data_1ME7 # _model_server_result.job_id ge_b1tfj72qfjuhRB8a1tQ _model_server_result.datetime_utc '2024-11-01 10:32:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1me7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 1ME7 # _exptl.entry_id 1ME7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ME7 _cell.length_a 155.068 _cell.length_b 155.068 _cell.length_c 155.068 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ME7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 3 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 155.068 155.068 0 3 'crystal symmetry operation' 15_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 155.068 0 4 'crystal symmetry operation' 16_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 155.068 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 459 A CYS 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 C K K . A K 900 1_555 A OG SER 22 A SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc2 C K K . A K 900 1_555 A N SER 22 A SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.43 ? metalc ? metalc3 C K K . A K 900 1_555 A O GLY 20 A GLY 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc4 C K K . A K 900 1_555 A O ASN 460 A ASN 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc5 B NA NA . A NA 901 1_555 A O GLY 316 A GLY 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc6 B NA NA . A NA 901 1_555 A O GLY 314 A GLY 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc7 B NA NA . A NA 901 1_555 A O CYS 319 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc8 C K K . A K 900 1_555 A OD1 ASP 264 A ASP 264 16_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.932 ? metalc ? metalc9 C K K . A K 900 1_555 A O PHE 266 A PHE 266 16_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc10 C K K . A K 900 1_555 A OD2 ASP 264 A ASP 264 16_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc11 B NA NA . A NA 901 1_555 A O GLU 485 A GLU 485 15_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ME7 _atom_sites.fract_transf_matrix[1][1] 0.006449 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006449 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006449 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 901 901 NA NA1 . C 3 K A 1 900 900 K K . D 4 RVP A 1 602 602 RVP RMP . E 5 MOA A 1 600 600 MOA MPA . F 6 HOH A 1 902 1 HOH HOH . F 6 HOH A 2 903 2 HOH HOH . F 6 HOH A 3 904 3 HOH HOH . F 6 HOH A 4 905 4 HOH HOH . F 6 HOH A 5 906 5 HOH HOH . F 6 HOH A 6 907 6 HOH HOH . F 6 HOH A 7 908 7 HOH HOH . F 6 HOH A 8 909 8 HOH HOH . F 6 HOH A 9 910 9 HOH HOH . F 6 HOH A 10 911 10 HOH HOH . F 6 HOH A 11 912 11 HOH HOH . F 6 HOH A 12 913 12 HOH HOH . F 6 HOH A 13 914 13 HOH HOH . F 6 HOH A 14 915 14 HOH HOH . F 6 HOH A 15 916 15 HOH HOH . F 6 HOH A 16 917 16 HOH HOH . F 6 HOH A 17 918 17 HOH HOH . F 6 HOH A 18 919 18 HOH HOH . F 6 HOH A 19 920 19 HOH HOH . F 6 HOH A 20 921 20 HOH HOH . F 6 HOH A 21 922 21 HOH HOH . F 6 HOH A 22 923 22 HOH HOH . F 6 HOH A 23 924 23 HOH HOH . F 6 HOH A 24 925 24 HOH HOH . F 6 HOH A 25 926 25 HOH HOH . F 6 HOH A 26 927 26 HOH HOH . F 6 HOH A 27 928 27 HOH HOH . F 6 HOH A 28 929 28 HOH HOH . F 6 HOH A 29 930 29 HOH HOH . F 6 HOH A 30 931 30 HOH HOH . F 6 HOH A 31 932 31 HOH HOH . F 6 HOH A 32 933 32 HOH HOH . F 6 HOH A 33 934 33 HOH HOH . F 6 HOH A 34 935 34 HOH HOH . F 6 HOH A 35 936 35 HOH HOH . F 6 HOH A 36 937 36 HOH HOH . F 6 HOH A 37 938 37 HOH HOH . F 6 HOH A 38 939 38 HOH HOH . F 6 HOH A 39 940 39 HOH HOH . F 6 HOH A 40 941 40 HOH HOH . F 6 HOH A 41 942 41 HOH HOH . F 6 HOH A 42 943 42 HOH HOH . F 6 HOH A 43 944 43 HOH HOH . F 6 HOH A 44 945 44 HOH HOH . F 6 HOH A 45 946 45 HOH HOH . F 6 HOH A 46 947 46 HOH HOH . F 6 HOH A 47 948 47 HOH HOH . F 6 HOH A 48 949 48 HOH HOH . F 6 HOH A 49 950 49 HOH HOH . F 6 HOH A 50 951 50 HOH HOH . F 6 HOH A 51 952 51 HOH HOH . F 6 HOH A 52 953 52 HOH HOH . F 6 HOH A 53 954 53 HOH HOH . F 6 HOH A 54 955 54 HOH HOH . F 6 HOH A 55 956 55 HOH HOH . F 6 HOH A 56 957 56 HOH HOH . F 6 HOH A 57 958 57 HOH HOH . F 6 HOH A 58 959 58 HOH HOH . F 6 HOH A 59 960 59 HOH HOH . F 6 HOH A 60 961 60 HOH HOH . F 6 HOH A 61 962 61 HOH HOH . F 6 HOH A 62 963 62 HOH HOH . F 6 HOH A 63 964 63 HOH HOH . F 6 HOH A 64 965 64 HOH HOH . F 6 HOH A 65 966 65 HOH HOH . F 6 HOH A 66 967 66 HOH HOH . F 6 HOH A 67 968 67 HOH HOH . F 6 HOH A 68 969 68 HOH HOH . F 6 HOH A 69 970 69 HOH HOH . F 6 HOH A 70 971 70 HOH HOH . F 6 HOH A 71 972 71 HOH HOH . F 6 HOH A 72 973 72 HOH HOH . F 6 HOH A 73 974 73 HOH HOH . F 6 HOH A 74 975 74 HOH HOH . F 6 HOH A 75 976 75 HOH HOH . F 6 HOH A 76 977 76 HOH HOH . F 6 HOH A 77 978 77 HOH HOH . F 6 HOH A 78 979 78 HOH HOH . F 6 HOH A 79 980 79 HOH HOH . F 6 HOH A 80 981 80 HOH HOH . F 6 HOH A 81 982 81 HOH HOH . F 6 HOH A 82 983 82 HOH HOH . F 6 HOH A 83 984 83 HOH HOH . F 6 HOH A 84 985 84 HOH HOH . F 6 HOH A 85 986 85 HOH HOH . F 6 HOH A 86 987 86 HOH HOH . F 6 HOH A 87 988 87 HOH HOH . F 6 HOH A 88 989 88 HOH HOH . F 6 HOH A 89 990 89 HOH HOH . F 6 HOH A 90 991 90 HOH HOH . F 6 HOH A 91 992 91 HOH HOH . F 6 HOH A 92 993 92 HOH HOH . F 6 HOH A 93 994 93 HOH HOH . F 6 HOH A 94 995 94 HOH HOH . F 6 HOH A 95 996 95 HOH HOH . F 6 HOH A 96 997 96 HOH HOH . F 6 HOH A 97 998 97 HOH HOH . F 6 HOH A 98 999 98 HOH HOH . F 6 HOH A 99 1000 99 HOH HOH . F 6 HOH A 100 1001 100 HOH HOH . F 6 HOH A 101 1002 101 HOH HOH . F 6 HOH A 102 1003 102 HOH HOH . F 6 HOH A 103 1004 103 HOH HOH . F 6 HOH A 104 1005 104 HOH HOH . F 6 HOH A 105 1006 105 HOH HOH . F 6 HOH A 106 1007 106 HOH HOH . F 6 HOH A 107 1008 107 HOH HOH . F 6 HOH A 108 1009 108 HOH HOH . F 6 HOH A 109 1010 109 HOH HOH . F 6 HOH A 110 1011 110 HOH HOH . F 6 HOH A 111 1012 111 HOH HOH . F 6 HOH A 112 1013 112 HOH HOH . F 6 HOH A 113 1014 113 HOH HOH . F 6 HOH A 114 1015 114 HOH HOH . F 6 HOH A 115 1016 115 HOH HOH . F 6 HOH A 116 1017 116 HOH HOH . F 6 HOH A 117 1018 117 HOH HOH . F 6 HOH A 118 1019 118 HOH HOH . F 6 HOH A 119 1020 119 HOH HOH . F 6 HOH A 120 1021 120 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 65.965 _atom_site.Cartn_y 62.918 _atom_site.Cartn_z 15.945 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 69.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 901 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #