data_1ME9
#
_model_server_result.job_id            8qgJoVBR-XWclzE9jrvAaQ 
_model_server_result.datetime_utc      '2024-11-22 09:07:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1me9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    1ME9 
#
_exptl.entry_id    1ME9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              348.206 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'INOSINIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ME9 
_cell.length_a            154.412 
_cell.length_b            154.412 
_cell.length_c            154.412 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ME9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        207 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 4 3 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 154.412 154.412 0 
3 'crystal symmetry operation' 15_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 154.412 0 
4 'crystal symmetry operation' 16_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 154.412 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 459 A CYS 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
covale ? covale1 A C ILE 318 A ILE 318 1_555 A N CSO 319 A CSO 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C CSO 319 A CSO 319 1_555 A N ILE 320 A ILE 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
metalc ? metalc1 A O GLY 20 A GLY 20 15_565 B K K . A K 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc2 A N SER 22 A SER 22 15_565 B K K . A K 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.485 ? 
metalc ? metalc3 A OG SER 22 A SER 22 15_565 B K K . A K 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? 
metalc ? metalc4 A OD1 ASP 264 A ASP 264 1_555 B K K . A K 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? 
metalc ? metalc5 A OD2 ASP 264 A ASP 264 1_555 B K K . A K 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? 
metalc ? metalc6 A O PHE 266 A PHE 266 1_555 B K K . A K 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? 
metalc ? metalc7 A O ASN 460 A ASN 460 15_565 B K K . A K 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? 
metalc ? metalc8 B K K . A K 900 1_555 D O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? 
#
_chem_comp.formula           'C10 H13 N4 O8 P' 
_chem_comp.formula_weight    348.206 
_chem_comp.id                IMP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'INOSINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P IMP doub 187 n n 
P O2P IMP sing 188 n n 
P O3P IMP sing 189 n n 
P O5' IMP sing 190 n n 
O2P HOP2 IMP sing 191 n n 
O3P HOP3 IMP sing 192 n n 
O5' C5' IMP sing 193 n n 
C5' C4' IMP sing 194 n n 
C5' "H5'1" IMP sing 195 n n 
C5' "H5'2" IMP sing 196 n n 
C4' O4' IMP sing 197 n n 
C4' C3' IMP sing 198 n n 
C4' H4' IMP sing 199 n n 
O4' C1' IMP sing 200 n n 
C3' O3' IMP sing 201 n n 
C3' C2' IMP sing 202 n n 
C3' H3' IMP sing 203 n n 
O3' HO3' IMP sing 204 n n 
C2' O2' IMP sing 205 n n 
C2' C1' IMP sing 206 n n 
C2' H2' IMP sing 207 n n 
O2' HO2' IMP sing 208 n n 
C1' N9 IMP sing 209 n n 
C1' H1' IMP sing 210 n n 
N9 C8 IMP sing 211 n y 
N9 C4 IMP sing 212 n y 
C8 N7 IMP doub 213 n y 
C8 H8 IMP sing 214 n n 
N7 C5 IMP sing 215 n y 
C5 C6 IMP sing 216 n n 
C5 C4 IMP doub 217 n y 
C6 O6 IMP doub 218 n n 
C6 N1 IMP sing 219 n n 
N1 C2 IMP sing 220 n n 
N1 HN1 IMP sing 221 n n 
C2 N3 IMP doub 222 n n 
C2 H2 IMP sing 223 n n 
N3 C4 IMP sing 224 n n 
#
_atom_sites.entry_id                     1ME9 
_atom_sites.fract_transf_matrix[1][1]    0.006476 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006476 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006476 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 K A 1 900 900 K K1 . 
C 3 IMP A 1 602 602 IMP IMP . 
D 4 HOH A 1 901 1 HOH HOH . 
D 4 HOH A 2 902 2 HOH HOH . 
D 4 HOH A 3 903 3 HOH HOH . 
D 4 HOH A 4 904 4 HOH HOH . 
D 4 HOH A 5 905 5 HOH HOH . 
D 4 HOH A 6 906 6 HOH HOH . 
D 4 HOH A 7 907 7 HOH HOH . 
D 4 HOH A 8 908 8 HOH HOH . 
D 4 HOH A 9 909 9 HOH HOH . 
D 4 HOH A 10 910 10 HOH HOH . 
D 4 HOH A 11 911 11 HOH HOH . 
D 4 HOH A 12 912 12 HOH HOH . 
D 4 HOH A 13 913 13 HOH HOH . 
D 4 HOH A 14 914 14 HOH HOH . 
D 4 HOH A 15 915 15 HOH HOH . 
D 4 HOH A 16 916 16 HOH HOH . 
D 4 HOH A 17 917 17 HOH HOH . 
D 4 HOH A 18 918 18 HOH HOH . 
D 4 HOH A 19 919 19 HOH HOH . 
D 4 HOH A 20 920 20 HOH HOH . 
D 4 HOH A 21 921 21 HOH HOH . 
D 4 HOH A 22 922 22 HOH HOH . 
D 4 HOH A 23 923 23 HOH HOH . 
D 4 HOH A 24 924 24 HOH HOH . 
D 4 HOH A 25 925 25 HOH HOH . 
D 4 HOH A 26 926 26 HOH HOH . 
D 4 HOH A 27 927 27 HOH HOH . 
D 4 HOH A 28 928 28 HOH HOH . 
D 4 HOH A 29 929 29 HOH HOH . 
D 4 HOH A 30 930 30 HOH HOH . 
D 4 HOH A 31 931 31 HOH HOH . 
D 4 HOH A 32 932 32 HOH HOH . 
D 4 HOH A 33 933 33 HOH HOH . 
D 4 HOH A 34 934 34 HOH HOH . 
D 4 HOH A 35 935 35 HOH HOH . 
D 4 HOH A 36 936 36 HOH HOH . 
D 4 HOH A 37 937 37 HOH HOH . 
D 4 HOH A 38 938 38 HOH HOH . 
D 4 HOH A 39 939 39 HOH HOH . 
D 4 HOH A 40 940 40 HOH HOH . 
D 4 HOH A 41 941 41 HOH HOH . 
D 4 HOH A 42 942 42 HOH HOH . 
D 4 HOH A 43 943 43 HOH HOH . 
D 4 HOH A 44 944 44 HOH HOH . 
D 4 HOH A 45 945 45 HOH HOH . 
D 4 HOH A 46 946 46 HOH HOH . 
D 4 HOH A 47 947 47 HOH HOH . 
D 4 HOH A 48 948 48 HOH HOH . 
D 4 HOH A 49 949 49 HOH HOH . 
D 4 HOH A 50 950 50 HOH HOH . 
D 4 HOH A 51 951 51 HOH HOH . 
D 4 HOH A 52 952 52 HOH HOH . 
D 4 HOH A 53 953 53 HOH HOH . 
D 4 HOH A 54 954 54 HOH HOH . 
D 4 HOH A 55 955 55 HOH HOH . 
D 4 HOH A 56 956 56 HOH HOH . 
D 4 HOH A 57 957 57 HOH HOH . 
D 4 HOH A 58 958 58 HOH HOH . 
D 4 HOH A 59 959 59 HOH HOH . 
D 4 HOH A 60 960 60 HOH HOH . 
D 4 HOH A 61 961 61 HOH HOH . 
D 4 HOH A 62 962 62 HOH HOH . 
D 4 HOH A 63 963 63 HOH HOH . 
D 4 HOH A 64 964 64 HOH HOH . 
D 4 HOH A 65 965 65 HOH HOH . 
D 4 HOH A 66 966 66 HOH HOH . 
D 4 HOH A 67 967 67 HOH HOH . 
D 4 HOH A 68 968 68 HOH HOH . 
D 4 HOH A 69 969 69 HOH HOH . 
D 4 HOH A 70 970 70 HOH HOH . 
D 4 HOH A 71 971 71 HOH HOH . 
D 4 HOH A 72 972 72 HOH HOH . 
D 4 HOH A 73 973 73 HOH HOH . 
D 4 HOH A 74 974 74 HOH HOH . 
D 4 HOH A 75 975 75 HOH HOH . 
D 4 HOH A 76 976 76 HOH HOH . 
D 4 HOH A 77 977 77 HOH HOH . 
D 4 HOH A 78 978 78 HOH HOH . 
D 4 HOH A 79 979 79 HOH HOH . 
D 4 HOH A 80 980 80 HOH HOH . 
D 4 HOH A 81 981 81 HOH HOH . 
D 4 HOH A 82 982 82 HOH HOH . 
D 4 HOH A 83 983 83 HOH HOH . 
D 4 HOH A 84 984 84 HOH HOH . 
D 4 HOH A 85 985 85 HOH HOH . 
D 4 HOH A 86 986 86 HOH HOH . 
D 4 HOH A 87 987 87 HOH HOH . 
D 4 HOH A 88 988 88 HOH HOH . 
D 4 HOH A 89 989 89 HOH HOH . 
D 4 HOH A 90 990 90 HOH HOH . 
D 4 HOH A 91 991 91 HOH HOH . 
D 4 HOH A 92 992 92 HOH HOH . 
D 4 HOH A 93 993 93 HOH HOH . 
D 4 HOH A 94 994 94 HOH HOH . 
D 4 HOH A 95 995 95 HOH HOH . 
D 4 HOH A 96 996 96 HOH HOH . 
D 4 HOH A 97 997 97 HOH HOH . 
D 4 HOH A 98 998 98 HOH HOH . 
D 4 HOH A 99 999 99 HOH HOH . 
D 4 HOH A 100 1000 100 HOH HOH . 
D 4 HOH A 101 1001 101 HOH HOH . 
D 4 HOH A 102 1002 102 HOH HOH . 
D 4 HOH A 103 1003 103 HOH HOH . 
D 4 HOH A 104 1004 104 HOH HOH . 
D 4 HOH A 105 1005 105 HOH HOH . 
D 4 HOH A 106 1006 106 HOH HOH . 
D 4 HOH A 107 1007 107 HOH HOH . 
D 4 HOH A 108 1008 108 HOH HOH . 
D 4 HOH A 109 1009 109 HOH HOH . 
D 4 HOH A 110 1010 110 HOH HOH . 
D 4 HOH A 111 1011 111 HOH HOH . 
D 4 HOH A 112 1012 112 HOH HOH . 
D 4 HOH A 113 1013 113 HOH HOH . 
D 4 HOH A 114 1014 114 HOH HOH . 
D 4 HOH A 115 1015 115 HOH HOH . 
D 4 HOH A 116 1016 116 HOH HOH . 
D 4 HOH A 117 1017 117 HOH HOH . 
D 4 HOH A 118 1018 118 HOH HOH . 
D 4 HOH A 119 1019 119 HOH HOH . 
D 4 HOH A 120 1020 120 HOH HOH . 
D 4 HOH A 121 1021 121 HOH HOH . 
D 4 HOH A 122 1022 122 HOH HOH . 
D 4 HOH A 123 1023 123 HOH HOH . 
D 4 HOH A 124 1024 124 HOH HOH . 
D 4 HOH A 125 1025 125 HOH HOH . 
D 4 HOH A 126 1026 126 HOH HOH . 
D 4 HOH A 127 1027 127 HOH HOH . 
D 4 HOH A 128 1028 128 HOH HOH . 
D 4 HOH A 129 1029 129 HOH HOH . 
D 4 HOH A 130 1030 130 HOH HOH . 
D 4 HOH A 131 1031 131 HOH HOH . 
D 4 HOH A 132 1032 132 HOH HOH . 
D 4 HOH A 133 1033 133 HOH HOH . 
D 4 HOH A 134 1034 134 HOH HOH . 
D 4 HOH A 135 1035 135 HOH HOH . 
D 4 HOH A 136 1036 136 HOH HOH . 
D 4 HOH A 137 1037 137 HOH HOH . 
D 4 HOH A 138 1038 138 HOH HOH . 
D 4 HOH A 139 1039 139 HOH HOH . 
D 4 HOH A 140 1040 140 HOH HOH . 
D 4 HOH A 141 1041 141 HOH HOH . 
D 4 HOH A 142 1042 142 HOH HOH . 
D 4 HOH A 143 1043 143 HOH HOH . 
D 4 HOH A 144 1044 144 HOH HOH . 
D 4 HOH A 145 1045 145 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P IMP . . . C 3 67.729 55.171 15.018 1 32.01 ? P IMP 602 A 1 
HETATM 2 O O1P IMP . . . C 3 67.318 55.116 13.589 1 35.06 ? O1P IMP 602 A 1 
HETATM 3 O O2P IMP . . . C 3 68.541 53.958 15.324 1 37.34 ? O2P IMP 602 A 1 
HETATM 4 O O3P IMP . . . C 3 68.509 56.46 15.351 1 34.23 ? O3P IMP 602 A 1 
HETATM 5 O O5' IMP . . . C 3 66.513 55.208 16.042 1 32.49 ? O5' IMP 602 A 1 
HETATM 6 C C5' IMP . . . C 3 65.484 54.23 15.9 1 28.06 ? C5' IMP 602 A 1 
HETATM 7 C C4' IMP . . . C 3 64.416 54.369 16.948 1 29.3 ? C4' IMP 602 A 1 
HETATM 8 O O4' IMP . . . C 3 63.654 55.545 16.512 1 28.92 ? O4' IMP 602 A 1 
HETATM 9 C C3' IMP . . . C 3 63.35 53.301 17.112 1 27.97 ? C3' IMP 602 A 1 
HETATM 10 O O3' IMP . . . C 3 63.765 52.19 17.882 1 29.87 ? O3' IMP 602 A 1 
HETATM 11 C C2' IMP . . . C 3 62.219 54.048 17.747 1 28.37 ? C2' IMP 602 A 1 
HETATM 12 O O2' IMP . . . C 3 62.308 54.094 19.151 1 28.77 ? O2' IMP 602 A 1 
HETATM 13 C C1' IMP . . . C 3 62.341 55.422 17.066 1 29.44 ? C1' IMP 602 A 1 
HETATM 14 N N9 IMP . . . C 3 61.392 55.563 15.918 1 31.97 ? N9 IMP 602 A 1 
HETATM 15 C C8 IMP . . . C 3 60.89 54.644 15.016 1 32.78 ? C8 IMP 602 A 1 
HETATM 16 N N7 IMP . . . C 3 60.086 55.173 14.154 1 32.55 ? N7 IMP 602 A 1 
HETATM 17 C C5 IMP . . . C 3 60.027 56.497 14.463 1 34.42 ? C5 IMP 602 A 1 
HETATM 18 C C6 IMP . . . C 3 59.302 57.582 13.855 1 35.14 ? C6 IMP 602 A 1 
HETATM 19 O O6 IMP . . . C 3 58.555 57.521 12.883 1 36.42 ? O6 IMP 602 A 1 
HETATM 20 N N1 IMP . . . C 3 59.516 58.848 14.495 1 36.83 ? N1 IMP 602 A 1 
HETATM 21 C C2 IMP . . . C 3 60.355 59.011 15.609 1 38.21 ? C2 IMP 602 A 1 
HETATM 22 N N3 IMP . . . C 3 61.034 57.973 16.17 1 35.63 ? N3 IMP 602 A 1 
HETATM 23 C C4 IMP . . . C 3 60.832 56.774 15.563 1 34.37 ? C4 IMP 602 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           254 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#