data_1MB2 # _model_server_result.job_id 4R5dafoRG3V0D2PPHLkJFA _model_server_result.datetime_utc '2024-11-29 01:29:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mb2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":403}' # _entry.id 1MB2 # _exptl.entry_id 1MB2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 132.71 _cell.angle_gamma 90 _cell.entry_id 1MB2 _cell.length_a 228.73 _cell.length_b 92.24 _cell.length_c 157.59 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MB2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G,J 1 1 B,E,H,K 2 1 C,F,I,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 304 n n N H TRP sing 305 n n N H2 TRP sing 306 n n CA C TRP sing 307 n n CA CB TRP sing 308 n n CA HA TRP sing 309 n n C O TRP doub 310 n n C OXT TRP sing 311 n n CB CG TRP sing 312 n n CB HB2 TRP sing 313 n n CB HB3 TRP sing 314 n n CG CD1 TRP doub 315 n y CG CD2 TRP sing 316 n y CD1 NE1 TRP sing 317 n y CD1 HD1 TRP sing 318 n n CD2 CE2 TRP doub 319 n y CD2 CE3 TRP sing 320 n y NE1 CE2 TRP sing 321 n y NE1 HE1 TRP sing 322 n n CE2 CZ2 TRP sing 323 n y CE3 CZ3 TRP doub 324 n y CE3 HE3 TRP sing 325 n n CZ2 CH2 TRP doub 326 n y CZ2 HZ2 TRP sing 327 n n CZ3 CH2 TRP sing 328 n y CZ3 HZ3 TRP sing 329 n n CH2 HH2 TRP sing 330 n n OXT HXT TRP sing 331 n n # _atom_sites.entry_id 1MB2 _atom_sites.fract_transf_matrix[1][1] 0.004372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004036 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008636 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 TRP A 1 400 400 TRP LTR . H 2 TRP B 1 401 400 TRP LTR . I 2 TRP C 1 402 400 TRP LTR . J 2 TRP D 1 403 400 TRP LTR . K 2 TRP E 1 404 400 TRP LTR . L 2 TRP F 1 405 400 TRP LTR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . J 2 26.223 -3.842 12.701 1 45.36 ? N TRP 403 D 1 HETATM 2 C CA TRP . . . J 2 25.163 -2.957 12.21 1 44.35 ? CA TRP 403 D 1 HETATM 3 C C TRP . . . J 2 25.455 -2.555 10.691 1 45 ? C TRP 403 D 1 HETATM 4 O O TRP . . . J 2 26.716 -2.562 10.236 1 44.76 ? O TRP 403 D 1 HETATM 5 C CB TRP . . . J 2 25.293 -1.997 13.385 1 46.56 ? CB TRP 403 D 1 HETATM 6 C CG TRP . . . J 2 24.672 -0.727 13.72 1 45.31 ? CG TRP 403 D 1 HETATM 7 C CD1 TRP . . . J 2 25.313 0.149 14.49 1 44.99 ? CD1 TRP 403 D 1 HETATM 8 C CD2 TRP . . . J 2 23.397 -0.142 13.439 1 44.59 ? CD2 TRP 403 D 1 HETATM 9 N NE1 TRP . . . J 2 24.597 1.263 14.706 1 45.01 ? NE1 TRP 403 D 1 HETATM 10 C CE2 TRP . . . J 2 23.404 1.089 14.026 1 43.83 ? CE2 TRP 403 D 1 HETATM 11 C CE3 TRP . . . J 2 22.304 -0.638 12.612 1 45.01 ? CE3 TRP 403 D 1 HETATM 12 C CZ2 TRP . . . J 2 22.295 1.945 13.961 1 43.3 ? CZ2 TRP 403 D 1 HETATM 13 C CZ3 TRP . . . J 2 21.211 0.223 12.551 1 42.05 ? CZ3 TRP 403 D 1 HETATM 14 C CH2 TRP . . . J 2 21.178 1.485 13.178 1 42.04 ? CH2 TRP 403 D 1 HETATM 15 O OXT TRP . . . J 2 24.458 -2.196 9.906 1 45.9 ? OXT TRP 403 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #