data_1M9I # _model_server_result.job_id co-JMIqD_R0UaBNRbGk-8g _model_server_result.datetime_utc '2024-11-21 23:44:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 1M9I # _exptl.entry_id 1M9I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1M9I _cell.length_a 67.97 _cell.length_b 67.97 _cell.length_c 204.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O MET 32 A MET 33 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc2 A O GLY 34 A GLY 35 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc3 A O GLY 36 A GLY 37 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc4 A OE1 GLU 76 A GLU 77 1_555 F CA CA . A CA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc5 A O MET 263 A MET 264 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc6 A O GLY 265 A GLY 266 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc7 A O GLY 267 A GLY 268 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? metalc ? metalc8 A OD2 ASP 307 A ASP 308 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.199 ? metalc ? metalc9 A OD1 ASP 307 A ASP 308 1_555 C CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc10 A O MET 375 A MET 376 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc11 A O GLY 377 A GLY 378 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc12 A O LEU 378 A LEU 379 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.325 ? metalc ? metalc13 A O GLY 379 A GLY 380 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc14 A OE1 GLU 419 A GLU 420 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc15 A OE2 GLU 419 A GLU 420 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.796 ? metalc ? metalc16 A O MET 447 A MET 448 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.6 ? metalc ? metalc17 A N GLY 449 A GLY 450 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.271 ? metalc ? metalc18 A O GLY 449 A GLY 450 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? metalc ? metalc19 A O GLY 451 A GLY 452 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? metalc ? metalc20 A OD1 ASP 491 A ASP 492 1_555 E CA CA . A CA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc21 A O MET 611 A MET 612 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc22 A O GLY 615 A GLY 616 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc23 A OD1 ASP 655 A ASP 656 1_555 D CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc24 D CA CA . A CA 703 1_555 G O HOH . A HOH 770 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1M9I _atom_sites.fract_transf_matrix[1][1] 0.014712 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014712 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004888 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 701 1 CA CA . C 2 CA A 1 702 2 CA CA . D 2 CA A 1 703 3 CA CA . E 2 CA A 1 704 4 CA CA . F 2 CA A 1 705 5 CA CA . G 3 HOH A 1 706 1 HOH HOH . G 3 HOH A 2 707 2 HOH HOH . G 3 HOH A 3 708 3 HOH HOH . G 3 HOH A 4 709 4 HOH HOH . G 3 HOH A 5 710 5 HOH HOH . G 3 HOH A 6 711 6 HOH HOH . G 3 HOH A 7 712 7 HOH HOH . G 3 HOH A 8 713 8 HOH HOH . G 3 HOH A 9 714 9 HOH HOH . G 3 HOH A 10 715 10 HOH HOH . G 3 HOH A 11 716 11 HOH HOH . G 3 HOH A 12 717 12 HOH HOH . G 3 HOH A 13 718 13 HOH HOH . G 3 HOH A 14 719 14 HOH HOH . G 3 HOH A 15 720 15 HOH HOH . G 3 HOH A 16 721 16 HOH HOH . G 3 HOH A 17 722 17 HOH HOH . G 3 HOH A 18 723 18 HOH HOH . G 3 HOH A 19 724 19 HOH HOH . G 3 HOH A 20 725 20 HOH HOH . G 3 HOH A 21 726 21 HOH HOH . G 3 HOH A 22 727 22 HOH HOH . G 3 HOH A 23 728 23 HOH HOH . G 3 HOH A 24 729 24 HOH HOH . G 3 HOH A 25 730 25 HOH HOH . G 3 HOH A 26 731 26 HOH HOH . G 3 HOH A 27 732 27 HOH HOH . G 3 HOH A 28 733 28 HOH HOH . G 3 HOH A 29 734 29 HOH HOH . G 3 HOH A 30 735 30 HOH HOH . G 3 HOH A 31 736 31 HOH HOH . G 3 HOH A 32 737 32 HOH HOH . G 3 HOH A 33 738 33 HOH HOH . G 3 HOH A 34 739 34 HOH HOH . G 3 HOH A 35 740 35 HOH HOH . G 3 HOH A 36 741 36 HOH HOH . G 3 HOH A 37 742 37 HOH HOH . G 3 HOH A 38 743 38 HOH HOH . G 3 HOH A 39 744 39 HOH HOH . G 3 HOH A 40 745 40 HOH HOH . G 3 HOH A 41 746 41 HOH HOH . G 3 HOH A 42 747 42 HOH HOH . G 3 HOH A 43 748 43 HOH HOH . G 3 HOH A 44 749 44 HOH HOH . G 3 HOH A 45 750 45 HOH HOH . G 3 HOH A 46 751 46 HOH HOH . G 3 HOH A 47 752 47 HOH HOH . G 3 HOH A 48 753 48 HOH HOH . G 3 HOH A 49 754 49 HOH HOH . G 3 HOH A 50 755 50 HOH HOH . G 3 HOH A 51 756 51 HOH HOH . G 3 HOH A 52 757 52 HOH HOH . G 3 HOH A 53 758 53 HOH HOH . G 3 HOH A 54 759 54 HOH HOH . G 3 HOH A 55 760 55 HOH HOH . G 3 HOH A 56 761 56 HOH HOH . G 3 HOH A 57 762 57 HOH HOH . G 3 HOH A 58 763 58 HOH HOH . G 3 HOH A 59 764 59 HOH HOH . G 3 HOH A 60 765 60 HOH HOH . G 3 HOH A 61 766 61 HOH HOH . G 3 HOH A 62 767 62 HOH HOH . G 3 HOH A 63 768 63 HOH HOH . G 3 HOH A 64 769 64 HOH HOH . G 3 HOH A 65 770 65 HOH HOH . G 3 HOH A 66 771 66 HOH HOH . G 3 HOH A 67 772 67 HOH HOH . G 3 HOH A 68 773 68 HOH HOH . G 3 HOH A 69 774 69 HOH HOH . G 3 HOH A 70 775 70 HOH HOH . G 3 HOH A 71 776 71 HOH HOH . G 3 HOH A 72 777 72 HOH HOH . G 3 HOH A 73 778 73 HOH HOH . G 3 HOH A 74 779 74 HOH HOH . G 3 HOH A 75 780 75 HOH HOH . G 3 HOH A 76 781 76 HOH HOH . G 3 HOH A 77 782 77 HOH HOH . G 3 HOH A 78 783 78 HOH HOH . G 3 HOH A 79 784 79 HOH HOH . G 3 HOH A 80 785 80 HOH HOH . G 3 HOH A 81 786 81 HOH HOH . G 3 HOH A 82 787 82 HOH HOH . G 3 HOH A 83 788 83 HOH HOH . G 3 HOH A 84 789 84 HOH HOH . G 3 HOH A 85 790 85 HOH HOH . G 3 HOH A 86 791 86 HOH HOH . G 3 HOH A 87 792 87 HOH HOH . G 3 HOH A 88 793 88 HOH HOH . G 3 HOH A 89 794 89 HOH HOH . G 3 HOH A 90 795 90 HOH HOH . G 3 HOH A 91 796 91 HOH HOH . G 3 HOH A 92 797 92 HOH HOH . G 3 HOH A 93 798 93 HOH HOH . G 3 HOH A 94 799 94 HOH HOH . G 3 HOH A 95 800 95 HOH HOH . G 3 HOH A 96 801 96 HOH HOH . G 3 HOH A 97 802 97 HOH HOH . G 3 HOH A 98 803 98 HOH HOH . G 3 HOH A 99 804 99 HOH HOH . G 3 HOH A 100 805 100 HOH HOH . G 3 HOH A 101 806 101 HOH HOH . G 3 HOH A 102 807 102 HOH HOH . G 3 HOH A 103 808 103 HOH HOH . G 3 HOH A 104 809 104 HOH HOH . G 3 HOH A 105 810 105 HOH HOH . G 3 HOH A 106 811 106 HOH HOH . G 3 HOH A 107 812 107 HOH HOH . G 3 HOH A 108 813 108 HOH HOH . G 3 HOH A 109 814 109 HOH HOH . G 3 HOH A 110 815 110 HOH HOH . G 3 HOH A 111 816 111 HOH HOH . G 3 HOH A 112 817 112 HOH HOH . G 3 HOH A 113 818 113 HOH HOH . G 3 HOH A 114 819 114 HOH HOH . G 3 HOH A 115 820 115 HOH HOH . G 3 HOH A 116 821 116 HOH HOH . G 3 HOH A 117 822 117 HOH HOH . G 3 HOH A 118 823 118 HOH HOH . G 3 HOH A 119 824 119 HOH HOH . G 3 HOH A 120 825 120 HOH HOH . G 3 HOH A 121 826 121 HOH HOH . G 3 HOH A 122 827 122 HOH HOH . G 3 HOH A 123 828 123 HOH HOH . G 3 HOH A 124 829 124 HOH HOH . G 3 HOH A 125 830 125 HOH HOH . G 3 HOH A 126 831 126 HOH HOH . G 3 HOH A 127 832 127 HOH HOH . G 3 HOH A 128 833 128 HOH HOH . G 3 HOH A 129 834 129 HOH HOH . G 3 HOH A 130 835 130 HOH HOH . G 3 HOH A 131 836 131 HOH HOH . G 3 HOH A 132 837 132 HOH HOH . G 3 HOH A 133 838 133 HOH HOH . G 3 HOH A 134 839 134 HOH HOH . G 3 HOH A 135 840 135 HOH HOH . G 3 HOH A 136 841 136 HOH HOH . G 3 HOH A 137 842 137 HOH HOH . G 3 HOH A 138 843 138 HOH HOH . G 3 HOH A 139 844 139 HOH HOH . G 3 HOH A 140 845 140 HOH HOH . G 3 HOH A 141 846 141 HOH HOH . G 3 HOH A 142 847 142 HOH HOH . G 3 HOH A 143 848 143 HOH HOH . G 3 HOH A 144 849 144 HOH HOH . G 3 HOH A 145 850 145 HOH HOH . G 3 HOH A 146 851 146 HOH HOH . G 3 HOH A 147 852 147 HOH HOH . G 3 HOH A 148 853 148 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -47.64 _atom_site.Cartn_y -45.85 _atom_site.Cartn_z -140.19 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 83.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #