data_1M9R # _model_server_result.job_id 3POaGvq4laqU81i4BoptOw _model_server_result.datetime_utc '2024-12-01 23:48:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1m9r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":904}' # _entry.id 1M9R # _exptl.entry_id 1M9R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1M9R _cell.length_a 68.625 _cell.length_b 90.28 _cell.length_c 155.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M9R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 28 A CYS 94 1_555 C ZN ZN . A ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc2 A SG CYS 33 A CYS 99 1_555 C ZN ZN . A ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc3 A SG CYS 118 A CYS 184 1_555 D FE HEM . A HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc4 C ZN ZN . A ZN 904 1_555 B SG CYS 28 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc5 C ZN ZN . A ZN 904 1_555 B SG CYS 33 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc6 B SG CYS 118 B CYS 184 1_555 G FE HEM . B HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1M9R _atom_sites.fract_transf_matrix[1][1] 0.014572 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011077 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006431 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 904 903 ZN ZN . D 3 HEM A 1 901 901 HEM HEM . E 4 INE A 1 906 906 INE 3BR . F 4 INE A 1 903 903 INE 3BR . G 3 HEM B 1 901 901 HEM HEM . H 4 INE B 1 907 907 INE 3BR . I 4 INE B 1 902 902 INE 3BR . J 5 HOH A 1 504 504 HOH H2O . J 5 HOH A 2 505 505 HOH H2O . J 5 HOH A 3 507 507 HOH H2O . J 5 HOH A 4 509 509 HOH H2O . J 5 HOH A 5 513 513 HOH H2O . J 5 HOH A 6 515 515 HOH H2O . J 5 HOH A 7 516 516 HOH H2O . J 5 HOH A 8 518 518 HOH H2O . J 5 HOH A 9 522 522 HOH H2O . J 5 HOH A 10 523 523 HOH H2O . J 5 HOH A 11 525 525 HOH H2O . J 5 HOH A 12 528 528 HOH H2O . J 5 HOH A 13 529 529 HOH H2O . J 5 HOH A 14 530 530 HOH H2O . J 5 HOH A 15 531 531 HOH H2O . J 5 HOH A 16 533 533 HOH H2O . J 5 HOH A 17 541 541 HOH H2O . J 5 HOH A 18 545 545 HOH H2O . J 5 HOH A 19 548 548 HOH H2O . J 5 HOH A 20 549 549 HOH H2O . J 5 HOH A 21 551 551 HOH H2O . J 5 HOH A 22 552 552 HOH H2O . J 5 HOH A 23 555 555 HOH H2O . J 5 HOH A 24 557 557 HOH H2O . J 5 HOH A 25 558 558 HOH H2O . J 5 HOH A 26 561 561 HOH H2O . J 5 HOH A 27 567 567 HOH H2O . J 5 HOH A 28 569 569 HOH H2O . J 5 HOH A 29 571 571 HOH H2O . J 5 HOH A 30 573 573 HOH H2O . J 5 HOH A 31 575 575 HOH H2O . J 5 HOH A 32 577 577 HOH H2O . J 5 HOH A 33 580 580 HOH H2O . J 5 HOH A 34 585 585 HOH H2O . J 5 HOH A 35 586 586 HOH H2O . J 5 HOH A 36 587 587 HOH H2O . J 5 HOH A 37 590 590 HOH H2O . J 5 HOH A 38 592 592 HOH H2O . J 5 HOH A 39 595 595 HOH H2O . J 5 HOH A 40 597 597 HOH H2O . J 5 HOH A 41 600 600 HOH H2O . J 5 HOH A 42 604 604 HOH H2O . J 5 HOH A 43 607 607 HOH H2O . J 5 HOH A 44 608 608 HOH H2O . J 5 HOH A 45 613 613 HOH H2O . J 5 HOH A 46 614 614 HOH H2O . J 5 HOH A 47 615 615 HOH H2O . J 5 HOH A 48 617 617 HOH H2O . J 5 HOH A 49 618 618 HOH H2O . J 5 HOH A 50 620 620 HOH H2O . J 5 HOH A 51 621 621 HOH H2O . J 5 HOH A 52 624 624 HOH H2O . J 5 HOH A 53 628 628 HOH H2O . J 5 HOH A 54 629 629 HOH H2O . J 5 HOH A 55 635 635 HOH H2O . J 5 HOH A 56 637 637 HOH H2O . J 5 HOH A 57 638 638 HOH H2O . J 5 HOH A 58 646 646 HOH H2O . J 5 HOH A 59 647 647 HOH H2O . J 5 HOH A 60 650 650 HOH H2O . J 5 HOH A 61 651 651 HOH H2O . J 5 HOH A 62 654 654 HOH H2O . J 5 HOH A 63 658 658 HOH H2O . J 5 HOH A 64 659 659 HOH H2O . J 5 HOH A 65 661 661 HOH H2O . J 5 HOH A 66 664 664 HOH H2O . J 5 HOH A 67 667 667 HOH H2O . J 5 HOH A 68 668 668 HOH H2O . J 5 HOH A 69 670 670 HOH H2O . J 5 HOH A 70 672 672 HOH H2O . J 5 HOH A 71 676 676 HOH H2O . J 5 HOH A 72 677 677 HOH H2O . J 5 HOH A 73 678 678 HOH H2O . J 5 HOH A 74 679 679 HOH H2O . J 5 HOH A 75 680 680 HOH H2O . J 5 HOH A 76 681 681 HOH H2O . J 5 HOH A 77 685 685 HOH H2O . J 5 HOH A 78 687 687 HOH H2O . J 5 HOH A 79 688 688 HOH H2O . J 5 HOH A 80 690 690 HOH H2O . J 5 HOH A 81 691 691 HOH H2O . J 5 HOH A 82 695 695 HOH H2O . J 5 HOH A 83 702 702 HOH H2O . J 5 HOH A 84 703 703 HOH H2O . J 5 HOH A 85 705 705 HOH H2O . J 5 HOH A 86 709 709 HOH H2O . J 5 HOH A 87 711 711 HOH H2O . J 5 HOH A 88 714 714 HOH H2O . J 5 HOH A 89 719 719 HOH H2O . J 5 HOH A 90 720 720 HOH H2O . J 5 HOH A 91 722 722 HOH H2O . J 5 HOH A 92 724 724 HOH H2O . J 5 HOH A 93 725 725 HOH H2O . J 5 HOH A 94 726 726 HOH H2O . J 5 HOH A 95 729 729 HOH H2O . K 5 HOH B 1 506 506 HOH H2O . K 5 HOH B 2 508 508 HOH H2O . K 5 HOH B 3 510 510 HOH H2O . K 5 HOH B 4 512 512 HOH H2O . K 5 HOH B 5 514 514 HOH H2O . K 5 HOH B 6 517 517 HOH H2O . K 5 HOH B 7 519 519 HOH H2O . K 5 HOH B 8 521 521 HOH H2O . K 5 HOH B 9 524 524 HOH H2O . K 5 HOH B 10 526 526 HOH H2O . K 5 HOH B 11 536 536 HOH H2O . K 5 HOH B 12 538 538 HOH H2O . K 5 HOH B 13 539 539 HOH H2O . K 5 HOH B 14 540 540 HOH H2O . K 5 HOH B 15 542 542 HOH H2O . K 5 HOH B 16 543 543 HOH H2O . K 5 HOH B 17 544 544 HOH H2O . K 5 HOH B 18 546 546 HOH H2O . K 5 HOH B 19 547 547 HOH H2O . K 5 HOH B 20 550 550 HOH H2O . K 5 HOH B 21 553 553 HOH H2O . K 5 HOH B 22 554 554 HOH H2O . K 5 HOH B 23 556 556 HOH H2O . K 5 HOH B 24 559 559 HOH H2O . K 5 HOH B 25 562 562 HOH H2O . K 5 HOH B 26 564 564 HOH H2O . K 5 HOH B 27 565 565 HOH H2O . K 5 HOH B 28 566 566 HOH H2O . K 5 HOH B 29 568 568 HOH H2O . K 5 HOH B 30 572 572 HOH H2O . K 5 HOH B 31 574 574 HOH H2O . K 5 HOH B 32 576 576 HOH H2O . K 5 HOH B 33 578 578 HOH H2O . K 5 HOH B 34 581 581 HOH H2O . K 5 HOH B 35 588 588 HOH H2O . K 5 HOH B 36 589 589 HOH H2O . K 5 HOH B 37 591 591 HOH H2O . K 5 HOH B 38 593 593 HOH H2O . K 5 HOH B 39 596 596 HOH H2O . K 5 HOH B 40 598 598 HOH H2O . K 5 HOH B 41 599 599 HOH H2O . K 5 HOH B 42 601 601 HOH H2O . K 5 HOH B 43 603 603 HOH H2O . K 5 HOH B 44 606 606 HOH H2O . K 5 HOH B 45 611 611 HOH H2O . K 5 HOH B 46 612 612 HOH H2O . K 5 HOH B 47 623 623 HOH H2O . K 5 HOH B 48 626 626 HOH H2O . K 5 HOH B 49 630 630 HOH H2O . K 5 HOH B 50 631 631 HOH H2O . K 5 HOH B 51 632 632 HOH H2O . K 5 HOH B 52 633 633 HOH H2O . K 5 HOH B 53 636 636 HOH H2O . K 5 HOH B 54 642 642 HOH H2O . K 5 HOH B 55 643 643 HOH H2O . K 5 HOH B 56 644 644 HOH H2O . K 5 HOH B 57 648 648 HOH H2O . K 5 HOH B 58 649 649 HOH H2O . K 5 HOH B 59 653 653 HOH H2O . K 5 HOH B 60 655 655 HOH H2O . K 5 HOH B 61 656 656 HOH H2O . K 5 HOH B 62 666 666 HOH H2O . K 5 HOH B 63 669 669 HOH H2O . K 5 HOH B 64 673 673 HOH H2O . K 5 HOH B 65 683 683 HOH H2O . K 5 HOH B 66 684 684 HOH H2O . K 5 HOH B 67 693 693 HOH H2O . K 5 HOH B 68 694 694 HOH H2O . K 5 HOH B 69 696 696 HOH H2O . K 5 HOH B 70 701 701 HOH H2O . K 5 HOH B 71 704 704 HOH H2O . K 5 HOH B 72 706 706 HOH H2O . K 5 HOH B 73 707 707 HOH H2O . K 5 HOH B 74 710 710 HOH H2O . K 5 HOH B 75 718 718 HOH H2O . K 5 HOH B 76 721 721 HOH H2O . K 5 HOH B 77 723 723 HOH H2O . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.328 _atom_site.Cartn_y -0.385 _atom_site.Cartn_z 41.779 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 904 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #