data_1M8H
#
_model_server_result.job_id            Iue3qbtd4VwkbP6W-np48g 
_model_server_result.datetime_utc      '2024-11-06 03:20:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1m8h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":906}' 
#
_entry.id    1M8H 
#
_exptl.entry_id    1M8H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              163.133 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-NITROINDAZOLE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1M8H 
_cell.length_a            213.652 
_cell.length_b            213.652 
_cell.length_c            114.521 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1M8H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA,PQS dimeric 2 author_and_software_defined_assembly 1 
PISA,PQS dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1,2 
B,G,H,I,K 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 213.652 0 57.2605 
3 'crystal symmetry operation' 9_766 -x+2,-x+y+1,-z+5/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 320.478 185.02806 190.868333 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 130 A CYS 194 1_555 D FE HEM . A HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc2 B SG CYS 130 B CYS 194 1_555 G FE HEM . B HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
#
_chem_comp.formula           'C7 H5 N3 O2' 
_chem_comp.formula_weight    163.133 
_chem_comp.id                6NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-NITROINDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6 C7 6NI doub 1 n y 
C6 C5 6NI sing 2 n y 
C6 N10 6NI sing 3 n n 
C7 C8 6NI sing 4 n y 
C7 H71 6NI sing 5 n n 
C8 C9 6NI doub 6 n y 
C8 N1 6NI sing 7 n y 
C9 C4 6NI sing 8 n y 
C9 C3 6NI sing 9 n y 
C4 C5 6NI doub 10 n y 
C4 H41 6NI sing 11 n n 
C5 H51 6NI sing 12 n n 
N1 N2 6NI sing 13 n y 
N1 HN11 6NI sing 14 n n 
N2 C3 6NI doub 15 n y 
C3 H31 6NI sing 16 n n 
N10 O11 6NI sing 17 n n 
N10 O12 6NI doub 18 n n 
#
_atom_sites.entry_id                     1M8H 
_atom_sites.fract_transf_matrix[1][1]    0.004681 
_atom_sites.fract_transf_matrix[1][2]    0.002702 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005405 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008732 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 3003 3003 SO4 SO4 . 
D 3 HEM A 1 901 901 HEM HEM . 
E 4 H4B A 1 902 902 H4B HBI . 
F 5 6NI A 1 906 906 6NI 6NI . 
G 3 HEM B 1 901 901 HEM HEM . 
H 4 H4B B 1 903 902 H4B HBI . 
I 5 6NI B 1 907 907 6NI 6NI . 
J 6 HOH A 1 1000 1000 HOH H2O . 
J 6 HOH A 2 1001 1001 HOH H2O . 
J 6 HOH A 3 1002 1002 HOH H2O . 
J 6 HOH A 4 1003 1003 HOH H2O . 
J 6 HOH A 5 1004 1004 HOH H2O . 
J 6 HOH A 6 1005 1005 HOH H2O . 
J 6 HOH A 7 1006 1006 HOH H2O . 
J 6 HOH A 8 1007 1007 HOH H2O . 
J 6 HOH A 9 1008 1008 HOH H2O . 
J 6 HOH A 10 1011 1011 HOH H2O . 
J 6 HOH A 11 1017 1017 HOH H2O . 
J 6 HOH A 12 1018 1018 HOH H2O . 
J 6 HOH A 13 1019 1019 HOH H2O . 
J 6 HOH A 14 1021 1021 HOH H2O . 
J 6 HOH A 15 1023 1023 HOH H2O . 
J 6 HOH A 16 1024 1024 HOH H2O . 
J 6 HOH A 17 1025 1025 HOH H2O . 
J 6 HOH A 18 1027 1027 HOH H2O . 
J 6 HOH A 19 1028 1028 HOH H2O . 
J 6 HOH A 20 1030 1030 HOH H2O . 
J 6 HOH A 21 1032 1032 HOH H2O . 
J 6 HOH A 22 1034 1034 HOH H2O . 
J 6 HOH A 23 1035 1035 HOH H2O . 
J 6 HOH A 24 1038 1038 HOH H2O . 
J 6 HOH A 25 1039 1039 HOH H2O . 
J 6 HOH A 26 1040 1040 HOH H2O . 
J 6 HOH A 27 1042 1042 HOH H2O . 
J 6 HOH A 28 1043 1043 HOH H2O . 
J 6 HOH A 29 1046 1046 HOH H2O . 
J 6 HOH A 30 1047 1047 HOH H2O . 
J 6 HOH A 31 1048 1048 HOH H2O . 
J 6 HOH A 32 1050 1050 HOH H2O . 
J 6 HOH A 33 1052 1052 HOH H2O . 
J 6 HOH A 34 1053 1053 HOH H2O . 
J 6 HOH A 35 1057 1057 HOH H2O . 
J 6 HOH A 36 1058 1058 HOH H2O . 
J 6 HOH A 37 1059 1059 HOH H2O . 
J 6 HOH A 38 1062 1062 HOH H2O . 
J 6 HOH A 39 1064 1064 HOH H2O . 
J 6 HOH A 40 1071 1071 HOH H2O . 
J 6 HOH A 41 1072 1072 HOH H2O . 
J 6 HOH A 42 1073 1073 HOH H2O . 
J 6 HOH A 43 1074 1074 HOH H2O . 
J 6 HOH A 44 1078 1078 HOH H2O . 
J 6 HOH A 45 1081 1081 HOH H2O . 
J 6 HOH A 46 1087 1087 HOH H2O . 
J 6 HOH A 47 1089 1089 HOH H2O . 
J 6 HOH A 48 1091 1091 HOH H2O . 
J 6 HOH A 49 1093 1093 HOH H2O . 
J 6 HOH A 50 1095 1095 HOH H2O . 
K 6 HOH B 1 1009 1009 HOH H2O . 
K 6 HOH B 2 1010 1010 HOH H2O . 
K 6 HOH B 3 1012 1012 HOH H2O . 
K 6 HOH B 4 1013 1013 HOH H2O . 
K 6 HOH B 5 1014 1014 HOH H2O . 
K 6 HOH B 6 1015 1015 HOH H2O . 
K 6 HOH B 7 1016 1016 HOH H2O . 
K 6 HOH B 8 1020 1020 HOH H2O . 
K 6 HOH B 9 1022 1022 HOH H2O . 
K 6 HOH B 10 1026 1026 HOH H2O . 
K 6 HOH B 11 1029 1029 HOH H2O . 
K 6 HOH B 12 1036 1036 HOH H2O . 
K 6 HOH B 13 1037 1037 HOH H2O . 
K 6 HOH B 14 1041 1041 HOH H2O . 
K 6 HOH B 15 1044 1044 HOH H2O . 
K 6 HOH B 16 1049 1049 HOH H2O . 
K 6 HOH B 17 1051 1051 HOH H2O . 
K 6 HOH B 18 1054 1054 HOH H2O . 
K 6 HOH B 19 1055 1055 HOH H2O . 
K 6 HOH B 20 1056 1056 HOH H2O . 
K 6 HOH B 21 1061 1061 HOH H2O . 
K 6 HOH B 22 1063 1063 HOH H2O . 
K 6 HOH B 23 1070 1070 HOH H2O . 
K 6 HOH B 24 1075 1075 HOH H2O . 
K 6 HOH B 25 1076 1076 HOH H2O . 
K 6 HOH B 26 1077 1077 HOH H2O . 
K 6 HOH B 27 1079 1079 HOH H2O . 
K 6 HOH B 28 1080 1080 HOH H2O . 
K 6 HOH B 29 1082 1082 HOH H2O . 
K 6 HOH B 30 1083 1083 HOH H2O . 
K 6 HOH B 31 1084 1084 HOH H2O . 
K 6 HOH B 32 1085 1085 HOH H2O . 
K 6 HOH B 33 1086 1086 HOH H2O . 
K 6 HOH B 34 1088 1088 HOH H2O . 
K 6 HOH B 35 1090 1090 HOH H2O . 
K 6 HOH B 36 1092 1092 HOH H2O . 
K 6 HOH B 37 1094 1094 HOH H2O . 
K 6 HOH B 38 1096 1096 HOH H2O . 
K 6 HOH B 39 1097 1097 HOH H2O . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C6 6NI . . . F 5 125.379 113.299 31.334 1 51.9 ? C6 6NI 906 A 1 
HETATM 2 C C7 6NI . . . F 5 125.495 114.514 30.622 1 50.14 ? C7 6NI 906 A 1 
HETATM 3 C C8 6NI . . . F 5 124.453 115.436 30.689 1 48.13 ? C8 6NI 906 A 1 
HETATM 4 C C9 6NI . . . F 5 123.285 115.169 31.456 1 47.99 ? C9 6NI 906 A 1 
HETATM 5 C C4 6NI . . . F 5 123.173 113.941 32.158 1 48.36 ? C4 6NI 906 A 1 
HETATM 6 C C5 6NI . . . F 5 124.222 113.009 32.096 1 49.26 ? C5 6NI 906 A 1 
HETATM 7 N N1 6NI . . . F 5 124.182 116.662 30.185 1 47.55 ? N1 6NI 906 A 1 
HETATM 8 N N2 6NI . . . F 5 123.005 117.228 30.525 1 49.33 ? N2 6NI 906 A 1 
HETATM 9 C C3 6NI . . . F 5 122.421 116.288 31.33 1 47.48 ? C3 6NI 906 A 1 
HETATM 10 N N10 6NI . . . F 5 126.42 112.417 31.283 1 56.07 ? N10 6NI 906 A 1 
HETATM 11 O O11 6NI . . . F 5 126.274 111.104 31.601 1 57.86 ? O11 6NI 906 A 1 
HETATM 12 O O12 6NI . . . F 5 127.668 112.852 30.939 1 61.03 ? O12 6NI 906 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          19 
_model_server_stats.element_count           12 
#