data_1MA3 # _model_server_result.job_id mvnUSRITwccENLQv233CbQ _model_server_result.datetime_utc '2025-01-10 02:21:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ma3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 1MA3 # _exptl.entry_id 1MA3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MA3 _cell.length_a 34.892 _cell.length_b 35.591 _cell.length_c 184.683 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MA3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LYS 10 B LYS 10 1_555 B N ALY 11 B ALY 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C ALY 11 B ALY 11 1_555 B N LEU 12 B LEU 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A SG CYS 126 A CYS 126 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc2 A SG CYS 129 A CYS 129 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc3 A SG CYS 150 A CYS 150 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc4 A SG CYS 153 A CYS 153 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 246 n n O1 C6 MES sing 247 n n C2 C3 MES sing 248 n n C2 H21 MES sing 249 n n C2 H22 MES sing 250 n n C3 N4 MES sing 251 n n C3 H31 MES sing 252 n n C3 H32 MES sing 253 n n N4 C5 MES sing 254 n n N4 C7 MES sing 255 n n N4 HN4 MES sing 256 n n C5 C6 MES sing 257 n n C5 H51 MES sing 258 n n C5 H52 MES sing 259 n n C6 H61 MES sing 260 n n C6 H62 MES sing 261 n n C7 C8 MES sing 262 n n C7 H71 MES sing 263 n n C7 H72 MES sing 264 n n C8 S MES sing 265 n n C8 H81 MES sing 266 n n C8 H82 MES sing 267 n n S O1S MES doub 268 n n S O2S MES doub 269 n n S O3S MES sing 270 n n # _atom_sites.entry_id 1MA3 _atom_sites.fract_transf_matrix[1][1] 0.02866 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028097 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005415 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1001 1001 ZN ZN . D 4 MES B 1 1002 1002 MES MES . E 5 HOH A 1 1002 1 HOH HOH . E 5 HOH A 2 1003 2 HOH HOH . E 5 HOH A 3 1004 3 HOH HOH . E 5 HOH A 4 1005 4 HOH HOH . E 5 HOH A 5 1006 7 HOH HOH . E 5 HOH A 6 1007 8 HOH HOH . E 5 HOH A 7 1008 9 HOH HOH . E 5 HOH A 8 1009 10 HOH HOH . E 5 HOH A 9 1010 11 HOH HOH . E 5 HOH A 10 1011 12 HOH HOH . E 5 HOH A 11 1012 13 HOH HOH . E 5 HOH A 12 1013 14 HOH HOH . E 5 HOH A 13 1014 15 HOH HOH . E 5 HOH A 14 1015 16 HOH HOH . E 5 HOH A 15 1016 17 HOH HOH . E 5 HOH A 16 1017 18 HOH HOH . E 5 HOH A 17 1018 19 HOH HOH . E 5 HOH A 18 1019 20 HOH HOH . E 5 HOH A 19 1020 21 HOH HOH . E 5 HOH A 20 1021 22 HOH HOH . E 5 HOH A 21 1022 23 HOH HOH . E 5 HOH A 22 1023 24 HOH HOH . E 5 HOH A 23 1024 25 HOH HOH . E 5 HOH A 24 1025 26 HOH HOH . E 5 HOH A 25 1026 28 HOH HOH . E 5 HOH A 26 1027 29 HOH HOH . E 5 HOH A 27 1028 30 HOH HOH . E 5 HOH A 28 1029 31 HOH HOH . E 5 HOH A 29 1030 32 HOH HOH . E 5 HOH A 30 1031 33 HOH HOH . E 5 HOH A 31 1032 34 HOH HOH . E 5 HOH A 32 1033 35 HOH HOH . E 5 HOH A 33 1034 36 HOH HOH . E 5 HOH A 34 1035 37 HOH HOH . E 5 HOH A 35 1036 38 HOH HOH . E 5 HOH A 36 1037 39 HOH HOH . E 5 HOH A 37 1038 40 HOH HOH . E 5 HOH A 38 1039 41 HOH HOH . E 5 HOH A 39 1040 42 HOH HOH . E 5 HOH A 40 1041 43 HOH HOH . E 5 HOH A 41 1042 44 HOH HOH . E 5 HOH A 42 1043 45 HOH HOH . E 5 HOH A 43 1044 46 HOH HOH . E 5 HOH A 44 1045 47 HOH HOH . E 5 HOH A 45 1046 48 HOH HOH . E 5 HOH A 46 1047 49 HOH HOH . E 5 HOH A 47 1048 50 HOH HOH . E 5 HOH A 48 1049 51 HOH HOH . E 5 HOH A 49 1050 52 HOH HOH . E 5 HOH A 50 1051 53 HOH HOH . E 5 HOH A 51 1052 54 HOH HOH . E 5 HOH A 52 1053 55 HOH HOH . E 5 HOH A 53 1054 56 HOH HOH . E 5 HOH A 54 1055 57 HOH HOH . E 5 HOH A 55 1056 58 HOH HOH . E 5 HOH A 56 1057 59 HOH HOH . E 5 HOH A 57 1058 60 HOH HOH . E 5 HOH A 58 1059 61 HOH HOH . E 5 HOH A 59 1060 62 HOH HOH . E 5 HOH A 60 1061 63 HOH HOH . E 5 HOH A 61 1062 64 HOH HOH . E 5 HOH A 62 1063 65 HOH HOH . E 5 HOH A 63 1064 66 HOH HOH . E 5 HOH A 64 1065 67 HOH HOH . E 5 HOH A 65 1066 68 HOH HOH . E 5 HOH A 66 1067 69 HOH HOH . E 5 HOH A 67 1068 70 HOH HOH . E 5 HOH A 68 1069 71 HOH HOH . E 5 HOH A 69 1070 72 HOH HOH . E 5 HOH A 70 1071 73 HOH HOH . E 5 HOH A 71 1072 76 HOH HOH . E 5 HOH A 72 1073 78 HOH HOH . E 5 HOH A 73 1074 80 HOH HOH . E 5 HOH A 74 1075 81 HOH HOH . E 5 HOH A 75 1076 82 HOH HOH . E 5 HOH A 76 1077 83 HOH HOH . E 5 HOH A 77 1078 84 HOH HOH . E 5 HOH A 78 1079 85 HOH HOH . E 5 HOH A 79 1080 86 HOH HOH . E 5 HOH A 80 1081 87 HOH HOH . E 5 HOH A 81 1082 88 HOH HOH . E 5 HOH A 82 1083 89 HOH HOH . E 5 HOH A 83 1084 90 HOH HOH . E 5 HOH A 84 1085 91 HOH HOH . E 5 HOH A 85 1086 92 HOH HOH . E 5 HOH A 86 1087 93 HOH HOH . E 5 HOH A 87 1088 94 HOH HOH . E 5 HOH A 88 1089 95 HOH HOH . E 5 HOH A 89 1090 96 HOH HOH . E 5 HOH A 90 1091 97 HOH HOH . E 5 HOH A 91 1092 98 HOH HOH . E 5 HOH A 92 1093 99 HOH HOH . E 5 HOH A 93 1094 100 HOH HOH . E 5 HOH A 94 1095 101 HOH HOH . E 5 HOH A 95 1096 102 HOH HOH . E 5 HOH A 96 1097 103 HOH HOH . E 5 HOH A 97 1098 104 HOH HOH . E 5 HOH A 98 1099 105 HOH HOH . E 5 HOH A 99 1100 106 HOH HOH . E 5 HOH A 100 1101 107 HOH HOH . E 5 HOH A 101 1102 108 HOH HOH . E 5 HOH A 102 1103 109 HOH HOH . E 5 HOH A 103 1104 110 HOH HOH . E 5 HOH A 104 1105 111 HOH HOH . E 5 HOH A 105 1106 112 HOH HOH . E 5 HOH A 106 1107 113 HOH HOH . E 5 HOH A 107 1108 114 HOH HOH . E 5 HOH A 108 1109 115 HOH HOH . E 5 HOH A 109 1110 116 HOH HOH . E 5 HOH A 110 1111 117 HOH HOH . E 5 HOH A 111 1112 118 HOH HOH . E 5 HOH A 112 1113 119 HOH HOH . E 5 HOH A 113 1114 120 HOH HOH . E 5 HOH A 114 1115 121 HOH HOH . E 5 HOH A 115 1116 122 HOH HOH . E 5 HOH A 116 1117 123 HOH HOH . E 5 HOH A 117 1118 124 HOH HOH . E 5 HOH A 118 1119 125 HOH HOH . E 5 HOH A 119 1120 126 HOH HOH . E 5 HOH A 120 1121 127 HOH HOH . E 5 HOH A 121 1122 128 HOH HOH . E 5 HOH A 122 1123 129 HOH HOH . F 5 HOH B 1 1003 5 HOH HOH . F 5 HOH B 2 1004 6 HOH HOH . F 5 HOH B 3 1005 27 HOH HOH . F 5 HOH B 4 1006 74 HOH HOH . F 5 HOH B 5 1007 75 HOH HOH . F 5 HOH B 6 1008 77 HOH HOH . F 5 HOH B 7 1009 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . D 4 0.531 6.276 84.122 1 42.18 ? O1 MES 1002 B 1 HETATM 2 C C2 MES . . . D 4 0.374 4.953 84.682 1 41.81 ? C2 MES 1002 B 1 HETATM 3 C C3 MES . . . D 4 0.505 3.907 83.551 1 41.09 ? C3 MES 1002 B 1 HETATM 4 N N4 MES . . . D 4 -0.627 4.162 82.549 1 43.33 ? N4 MES 1002 B 1 HETATM 5 C C5 MES . . . D 4 -0.556 5.605 82.02 1 41.2 ? C5 MES 1002 B 1 HETATM 6 C C6 MES . . . D 4 -0.549 6.592 83.191 1 42.48 ? C6 MES 1002 B 1 HETATM 7 C C7 MES . . . D 4 -0.626 3.171 81.374 1 43.15 ? C7 MES 1002 B 1 HETATM 8 C C8 MES . . . D 4 0.366 3.491 80.252 1 44.71 ? C8 MES 1002 B 1 HETATM 9 S S MES . . . D 4 0.237 2.262 78.965 1 44.55 ? S MES 1002 B 1 HETATM 10 O O1S MES . . . D 4 0.552 0.962 79.561 1 45.22 ? O1S MES 1002 B 1 HETATM 11 O O2S MES . . . D 4 1.202 2.64 77.93 1 46.1 ? O2S MES 1002 B 1 HETATM 12 O O3S MES . . . D 4 -1.144 2.315 78.497 1 45.1 ? O3S MES 1002 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #