH . I 3 HOH B 12 37 37 HOH HOH . I 3 HOH B 13 38 38 HOH HOH . I 3 HOH B 14 39 39 HOH HOH . I 3 HOH B 15 40 40 HOH HOH . I 3 HOH B 16 42 42 HOH HOH . I 3 HOH B 17 43 43 HOH HOH . I 3 HOH B 18 44 44 HOH HOH . I 3 HOH B 19 47 47 HOH HOH . I 3 HOH B 20 49 49 HOH HOH . I 3 HOH B 21 50 50 HOH HOH . I 3 HOH B 22 51 51 HOH HOH . I 3 HOH B 23 52 52 HOH HOH . I 3 HOH B 24 67 67 HOH HOH . I 3 HOH B 25 68 68 HOH HOH . I 3 HOH B 26 69 69 HOH HOH . I 3 HOH B 27 71 71 HOH HOH . I 3 HOH B 28 73 73 HOH HOH . I 3 HOH B 29 74 74 HOH HOH . I 3 HOH B 30 75 75 HOH HOH . I 3 HOH B 31 78 78 HOH HOH . I 3 HOH B 32 83 83 HOH HOH . I 3 HOH B 33 84 84 HOH HOH . I 3 HOH B 34 85 85 HOH HOH . I 3 HOH B 35 86 86 HOH HOH . I 3 HOH B 36 88 88 HOH HOH . I 3 HOH B 37 89 89 HOH HOH . I 3 HOH B 38 91 91 HOH HOH . I 3 HOH B 39 92 92 HOH HOH . I 3 HOH B 40 93 93 HOH HOH . I 3 HOH B 41 95 95 HOH HOH . I 3 HOH B 42 102 102 HOH HOH . I 3 HOH B 43 104 104 HOH HOH . I 3 HOH B 44 105 105 HOH HOH . I 3 HOH B 45 106 106 HOH HOH . I 3 HOH B 46 109 109 HOH HOH . I 3 HOH B 47 111 111 HOH HOH . I 3 HOH B 48 113 113 HOH HOH . I 3 HOH B 49 115 115 HOH HOH . I 3 HOH B 50 123 123 HOH HOH . I 3 HOH B 51 124 124 HOH HOH . I 3 HOH B 52 125 125 HOH HOH . I 3 HOH B 53 126 126 HOH HOH . I 3 HOH B 54 129 129 HOH HOH . I 3 HOH B 55 130 130 HOH HOH . I 3 HOH B 56 131 131 HOH HOH . I 3 HOH B 57 132 132 HOH HOH . I 3 HOH B 58 135 135 HOH HOH . I 3 HOH B 59 140 140 HOH HOH . I 3 HOH B 60 142 142 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol SR _atom_site.label_atom_id SR _atom_site.label_comp_id SR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -6.071 _atom_site.Cartn_y 8.754 _atom_site.Cartn_z 7.706 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id SR _atom_site.auth_comp_id SR _atom_site.auth_seq_id 25 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #