data_1MDC
#
_model_server_result.job_id            MnKp3NZxc-oJydsFhmwblg 
_model_server_result.datetime_utc      '2025-08-31 17:13:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1mdc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":133}' 
#
_entry.id    1MDC 
#
_exptl.entry_id    1MDC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.5 
_cell.angle_gamma         90 
_cell.entry_id            1MDC 
_cell.length_a            27.5 
_cell.length_b            70.8 
_cell.length_c            28.5 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1MDC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            C 
_struct_conn.ptnr1_label_comp_id            ACE 
_struct_conn.ptnr1_label_seq_id             1 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             ACE 
_struct_conn.ptnr1_auth_seq_id              0 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            N 
_struct_conn.ptnr2_label_comp_id            SER 
_struct_conn.ptnr2_label_seq_id             2 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             SER 
_struct_conn.ptnr2_auth_seq_id              1 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.348 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 253 n n 
C1 O2 PLM doub 254 n n 
C1 C2 PLM sing 255 n n 
O1 H PLM sing 256 n n 
C2 C3 PLM sing 257 n n 
C2 H21 PLM sing 258 n n 
C2 H22 PLM sing 259 n n 
C3 C4 PLM sing 260 n n 
C3 H31 PLM sing 261 n n 
C3 H32 PLM sing 262 n n 
C4 C5 PLM sing 263 n n 
C4 H41 PLM sing 264 n n 
C4 H42 PLM sing 265 n n 
C5 C6 PLM sing 266 n n 
C5 H51 PLM sing 267 n n 
C5 H52 PLM sing 268 n n 
C6 C7 PLM sing 269 n n 
C6 H61 PLM sing 270 n n 
C6 H62 PLM sing 271 n n 
C7 C8 PLM sing 272 n n 
C7 H71 PLM sing 273 n n 
C7 H72 PLM sing 274 n n 
C8 C9 PLM sing 275 n n 
C8 H81 PLM sing 276 n n 
C8 H82 PLM sing 277 n n 
C9 CA PLM sing 278 n n 
C9 H91 PLM sing 279 n n 
C9 H92 PLM sing 280 n n 
CA CB PLM sing 281 n n 
CA HA1 PLM sing 282 n n 
CA HA2 PLM sing 283 n n 
CB CC PLM sing 284 n n 
CB HB1 PLM sing 285 n n 
CB HB2 PLM sing 286 n n 
CC CD PLM sing 287 n n 
CC HC1 PLM sing 288 n n 
CC HC2 PLM sing 289 n n 
CD CE PLM sing 290 n n 
CD HD1 PLM sing 291 n n 
CD HD2 PLM sing 292 n n 
CE CF PLM sing 293 n n 
CE HE1 PLM sing 294 n n 
CE HE2 PLM sing 295 n n 
CF CG PLM sing 296 n n 
CF HF1 PLM sing 297 n n 
CF HF2 PLM sing 298 n n 
CG HG1 PLM sing 299 n n 
CG HG2 PLM sing 300 n n 
CG HG3 PLM sing 301 n n 
#
_atom_sites.entry_id                     1MDC 
_atom_sites.fract_transf_matrix[1][1]    0.036364 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000317 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014124 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.035089 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 200 200 SO4 SO4 . 
C 3 PLM A 1 133 133 PLM PLM . 
D 4 HOH A 1 201 1 HOH HOH . 
D 4 HOH A 2 202 2 HOH HOH . 
D 4 HOH A 3 203 3 HOH HOH . 
D 4 HOH A 4 204 4 HOH HOH . 
D 4 HOH A 5 205 5 HOH HOH . 
D 4 HOH A 6 206 6 HOH HOH . 
D 4 HOH A 7 207 7 HOH HOH . 
D 4 HOH A 8 208 8 HOH HOH . 
D 4 HOH A 9 209 9 HOH HOH . 
D 4 HOH A 10 210 10 HOH HOH . 
D 4 HOH A 11 211 11 HOH HOH . 
D 4 HOH A 12 212 12 HOH HOH . 
D 4 HOH A 13 213 13 HOH HOH . 
D 4 HOH A 14 214 14 HOH HOH . 
D 4 HOH A 15 215 15 HOH HOH . 
D 4 HOH A 16 216 16 HOH HOH . 
D 4 HOH A 17 217 17 HOH HOH . 
D 4 HOH A 18 218 18 HOH HOH . 
D 4 HOH A 19 219 19 HOH HOH . 
D 4 HOH A 20 220 20 HOH HOH . 
D 4 HOH A 21 221 21 HOH HOH . 
D 4 HOH A 22 222 22 HOH HOH . 
D 4 HOH A 23 223 23 HOH HOH . 
D 4 HOH A 24 224 24 HOH HOH . 
D 4 HOH A 25 225 25 HOH HOH . 
D 4 HOH A 26 226 26 HOH HOH . 
D 4 HOH A 27 227 27 HOH HOH . 
D 4 HOH A 28 228 28 HOH HOH . 
D 4 HOH A 29 229 29 HOH HOH . 
D 4 HOH A 30 230 30 HOH HOH . 
D 4 HOH A 31 231 31 HOH HOH . 
D 4 HOH A 32 232 32 HOH HOH . 
D 4 HOH A 33 233 33 HOH HOH . 
D 4 HOH A 34 234 34 HOH HOH . 
D 4 HOH A 35 235 35 HOH HOH . 
D 4 HOH A 36 236 36 HOH HOH . 
D 4 HOH A 37 237 37 HOH HOH . 
D 4 HOH A 38 238 38 HOH HOH . 
D 4 HOH A 39 239 39 HOH HOH . 
D 4 HOH A 40 240 40 HOH HOH . 
D 4 HOH A 41 241 41 HOH HOH . 
D 4 HOH A 42 242 42 HOH HOH . 
D 4 HOH A 43 243 43 HOH HOH . 
D 4 HOH A 44 244 44 HOH HOH . 
D 4 HOH A 45 245 45 HOH HOH . 
D 4 HOH A 46 246 46 HOH HOH . 
D 4 HOH A 47 247 47 HOH HOH . 
D 4 HOH A 48 248 48 HOH HOH . 
D 4 HOH A 49 249 49 HOH HOH . 
D 4 HOH A 50 250 50 HOH HOH . 
D 4 HOH A 51 251 51 HOH HOH . 
D 4 HOH A 52 252 52 HOH HOH . 
D 4 HOH A 53 253 53 HOH HOH . 
D 4 HOH A 54 254 54 HOH HOH . 
D 4 HOH A 55 255 55 HOH HOH . 
D 4 HOH A 56 256 56 HOH HOH . 
D 4 HOH A 57 257 57 HOH HOH . 
D 4 HOH A 58 258 58 HOH HOH . 
D 4 HOH A 59 259 59 HOH HOH . 
D 4 HOH A 60 260 60 HOH HOH . 
D 4 HOH A 61 261 61 HOH HOH . 
D 4 HOH A 62 262 62 HOH HOH . 
D 4 HOH A 63 263 63 HOH HOH . 
D 4 HOH A 64 264 64 HOH HOH . 
D 4 HOH A 65 265 65 HOH HOH . 
D 4 HOH A 66 266 66 HOH HOH . 
D 4 HOH A 67 267 67 HOH HOH . 
D 4 HOH A 68 268 68 HOH HOH . 
D 4 HOH A 69 269 69 HOH HOH . 
D 4 HOH A 70 270 70 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . C 3 12.717 19.876 5.329 1 20.24 ? C1 PLM 133 A 1 
HETATM 2 O O1 PLM . . . C 3 12.745 21.11 5.181 1 29.75 ? O1 PLM 133 A 1 
HETATM 3 O O2 PLM . . . C 3 12.096 19.32 6.249 1 19.87 ? O2 PLM 133 A 1 
HETATM 4 C C2 PLM . . . C 3 13.532 18.948 4.4 1 54.71 ? C2 PLM 133 A 1 
HETATM 5 C C3 PLM . . . C 3 13.38 17.428 4.636 1 36.62 ? C3 PLM 133 A 1 
HETATM 6 C C4 PLM . . . C 3 14.566 16.861 5.467 1 34.5 ? C4 PLM 133 A 1 
HETATM 7 C C5 PLM . . . C 3 15.601 16.114 4.601 1 31.6 ? C5 PLM 133 A 1 
HETATM 8 C C6 PLM . . . C 3 15.55 14.593 4.827 1 30.18 ? C6 PLM 133 A 1 
HETATM 9 C C7 PLM . . . C 3 16.22 13.918 3.637 1 28.67 ? C7 PLM 133 A 1 
HETATM 10 C C8 PLM . . . C 3 16.564 12.448 3.821 1 21.37 ? C8 PLM 133 A 1 
HETATM 11 C C9 PLM . . . C 3 16.052 11.771 2.548 1 36.65 ? C9 PLM 133 A 1 
HETATM 12 C CA PLM . . . C 3 17.139 11.214 1.617 1 29.79 ? CA PLM 133 A 1 
HETATM 13 C CB PLM . . . C 3 16.974 11.807 0.209 1 43.59 ? CB PLM 133 A 1 
HETATM 14 C CC PLM . . . C 3 17.645 10.951 -0.897 1 25.74 ? CC PLM 133 A 1 
HETATM 15 C CD PLM . . . C 3 17.528 11.622 -2.304 1 22.53 ? CD PLM 133 A 1 
HETATM 16 C CE PLM . . . C 3 16.721 10.79 -3.296 1 32.01 ? CE PLM 133 A 1 
HETATM 17 C CF PLM . . . C 3 15.294 10.649 -2.767 1 29.45 ? CF PLM 133 A 1 
HETATM 18 C CG PLM . . . C 3 14.347 9.849 -3.698 1 25.04 ? CG PLM 133 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           4 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           396 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           18 
#