data_1MBT # _model_server_result.job_id DbVfVvkDlnBWQ6iCx1QFEQ _model_server_result.datetime_utc '2024-11-25 06:31:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mbt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 1MBT # _exptl.entry_id 1MBT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MBT _cell.length_a 50.4 _cell.length_b 79.1 _cell.length_c 90.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MBT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 1MBT _atom_sites.fract_transf_matrix[1][1] 0.019841 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012642 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011013 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 600 600 SO4 SO4 . C 3 FAD A 1 401 401 FAD FAD . D 4 HOH A 1 500 500 HOH HOH . D 4 HOH A 2 501 501 HOH HOH . D 4 HOH A 3 502 502 HOH HOH . D 4 HOH A 4 503 503 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 3 6.858 35.972 18.028 1 6.27 ? PA FAD 401 A 1 HETATM 2 O O1A FAD . . . C 3 7.334 35.49 16.673 1 6.27 ? O1A FAD 401 A 1 HETATM 3 O O2A FAD . . . C 3 5.357 36.165 18.135 1 6.27 ? O2A FAD 401 A 1 HETATM 4 O O5B FAD . . . C 3 7.615 37.318 18.431 1 6.27 ? O5B FAD 401 A 1 HETATM 5 C C5B FAD . . . C 3 7.23 37.962 19.636 1 6.27 ? C5B FAD 401 A 1 HETATM 6 C C4B FAD . . . C 3 7.846 39.34 19.777 1 6.27 ? C4B FAD 401 A 1 HETATM 7 O O4B FAD . . . C 3 9.279 39.173 19.964 1 6.27 ? O4B FAD 401 A 1 HETATM 8 C C3B FAD . . . C 3 7.737 40.252 18.59 1 6.27 ? C3B FAD 401 A 1 HETATM 9 O O3B FAD . . . C 3 7.693 41.622 19.1 1 6.27 ? O3B FAD 401 A 1 HETATM 10 C C2B FAD . . . C 3 8.999 39.944 17.77 1 6.27 ? C2B FAD 401 A 1 HETATM 11 O O2B FAD . . . C 3 9.449 40.987 16.909 1 6.27 ? O2B FAD 401 A 1 HETATM 12 C C1B FAD . . . C 3 10.024 39.654 18.836 1 6.27 ? C1B FAD 401 A 1 HETATM 13 N N9A FAD . . . C 3 11.012 38.65 18.573 1 6.27 ? N9A FAD 401 A 1 HETATM 14 C C8A FAD . . . C 3 10.567 37.396 18.294 1 6.27 ? C8A FAD 401 A 1 HETATM 15 N N7A FAD . . . C 3 11.814 36.714 18.004 1 6.27 ? N7A FAD 401 A 1 HETATM 16 C C5A FAD . . . C 3 12.89 37.748 18.058 1 6.27 ? C5A FAD 401 A 1 HETATM 17 C C6A FAD . . . C 3 14.349 37.886 17.865 1 6.27 ? C6A FAD 401 A 1 HETATM 18 N N6A FAD . . . C 3 15.114 36.853 17.549 1 6.27 ? N6A FAD 401 A 1 HETATM 19 N N1A FAD . . . C 3 14.943 39.118 17.992 1 6.27 ? N1A FAD 401 A 1 HETATM 20 C C2A FAD . . . C 3 14.162 40.185 18.292 1 6.27 ? C2A FAD 401 A 1 HETATM 21 N N3A FAD . . . C 3 12.884 40.187 18.51 1 6.27 ? N3A FAD 401 A 1 HETATM 22 C C4A FAD . . . C 3 12.323 38.918 18.37 1 6.27 ? C4A FAD 401 A 1 HETATM 23 N N1 FAD . . . C 3 3.605 32.849 26.272 1 6.27 ? N1 FAD 401 A 1 HETATM 24 C C2 FAD . . . C 3 4.054 32.798 27.568 1 6.27 ? C2 FAD 401 A 1 HETATM 25 O O2 FAD . . . C 3 4.77 33.651 28.023 1 6.27 ? O2 FAD 401 A 1 HETATM 26 N N3 FAD . . . C 3 3.668 31.764 28.35 1 6.27 ? N3 FAD 401 A 1 HETATM 27 C C4 FAD . . . C 3 2.897 30.753 27.937 1 6.27 ? C4 FAD 401 A 1 HETATM 28 O O4 FAD . . . C 3 2.606 29.807 28.641 1 6.27 ? O4 FAD 401 A 1 HETATM 29 C C4X FAD . . . C 3 2.341 30.791 26.519 1 6.27 ? C4X FAD 401 A 1 HETATM 30 N N5 FAD . . . C 3 1.495 29.813 26.021 1 6.27 ? N5 FAD 401 A 1 HETATM 31 C C5X FAD . . . C 3 0.989 29.899 24.753 1 6.27 ? C5X FAD 401 A 1 HETATM 32 C C6 FAD . . . C 3 0.068 28.959 24.29 1 6.27 ? C6 FAD 401 A 1 HETATM 33 C C7 FAD . . . C 3 -0.411 29.02 22.97 1 6.27 ? C7 FAD 401 A 1 HETATM 34 C C7M FAD . . . C 3 -1.442 28.022 22.512 1 6.27 ? C7M FAD 401 A 1 HETATM 35 C C8 FAD . . . C 3 0.081 30.024 22.114 1 6.27 ? C8 FAD 401 A 1 HETATM 36 C C8M FAD . . . C 3 -0.472 29.934 20.708 1 6.27 ? C8M FAD 401 A 1 HETATM 37 C C9 FAD . . . C 3 0.978 30.954 22.609 1 6.27 ? C9 FAD 401 A 1 HETATM 38 C C9A FAD . . . C 3 1.428 30.924 23.949 1 6.27 ? C9A FAD 401 A 1 HETATM 39 N N10 FAD . . . C 3 2.305 31.908 24.461 1 6.27 ? N10 FAD 401 A 1 HETATM 40 C C10 FAD . . . C 3 2.787 31.914 25.736 1 6.27 ? C10 FAD 401 A 1 HETATM 41 C C1' FAD . . . C 3 2.778 33.064 23.656 1 6.27 ? C1' FAD 401 A 1 HETATM 42 C C2' FAD . . . C 3 4.084 32.717 22.913 1 6.27 ? C2' FAD 401 A 1 HETATM 43 O O2' FAD . . . C 3 4.316 31.333 22.765 1 6.27 ? O2' FAD 401 A 1 HETATM 44 C C3' FAD . . . C 3 5.275 33.403 23.6 1 6.27 ? C3' FAD 401 A 1 HETATM 45 O O3' FAD . . . C 3 5.026 34.764 23.894 1 6.27 ? O3' FAD 401 A 1 HETATM 46 C C4' FAD . . . C 3 6.57 33.221 22.775 1 6.27 ? C4' FAD 401 A 1 HETATM 47 O O4' FAD . . . C 3 7.696 33.827 23.387 1 6.27 ? O4' FAD 401 A 1 HETATM 48 C C5' FAD . . . C 3 6.42 33.694 21.328 1 6.27 ? C5' FAD 401 A 1 HETATM 49 O O5' FAD . . . C 3 7.08 32.752 20.483 1 6.27 ? O5' FAD 401 A 1 HETATM 50 P P FAD . . . C 3 7.478 33.343 19.117 1 6.27 ? P FAD 401 A 1 HETATM 51 O O1P FAD . . . C 3 8.931 32.964 18.883 1 6.27 ? O1P FAD 401 A 1 HETATM 52 O O2P FAD . . . C 3 6.545 32.747 18.098 1 6.27 ? O2P FAD 401 A 1 HETATM 53 O O3P FAD . . . C 3 7.326 34.978 19.133 1 6.27 ? O3P FAD 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #