data_1ML1
#
_model_server_result.job_id            aPzgiMtMdMl0Oc-lKuDT4A 
_model_server_result.datetime_utc      '2024-11-16 16:56:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ml1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":600}' 
#
_entry.id    1ML1 
#
_exptl.entry_id    1ML1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              156.031 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-PHOSPHOGLYCOLIC ACID' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1ML1 
_cell.length_a            165.23 
_cell.length_b            165.23 
_cell.length_c            51.23 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ML1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        143 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,M,N 1 1 
C,D,I,J,O,P 2 1 
E,F,K,L,Q,R 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C2 H5 O6 P' 
_chem_comp.formula_weight    156.031 
_chem_comp.id                PGA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-PHOSPHOGLYCOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P PGA sing 237 n n 
P O2P PGA doub 238 n n 
P O3P PGA sing 239 n n 
P O4P PGA sing 240 n n 
O1P C2 PGA sing 241 n n 
O3P HOP3 PGA sing 242 n n 
O4P HOP4 PGA sing 243 n n 
C2 C1 PGA sing 244 n n 
C2 H21 PGA sing 245 n n 
C2 H22 PGA sing 246 n n 
C1 O1 PGA doub 247 n n 
C1 O2 PGA sing 248 n n 
O2 HO2 PGA sing 249 n n 
#
_atom_sites.entry_id                     1ML1 
_atom_sites.fract_transf_matrix[1][1]    0.006052 
_atom_sites.fract_transf_matrix[1][2]    0.003494 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006988 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01952 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 PGA A 1 600 600 PGA PGA . 
H 2 PGA C 1 600 600 PGA PGA . 
I 2 PGA E 1 600 600 PGA PGA . 
J 2 PGA G 1 600 600 PGA PGA . 
K 2 PGA I 1 600 600 PGA PGA . 
L 2 PGA K 1 600 600 PGA PGA . 
M 3 HOH A 1 601 1 HOH HOH . 
M 3 HOH A 2 602 2 HOH HOH . 
M 3 HOH A 3 603 3 HOH HOH . 
M 3 HOH A 4 604 4 HOH HOH . 
M 3 HOH A 5 605 5 HOH HOH . 
M 3 HOH A 6 606 6 HOH HOH . 
M 3 HOH A 7 607 7 HOH HOH . 
M 3 HOH A 8 608 9 HOH HOH . 
M 3 HOH A 9 609 10 HOH HOH . 
M 3 HOH A 10 610 15 HOH HOH . 
N 3 HOH C 1 601 11 HOH HOH . 
N 3 HOH C 2 602 12 HOH HOH . 
N 3 HOH C 3 603 13 HOH HOH . 
N 3 HOH C 4 604 14 HOH HOH . 
N 3 HOH C 5 605 16 HOH HOH . 
N 3 HOH C 6 606 17 HOH HOH . 
N 3 HOH C 7 607 23 HOH HOH . 
O 3 HOH E 1 601 8 HOH HOH . 
O 3 HOH E 2 602 18 HOH HOH . 
O 3 HOH E 3 603 19 HOH HOH . 
O 3 HOH E 4 604 20 HOH HOH . 
O 3 HOH E 5 605 21 HOH HOH . 
O 3 HOH E 6 606 22 HOH HOH . 
O 3 HOH E 7 607 24 HOH HOH . 
O 3 HOH E 8 608 25 HOH HOH . 
P 3 HOH G 1 601 26 HOH HOH . 
P 3 HOH G 2 602 27 HOH HOH . 
P 3 HOH G 3 603 28 HOH HOH . 
P 3 HOH G 4 604 29 HOH HOH . 
P 3 HOH G 5 605 30 HOH HOH . 
P 3 HOH G 6 606 33 HOH HOH . 
P 3 HOH G 7 607 34 HOH HOH . 
P 3 HOH G 8 608 35 HOH HOH . 
P 3 HOH G 9 609 36 HOH HOH . 
Q 3 HOH I 1 601 31 HOH HOH . 
Q 3 HOH I 2 602 32 HOH HOH . 
Q 3 HOH I 3 603 37 HOH HOH . 
Q 3 HOH I 4 604 38 HOH HOH . 
Q 3 HOH I 5 605 39 HOH HOH . 
Q 3 HOH I 6 606 40 HOH HOH . 
Q 3 HOH I 7 607 41 HOH HOH . 
Q 3 HOH I 8 608 42 HOH HOH . 
Q 3 HOH I 9 609 43 HOH HOH . 
Q 3 HOH I 10 610 45 HOH HOH . 
Q 3 HOH I 11 611 46 HOH HOH . 
Q 3 HOH I 12 612 47 HOH HOH . 
R 3 HOH K 1 601 44 HOH HOH . 
R 3 HOH K 2 602 48 HOH HOH . 
R 3 HOH K 3 603 49 HOH HOH . 
R 3 HOH K 4 604 50 HOH HOH . 
R 3 HOH K 5 605 51 HOH HOH . 
R 3 HOH K 6 606 52 HOH HOH . 
R 3 HOH K 7 607 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PGA . . . J 2 42.721 42.233 32.278 1 29.66 ? P PGA 600 G 1 
HETATM 2 O O1P PGA . . . J 2 42.205 43.164 31.111 1 29.66 ? O1P PGA 600 G 1 
HETATM 3 O O2P PGA . . . J 2 43.048 40.898 31.681 1 29.66 ? O2P PGA 600 G 1 
HETATM 4 O O3P PGA . . . J 2 41.627 42.199 33.311 1 29.66 ? O3P PGA 600 G 1 
HETATM 5 O O4P PGA . . . J 2 44.011 42.881 32.875 1 29.66 ? O4P PGA 600 G 1 
HETATM 6 C C2 PGA . . . J 2 42.884 43.136 29.887 1 29.66 ? C2 PGA 600 G 1 
HETATM 7 C C1 PGA . . . J 2 42.351 44.133 28.908 1 29.66 ? C1 PGA 600 G 1 
HETATM 8 O O1 PGA . . . J 2 43.107 44.334 27.902 1 29.66 ? O1 PGA 600 G 1 
HETATM 9 O O2 PGA . . . J 2 41.284 44.682 29.079 1 29.66 ? O2 PGA 600 G 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          23 
_model_server_stats.element_count           9 
#