data_1MF0
#
_model_server_result.job_id            nKFk4M0P3-sAVkboB_KrfQ 
_model_server_result.datetime_utc      '2024-11-14 17:07:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1mf0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1454}' 
#
_entry.id    1MF0 
#
_exptl.entry_id    1MF0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1MF0 
_cell.length_a            70.6 
_cell.length_b            70.6 
_cell.length_c            198.39 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1MF0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_775 -y+2,-x+2,-z+1/2 0 -1 0 -1 0 0 0 0 -1 141.2 141.2 99.195 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 43 A ASP 43 1_555 B MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? 
metalc ? metalc2 A O GLY 70 A GLY 70 1_555 B MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc3 C O1 PO4 . A PO4 1451 1_555 B MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc4 E O2A GDP . A GDP 1452 1_555 B MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc5 E O2B GDP . A GDP 1452 1_555 B MG MG . A MG 1453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     1MF0 
_atom_sites.fract_transf_matrix[1][1]    0.014164 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014164 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005041 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 1453 453 MG MG . 
C 3 PO4 A 1 1451 451 PO4 PI . 
D 4 AMP A 1 1454 450 AMP AMP . 
E 5 GDP A 1 1452 452 GDP GDP . 
F 6 HOH A 1 501 501 HOH TIP . 
F 6 HOH A 2 502 502 HOH TIP . 
F 6 HOH A 3 503 503 HOH TIP . 
F 6 HOH A 4 504 504 HOH TIP . 
F 6 HOH A 5 505 505 HOH TIP . 
F 6 HOH A 6 506 506 HOH TIP . 
F 6 HOH A 7 507 507 HOH TIP . 
F 6 HOH A 8 508 508 HOH TIP . 
F 6 HOH A 9 509 509 HOH TIP . 
F 6 HOH A 10 510 510 HOH TIP . 
F 6 HOH A 11 511 511 HOH TIP . 
F 6 HOH A 12 512 512 HOH TIP . 
F 6 HOH A 13 513 513 HOH TIP . 
F 6 HOH A 14 514 514 HOH TIP . 
F 6 HOH A 15 515 515 HOH TIP . 
F 6 HOH A 16 516 516 HOH TIP . 
F 6 HOH A 17 517 517 HOH TIP . 
F 6 HOH A 18 518 518 HOH TIP . 
F 6 HOH A 19 519 519 HOH TIP . 
F 6 HOH A 20 520 520 HOH TIP . 
F 6 HOH A 21 521 521 HOH TIP . 
F 6 HOH A 22 522 522 HOH TIP . 
F 6 HOH A 23 523 523 HOH TIP . 
F 6 HOH A 24 524 524 HOH TIP . 
F 6 HOH A 25 525 525 HOH TIP . 
F 6 HOH A 26 526 526 HOH TIP . 
F 6 HOH A 27 527 527 HOH TIP . 
F 6 HOH A 28 528 528 HOH TIP . 
F 6 HOH A 29 529 529 HOH TIP . 
F 6 HOH A 30 530 530 HOH TIP . 
F 6 HOH A 31 531 531 HOH TIP . 
F 6 HOH A 32 532 532 HOH TIP . 
F 6 HOH A 33 533 533 HOH TIP . 
F 6 HOH A 34 534 534 HOH TIP . 
F 6 HOH A 35 535 535 HOH TIP . 
F 6 HOH A 36 536 536 HOH TIP . 
F 6 HOH A 37 537 537 HOH TIP . 
F 6 HOH A 38 538 538 HOH TIP . 
F 6 HOH A 39 539 539 HOH TIP . 
F 6 HOH A 40 540 540 HOH TIP . 
F 6 HOH A 41 541 541 HOH TIP . 
F 6 HOH A 42 542 542 HOH TIP . 
F 6 HOH A 43 543 543 HOH TIP . 
F 6 HOH A 44 544 544 HOH TIP . 
F 6 HOH A 45 545 545 HOH TIP . 
F 6 HOH A 46 546 546 HOH TIP . 
F 6 HOH A 47 547 547 HOH TIP . 
F 6 HOH A 48 548 548 HOH TIP . 
F 6 HOH A 49 549 549 HOH TIP . 
F 6 HOH A 50 550 550 HOH TIP . 
F 6 HOH A 51 551 551 HOH TIP . 
F 6 HOH A 52 552 552 HOH TIP . 
F 6 HOH A 53 553 553 HOH TIP . 
F 6 HOH A 54 554 554 HOH TIP . 
F 6 HOH A 55 555 555 HOH TIP . 
F 6 HOH A 56 556 556 HOH TIP . 
F 6 HOH A 57 557 557 HOH TIP . 
F 6 HOH A 58 558 558 HOH TIP . 
F 6 HOH A 59 559 559 HOH TIP . 
F 6 HOH A 60 560 560 HOH TIP . 
F 6 HOH A 61 561 561 HOH TIP . 
F 6 HOH A 62 562 562 HOH TIP . 
F 6 HOH A 63 563 563 HOH TIP . 
F 6 HOH A 64 564 564 HOH TIP . 
F 6 HOH A 65 565 565 HOH TIP . 
F 6 HOH A 66 566 566 HOH TIP . 
F 6 HOH A 67 567 567 HOH TIP . 
F 6 HOH A 68 568 568 HOH TIP . 
F 6 HOH A 69 569 569 HOH TIP . 
F 6 HOH A 70 570 570 HOH TIP . 
F 6 HOH A 71 571 571 HOH TIP . 
F 6 HOH A 72 572 572 HOH TIP . 
F 6 HOH A 73 573 573 HOH TIP . 
F 6 HOH A 74 574 574 HOH TIP . 
F 6 HOH A 75 575 575 HOH TIP . 
F 6 HOH A 76 576 576 HOH TIP . 
F 6 HOH A 77 577 577 HOH TIP . 
F 6 HOH A 78 578 578 HOH TIP . 
F 6 HOH A 79 579 579 HOH TIP . 
F 6 HOH A 80 580 580 HOH TIP . 
F 6 HOH A 81 581 581 HOH TIP . 
F 6 HOH A 82 582 582 HOH TIP . 
F 6 HOH A 83 583 583 HOH TIP . 
F 6 HOH A 84 584 584 HOH TIP . 
F 6 HOH A 85 585 585 HOH TIP . 
F 6 HOH A 86 586 586 HOH TIP . 
F 6 HOH A 87 587 587 HOH TIP . 
F 6 HOH A 88 588 588 HOH TIP . 
F 6 HOH A 89 589 589 HOH TIP . 
F 6 HOH A 90 590 590 HOH TIP . 
F 6 HOH A 91 591 591 HOH TIP . 
F 6 HOH A 92 592 592 HOH TIP . 
F 6 HOH A 93 593 593 HOH TIP . 
F 6 HOH A 94 594 594 HOH TIP . 
F 6 HOH A 95 595 595 HOH TIP . 
F 6 HOH A 96 596 596 HOH TIP . 
F 6 HOH A 97 597 597 HOH TIP . 
F 6 HOH A 98 598 598 HOH TIP . 
F 6 HOH A 99 599 599 HOH TIP . 
F 6 HOH A 100 600 600 HOH TIP . 
F 6 HOH A 101 601 601 HOH TIP . 
F 6 HOH A 102 602 602 HOH TIP . 
F 6 HOH A 103 603 603 HOH TIP . 
F 6 HOH A 104 604 604 HOH TIP . 
F 6 HOH A 105 605 605 HOH TIP . 
F 6 HOH A 106 606 606 HOH TIP . 
F 6 HOH A 107 607 607 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . D 4 61.42 66.917 39.873 1 33.78 ? P AMP 1454 A 1 
HETATM 2 O O1P AMP . . . D 4 59.939 66.572 39.97 1 35.79 ? O1P AMP 1454 A 1 
HETATM 3 O O2P AMP . . . D 4 61.768 68.146 40.694 1 32.87 ? O2P AMP 1454 A 1 
HETATM 4 O O3P AMP . . . D 4 62.304 65.718 40.167 1 32.88 ? O3P AMP 1454 A 1 
HETATM 5 O O5' AMP . . . D 4 61.732 67.304 38.315 1 34.48 ? O5' AMP 1454 A 1 
HETATM 6 C C5' AMP . . . D 4 63.019 67.844 37.918 1 32.93 ? C5' AMP 1454 A 1 
HETATM 7 C C4' AMP . . . D 4 63.596 67.04 36.772 1 30.75 ? C4' AMP 1454 A 1 
HETATM 8 O O4' AMP . . . D 4 63.769 65.657 37.167 1 28.65 ? O4' AMP 1454 A 1 
HETATM 9 C C3' AMP . . . D 4 62.784 67.032 35.478 1 32.19 ? C3' AMP 1454 A 1 
HETATM 10 O O3' AMP . . . D 4 63.589 67.357 34.342 1 31.29 ? O3' AMP 1454 A 1 
HETATM 11 C C2' AMP . . . D 4 62.213 65.62 35.416 1 30.03 ? C2' AMP 1454 A 1 
HETATM 12 O O2' AMP . . . D 4 62.028 65.134 34.101 1 31.7 ? O2' AMP 1454 A 1 
HETATM 13 C C1' AMP . . . D 4 63.281 64.812 36.15 1 27.12 ? C1' AMP 1454 A 1 
HETATM 14 N N9 AMP . . . D 4 62.676 63.649 36.788 1 24.41 ? N9 AMP 1454 A 1 
HETATM 15 C C8 AMP . . . D 4 62 63.61 37.985 1 24.34 ? C8 AMP 1454 A 1 
HETATM 16 N N7 AMP . . . D 4 61.539 62.421 38.292 1 24.6 ? N7 AMP 1454 A 1 
HETATM 17 C C5 AMP . . . D 4 61.942 61.624 37.228 1 23.82 ? C5 AMP 1454 A 1 
HETATM 18 C C6 AMP . . . D 4 61.762 60.262 36.951 1 22.83 ? C6 AMP 1454 A 1 
HETATM 19 N N6 AMP . . . D 4 61.095 59.431 37.748 1 23.32 ? N6 AMP 1454 A 1 
HETATM 20 N N1 AMP . . . D 4 62.299 59.777 35.807 1 22.45 ? N1 AMP 1454 A 1 
HETATM 21 C C2 AMP . . . D 4 62.963 60.616 35.006 1 18.85 ? C2 AMP 1454 A 1 
HETATM 22 N N3 AMP . . . D 4 63.192 61.92 35.154 1 21.18 ? N3 AMP 1454 A 1 
HETATM 23 C C4 AMP . . . D 4 62.65 62.367 36.299 1 22.53 ? C4 AMP 1454 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           347 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#