data_1M9R
#
_model_server_result.job_id            eadb_rkbZ9eR4j_FGlbCtA 
_model_server_result.datetime_utc      '2024-12-01 23:46:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1m9r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":906}' 
#
_entry.id    1M9R 
#
_exptl.entry_id    1M9R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              242.03 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-BROMO-7-NITROINDAZOLE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1M9R 
_cell.length_a            68.625 
_cell.length_b            90.28 
_cell.length_c            155.49 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1M9R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 H N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 28 A CYS 94 1_555 C ZN ZN . A ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc2 A SG CYS 33 A CYS 99 1_555 C ZN ZN . A ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc3 A SG CYS 118 A CYS 184 1_555 D FE HEM . A HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc4 C ZN ZN . A ZN 904 1_555 B SG CYS 28 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc5 C ZN ZN . A ZN 904 1_555 B SG CYS 33 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc6 B SG CYS 118 B CYS 184 1_555 G FE HEM . B HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
#
_chem_comp.formula           'C7 H4 Br N3 O2' 
_chem_comp.formula_weight    242.03 
_chem_comp.id                INE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-BROMO-7-NITROINDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 N2 INE sing 255 n y 
N1 C8 INE sing 256 n y 
N1 H11 INE sing 257 n n 
N2 C3 INE doub 258 n y 
C3 C9 INE sing 259 n y 
C3 BR INE sing 260 n n 
C4 C5 INE doub 261 n y 
C4 C9 INE sing 262 n y 
C4 H41 INE sing 263 n n 
C5 C6 INE sing 264 n y 
C5 H51 INE sing 265 n n 
C6 C7 INE doub 266 n y 
C6 H61 INE sing 267 n n 
C7 C8 INE sing 268 n y 
C7 N10 INE sing 269 n n 
C8 C9 INE doub 270 n y 
N10 O11 INE sing 271 n n 
N10 O12 INE doub 272 n n 
#
_atom_sites.entry_id                     1M9R 
_atom_sites.fract_transf_matrix[1][1]    0.014572 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011077 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006431 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 904 903 ZN ZN . 
D 3 HEM A 1 901 901 HEM HEM . 
E 4 INE A 1 906 906 INE 3BR . 
F 4 INE A 1 903 903 INE 3BR . 
G 3 HEM B 1 901 901 HEM HEM . 
H 4 INE B 1 907 907 INE 3BR . 
I 4 INE B 1 902 902 INE 3BR . 
J 5 HOH A 1 504 504 HOH H2O . 
J 5 HOH A 2 505 505 HOH H2O . 
J 5 HOH A 3 507 507 HOH H2O . 
J 5 HOH A 4 509 509 HOH H2O . 
J 5 HOH A 5 513 513 HOH H2O . 
J 5 HOH A 6 515 515 HOH H2O . 
J 5 HOH A 7 516 516 HOH H2O . 
J 5 HOH A 8 518 518 HOH H2O . 
J 5 HOH A 9 522 522 HOH H2O . 
J 5 HOH A 10 523 523 HOH H2O . 
J 5 HOH A 11 525 525 HOH H2O . 
J 5 HOH A 12 528 528 HOH H2O . 
J 5 HOH A 13 529 529 HOH H2O . 
J 5 HOH A 14 530 530 HOH H2O . 
J 5 HOH A 15 531 531 HOH H2O . 
J 5 HOH A 16 533 533 HOH H2O . 
J 5 HOH A 17 541 541 HOH H2O . 
J 5 HOH A 18 545 545 HOH H2O . 
J 5 HOH A 19 548 548 HOH H2O . 
J 5 HOH A 20 549 549 HOH H2O . 
J 5 HOH A 21 551 551 HOH H2O . 
J 5 HOH A 22 552 552 HOH H2O . 
J 5 HOH A 23 555 555 HOH H2O . 
J 5 HOH A 24 557 557 HOH H2O . 
J 5 HOH A 25 558 558 HOH H2O . 
J 5 HOH A 26 561 561 HOH H2O . 
J 5 HOH A 27 567 567 HOH H2O . 
J 5 HOH A 28 569 569 HOH H2O . 
J 5 HOH A 29 571 571 HOH H2O . 
J 5 HOH A 30 573 573 HOH H2O . 
J 5 HOH A 31 575 575 HOH H2O . 
J 5 HOH A 32 577 577 HOH H2O . 
J 5 HOH A 33 580 580 HOH H2O . 
J 5 HOH A 34 585 585 HOH H2O . 
J 5 HOH A 35 586 586 HOH H2O . 
J 5 HOH A 36 587 587 HOH H2O . 
J 5 HOH A 37 590 590 HOH H2O . 
J 5 HOH A 38 592 592 HOH H2O . 
J 5 HOH A 39 595 595 HOH H2O . 
J 5 HOH A 40 597 597 HOH H2O . 
J 5 HOH A 41 600 600 HOH H2O . 
J 5 HOH A 42 604 604 HOH H2O . 
J 5 HOH A 43 607 607 HOH H2O . 
J 5 HOH A 44 608 608 HOH H2O . 
J 5 HOH A 45 613 613 HOH H2O . 
J 5 HOH A 46 614 614 HOH H2O . 
J 5 HOH A 47 615 615 HOH H2O . 
J 5 HOH A 48 617 617 HOH H2O . 
J 5 HOH A 49 618 618 HOH H2O . 
J 5 HOH A 50 620 620 HOH H2O . 
J 5 HOH A 51 621 621 HOH H2O . 
J 5 HOH A 52 624 624 HOH H2O . 
J 5 HOH A 53 628 628 HOH H2O . 
J 5 HOH A 54 629 629 HOH H2O . 
J 5 HOH A 55 635 635 HOH H2O . 
J 5 HOH A 56 637 637 HOH H2O . 
J 5 HOH A 57 638 638 HOH H2O . 
J 5 HOH A 58 646 646 HOH H2O . 
J 5 HOH A 59 647 647 HOH H2O . 
J 5 HOH A 60 650 650 HOH H2O . 
J 5 HOH A 61 651 651 HOH H2O . 
J 5 HOH A 62 654 654 HOH H2O . 
J 5 HOH A 63 658 658 HOH H2O . 
J 5 HOH A 64 659 659 HOH H2O . 
J 5 HOH A 65 661 661 HOH H2O . 
J 5 HOH A 66 664 664 HOH H2O . 
J 5 HOH A 67 667 667 HOH H2O . 
J 5 HOH A 68 668 668 HOH H2O . 
J 5 HOH A 69 670 670 HOH H2O . 
J 5 HOH A 70 672 672 HOH H2O . 
J 5 HOH A 71 676 676 HOH H2O . 
J 5 HOH A 72 677 677 HOH H2O . 
J 5 HOH A 73 678 678 HOH H2O . 
J 5 HOH A 74 679 679 HOH H2O . 
J 5 HOH A 75 680 680 HOH H2O . 
J 5 HOH A 76 681 681 HOH H2O . 
J 5 HOH A 77 685 685 HOH H2O . 
J 5 HOH A 78 687 687 HOH H2O . 
J 5 HOH A 79 688 688 HOH H2O . 
J 5 HOH A 80 690 690 HOH H2O . 
J 5 HOH A 81 691 691 HOH H2O . 
J 5 HOH A 82 695 695 HOH H2O . 
J 5 HOH A 83 702 702 HOH H2O . 
J 5 HOH A 84 703 703 HOH H2O . 
J 5 HOH A 85 705 705 HOH H2O . 
J 5 HOH A 86 709 709 HOH H2O . 
J 5 HOH A 87 711 711 HOH H2O . 
J 5 HOH A 88 714 714 HOH H2O . 
J 5 HOH A 89 719 719 HOH H2O . 
J 5 HOH A 90 720 720 HOH H2O . 
J 5 HOH A 91 722 722 HOH H2O . 
J 5 HOH A 92 724 724 HOH H2O . 
J 5 HOH A 93 725 725 HOH H2O . 
J 5 HOH A 94 726 726 HOH H2O . 
J 5 HOH A 95 729 729 HOH H2O . 
K 5 HOH B 1 506 506 HOH H2O . 
K 5 HOH B 2 508 508 HOH H2O . 
K 5 HOH B 3 510 510 HOH H2O . 
K 5 HOH B 4 512 512 HOH H2O . 
K 5 HOH B 5 514 514 HOH H2O . 
K 5 HOH B 6 517 517 HOH H2O . 
K 5 HOH B 7 519 519 HOH H2O . 
K 5 HOH B 8 521 521 HOH H2O . 
K 5 HOH B 9 524 524 HOH H2O . 
K 5 HOH B 10 526 526 HOH H2O . 
K 5 HOH B 11 536 536 HOH H2O . 
K 5 HOH B 12 538 538 HOH H2O . 
K 5 HOH B 13 539 539 HOH H2O . 
K 5 HOH B 14 540 540 HOH H2O . 
K 5 HOH B 15 542 542 HOH H2O . 
K 5 HOH B 16 543 543 HOH H2O . 
K 5 HOH B 17 544 544 HOH H2O . 
K 5 HOH B 18 546 546 HOH H2O . 
K 5 HOH B 19 547 547 HOH H2O . 
K 5 HOH B 20 550 550 HOH H2O . 
K 5 HOH B 21 553 553 HOH H2O . 
K 5 HOH B 22 554 554 HOH H2O . 
K 5 HOH B 23 556 556 HOH H2O . 
K 5 HOH B 24 559 559 HOH H2O . 
K 5 HOH B 25 562 562 HOH H2O . 
K 5 HOH B 26 564 564 HOH H2O . 
K 5 HOH B 27 565 565 HOH H2O . 
K 5 HOH B 28 566 566 HOH H2O . 
K 5 HOH B 29 568 568 HOH H2O . 
K 5 HOH B 30 572 572 HOH H2O . 
K 5 HOH B 31 574 574 HOH H2O . 
K 5 HOH B 32 576 576 HOH H2O . 
K 5 HOH B 33 578 578 HOH H2O . 
K 5 HOH B 34 581 581 HOH H2O . 
K 5 HOH B 35 588 588 HOH H2O . 
K 5 HOH B 36 589 589 HOH H2O . 
K 5 HOH B 37 591 591 HOH H2O . 
K 5 HOH B 38 593 593 HOH H2O . 
K 5 HOH B 39 596 596 HOH H2O . 
K 5 HOH B 40 598 598 HOH H2O . 
K 5 HOH B 41 599 599 HOH H2O . 
K 5 HOH B 42 601 601 HOH H2O . 
K 5 HOH B 43 603 603 HOH H2O . 
K 5 HOH B 44 606 606 HOH H2O . 
K 5 HOH B 45 611 611 HOH H2O . 
K 5 HOH B 46 612 612 HOH H2O . 
K 5 HOH B 47 623 623 HOH H2O . 
K 5 HOH B 48 626 626 HOH H2O . 
K 5 HOH B 49 630 630 HOH H2O . 
K 5 HOH B 50 631 631 HOH H2O . 
K 5 HOH B 51 632 632 HOH H2O . 
K 5 HOH B 52 633 633 HOH H2O . 
K 5 HOH B 53 636 636 HOH H2O . 
K 5 HOH B 54 642 642 HOH H2O . 
K 5 HOH B 55 643 643 HOH H2O . 
K 5 HOH B 56 644 644 HOH H2O . 
K 5 HOH B 57 648 648 HOH H2O . 
K 5 HOH B 58 649 649 HOH H2O . 
K 5 HOH B 59 653 653 HOH H2O . 
K 5 HOH B 60 655 655 HOH H2O . 
K 5 HOH B 61 656 656 HOH H2O . 
K 5 HOH B 62 666 666 HOH H2O . 
K 5 HOH B 63 669 669 HOH H2O . 
K 5 HOH B 64 673 673 HOH H2O . 
K 5 HOH B 65 683 683 HOH H2O . 
K 5 HOH B 66 684 684 HOH H2O . 
K 5 HOH B 67 693 693 HOH H2O . 
K 5 HOH B 68 694 694 HOH H2O . 
K 5 HOH B 69 696 696 HOH H2O . 
K 5 HOH B 70 701 701 HOH H2O . 
K 5 HOH B 71 704 704 HOH H2O . 
K 5 HOH B 72 706 706 HOH H2O . 
K 5 HOH B 73 707 707 HOH H2O . 
K 5 HOH B 74 710 710 HOH H2O . 
K 5 HOH B 75 718 718 HOH H2O . 
K 5 HOH B 76 721 721 HOH H2O . 
K 5 HOH B 77 723 723 HOH H2O . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 INE . . . E 4 13.505 18.311 57.88 1 44.23 ? N1 INE 906 A 1 
HETATM 2 N N2 INE . . . E 4 13.431 17.673 59.079 1 45.28 ? N2 INE 906 A 1 
HETATM 3 C C3 INE . . . E 4 12.754 16.492 58.919 1 44.8 ? C3 INE 906 A 1 
HETATM 4 C C4 INE . . . E 4 11.736 15.531 56.713 1 44.97 ? C4 INE 906 A 1 
HETATM 5 C C5 INE . . . E 4 11.565 15.806 55.317 1 44.29 ? C5 INE 906 A 1 
HETATM 6 C C6 INE . . . E 4 12.073 16.98 54.752 1 45.59 ? C6 INE 906 A 1 
HETATM 7 C C7 INE . . . E 4 12.738 17.863 55.567 1 45.23 ? C7 INE 906 A 1 
HETATM 8 C C8 INE . . . E 4 12.911 17.619 56.898 1 44 ? C8 INE 906 A 1 
HETATM 9 C C9 INE . . . E 4 12.416 16.446 57.512 1 44.79 ? C9 INE 906 A 1 
HETATM 10 N N10 INE . . . E 4 13.238 19.057 54.938 1 45.87 ? N10 INE 906 A 1 
HETATM 11 O O11 INE . . . E 4 13.047 19.208 53.746 1 43.84 ? O11 INE 906 A 1 
HETATM 12 O O12 INE . . . E 4 13.819 19.824 55.676 1 47.92 ? O12 INE 906 A 1 
HETATM 13 BR BR INE . . . E 4 12.371 15.31 60.162 1 45.03 ? BR INE 906 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           231 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           13 
#