data_1ML7
#
_model_server_result.job_id            ZpN82E-PsAS-Ik5vTWXxuw 
_model_server_result.datetime_utc      '2024-11-26 16:09:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ml7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":187}' 
#
_entry.id    1ML7 
#
_exptl.entry_id    1ML7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              193.974 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-IODOPYRAZOLE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.05 
_cell.angle_gamma         90 
_cell.entry_id            1ML7 
_cell.length_a            70.404 
_cell.length_b            42.763 
_cell.length_c            52.769 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ML7 
_symmetry.cell_setting             monoclinic 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 122 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf2 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.996 ? 
disulf ? disulf3 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc1 A NE2 HIS 59 A HIS 59 1_555 B FE HEV . A HEV 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc2 B FE HEV . A HEV 185 1_555 C N1 PYZ . A PYZ 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
#
_chem_comp.formula           'C3 H3 I N2' 
_chem_comp.formula_weight    193.974 
_chem_comp.id                PYZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-IODOPYRAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 N2 PYZ sing 361 n y 
N1 C5 PYZ sing 362 n y 
N1 HN1 PYZ sing 363 n n 
N2 C3 PYZ doub 364 n y 
C3 C4 PYZ sing 365 n y 
C3 H3 PYZ sing 366 n n 
C4 I4 PYZ sing 367 n n 
C4 C5 PYZ doub 368 n y 
C5 H5 PYZ sing 369 n n 
#
_atom_sites.entry_id                     1ML7 
_atom_sites.fract_transf_matrix[1][1]    0.014204 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001005 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023385 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018998 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEV A 1 185 185 HEV HEV . 
C 3 PYZ A 1 186 186 PYZ PYZ . 
D 3 PYZ A 1 187 187 PYZ PYZ . 
E 4 HOH A 1 201 201 HOH HOH . 
E 4 HOH A 2 202 202 HOH HOH . 
E 4 HOH A 3 203 203 HOH HOH . 
E 4 HOH A 4 204 204 HOH HOH . 
E 4 HOH A 5 205 205 HOH HOH . 
E 4 HOH A 6 206 206 HOH HOH . 
E 4 HOH A 7 207 207 HOH HOH . 
E 4 HOH A 8 208 208 HOH HOH . 
E 4 HOH A 9 209 209 HOH HOH . 
E 4 HOH A 10 210 210 HOH HOH . 
E 4 HOH A 11 211 211 HOH HOH . 
E 4 HOH A 12 212 212 HOH HOH . 
E 4 HOH A 13 213 213 HOH HOH . 
E 4 HOH A 14 214 214 HOH HOH . 
E 4 HOH A 15 215 215 HOH HOH . 
E 4 HOH A 16 216 216 HOH HOH . 
E 4 HOH A 17 217 217 HOH HOH . 
E 4 HOH A 18 218 218 HOH HOH . 
E 4 HOH A 19 219 219 HOH HOH . 
E 4 HOH A 20 220 220 HOH HOH . 
E 4 HOH A 21 221 221 HOH HOH . 
E 4 HOH A 22 222 222 HOH HOH . 
E 4 HOH A 23 223 223 HOH HOH . 
E 4 HOH A 24 224 224 HOH HOH . 
E 4 HOH A 25 225 225 HOH HOH . 
E 4 HOH A 26 226 226 HOH HOH . 
E 4 HOH A 27 227 227 HOH HOH . 
E 4 HOH A 28 228 228 HOH HOH . 
E 4 HOH A 29 229 229 HOH HOH . 
E 4 HOH A 30 230 230 HOH HOH . 
E 4 HOH A 31 231 231 HOH HOH . 
E 4 HOH A 32 232 232 HOH HOH . 
E 4 HOH A 33 233 233 HOH HOH . 
E 4 HOH A 34 234 234 HOH HOH . 
E 4 HOH A 35 235 235 HOH HOH . 
E 4 HOH A 36 236 236 HOH HOH . 
E 4 HOH A 37 237 237 HOH HOH . 
E 4 HOH A 38 238 238 HOH HOH . 
E 4 HOH A 39 239 239 HOH HOH . 
E 4 HOH A 40 240 240 HOH HOH . 
E 4 HOH A 41 241 241 HOH HOH . 
E 4 HOH A 42 242 242 HOH HOH . 
E 4 HOH A 43 243 243 HOH HOH . 
E 4 HOH A 44 244 244 HOH HOH . 
E 4 HOH A 45 245 245 HOH HOH . 
E 4 HOH A 46 246 246 HOH HOH . 
E 4 HOH A 47 247 247 HOH HOH . 
E 4 HOH A 48 248 248 HOH HOH . 
E 4 HOH A 49 249 249 HOH HOH . 
E 4 HOH A 50 250 250 HOH HOH . 
E 4 HOH A 51 251 251 HOH HOH . 
E 4 HOH A 52 252 252 HOH HOH . 
E 4 HOH A 53 253 253 HOH HOH . 
E 4 HOH A 54 254 254 HOH HOH . 
E 4 HOH A 55 255 255 HOH HOH . 
E 4 HOH A 56 256 256 HOH HOH . 
E 4 HOH A 57 257 257 HOH HOH . 
E 4 HOH A 58 258 258 HOH HOH . 
E 4 HOH A 59 259 259 HOH HOH . 
E 4 HOH A 60 260 260 HOH HOH . 
E 4 HOH A 61 261 261 HOH HOH . 
E 4 HOH A 62 262 262 HOH HOH . 
E 4 HOH A 63 263 263 HOH HOH . 
E 4 HOH A 64 264 264 HOH HOH . 
E 4 HOH A 65 265 265 HOH HOH . 
E 4 HOH A 66 266 266 HOH HOH . 
E 4 HOH A 67 267 267 HOH HOH . 
E 4 HOH A 68 268 268 HOH HOH . 
E 4 HOH A 69 269 269 HOH HOH . 
E 4 HOH A 70 270 270 HOH HOH . 
E 4 HOH A 71 271 271 HOH HOH . 
E 4 HOH A 72 272 272 HOH HOH . 
E 4 HOH A 73 273 273 HOH HOH . 
E 4 HOH A 74 274 274 HOH HOH . 
E 4 HOH A 75 275 275 HOH HOH . 
E 4 HOH A 76 276 276 HOH HOH . 
E 4 HOH A 77 277 277 HOH HOH . 
E 4 HOH A 78 278 278 HOH HOH . 
E 4 HOH A 79 279 279 HOH HOH . 
E 4 HOH A 80 280 280 HOH HOH . 
E 4 HOH A 81 281 281 HOH HOH . 
E 4 HOH A 82 282 282 HOH HOH . 
E 4 HOH A 83 283 283 HOH HOH . 
E 4 HOH A 84 284 284 HOH HOH . 
E 4 HOH A 85 285 285 HOH HOH . 
E 4 HOH A 86 286 286 HOH HOH . 
E 4 HOH A 87 287 287 HOH HOH . 
E 4 HOH A 88 288 288 HOH HOH . 
E 4 HOH A 89 289 289 HOH HOH . 
E 4 HOH A 90 290 290 HOH HOH . 
E 4 HOH A 91 291 291 HOH HOH . 
E 4 HOH A 92 292 292 HOH HOH . 
E 4 HOH A 93 293 293 HOH HOH . 
E 4 HOH A 94 294 294 HOH HOH . 
E 4 HOH A 95 295 295 HOH HOH . 
E 4 HOH A 96 296 296 HOH HOH . 
E 4 HOH A 97 297 297 HOH HOH . 
E 4 HOH A 98 298 298 HOH HOH . 
E 4 HOH A 99 299 299 HOH HOH . 
E 4 HOH A 100 300 300 HOH HOH . 
E 4 HOH A 101 301 301 HOH HOH . 
E 4 HOH A 102 302 302 HOH HOH . 
E 4 HOH A 103 303 303 HOH HOH . 
E 4 HOH A 104 304 304 HOH HOH . 
E 4 HOH A 105 305 305 HOH HOH . 
E 4 HOH A 106 306 306 HOH HOH . 
E 4 HOH A 107 307 307 HOH HOH . 
E 4 HOH A 108 308 308 HOH HOH . 
E 4 HOH A 109 309 309 HOH HOH . 
E 4 HOH A 110 310 310 HOH HOH . 
E 4 HOH A 111 311 311 HOH HOH . 
E 4 HOH A 112 312 312 HOH HOH . 
E 4 HOH A 113 313 313 HOH HOH . 
E 4 HOH A 114 314 314 HOH HOH . 
E 4 HOH A 115 315 315 HOH HOH . 
E 4 HOH A 116 317 317 HOH HOH . 
E 4 HOH A 117 318 318 HOH HOH . 
E 4 HOH A 118 319 319 HOH HOH . 
E 4 HOH A 119 320 320 HOH HOH . 
E 4 HOH A 120 321 321 HOH HOH . 
E 4 HOH A 121 322 322 HOH HOH . 
E 4 HOH A 122 323 323 HOH HOH . 
E 4 HOH A 123 324 324 HOH HOH . 
E 4 HOH A 124 325 325 HOH HOH . 
E 4 HOH A 125 326 326 HOH HOH . 
E 4 HOH A 126 327 327 HOH HOH . 
E 4 HOH A 127 328 328 HOH HOH . 
E 4 HOH A 128 329 329 HOH HOH . 
E 4 HOH A 129 330 330 HOH HOH . 
E 4 HOH A 130 331 331 HOH HOH . 
E 4 HOH A 131 332 332 HOH HOH . 
E 4 HOH A 132 333 333 HOH HOH . 
E 4 HOH A 133 334 334 HOH HOH . 
E 4 HOH A 134 335 335 HOH HOH . 
E 4 HOH A 135 336 336 HOH HOH . 
E 4 HOH A 136 337 337 HOH HOH . 
E 4 HOH A 137 338 338 HOH HOH . 
E 4 HOH A 138 339 339 HOH HOH . 
E 4 HOH A 139 340 340 HOH HOH . 
E 4 HOH A 140 341 341 HOH HOH . 
E 4 HOH A 141 343 343 HOH HOH . 
E 4 HOH A 142 344 344 HOH HOH . 
E 4 HOH A 143 345 345 HOH HOH . 
E 4 HOH A 144 346 346 HOH HOH . 
E 4 HOH A 145 347 347 HOH HOH . 
E 4 HOH A 146 348 348 HOH HOH . 
E 4 HOH A 147 350 350 HOH HOH . 
E 4 HOH A 148 351 351 HOH HOH . 
E 4 HOH A 149 352 352 HOH HOH . 
E 4 HOH A 150 354 354 HOH HOH . 
E 4 HOH A 151 355 355 HOH HOH . 
E 4 HOH A 152 356 356 HOH HOH . 
E 4 HOH A 153 357 357 HOH HOH . 
E 4 HOH A 154 358 358 HOH HOH . 
E 4 HOH A 155 359 359 HOH HOH . 
E 4 HOH A 156 360 360 HOH HOH . 
E 4 HOH A 157 361 361 HOH HOH . 
E 4 HOH A 158 362 362 HOH HOH . 
E 4 HOH A 159 363 363 HOH HOH . 
E 4 HOH A 160 364 364 HOH HOH . 
E 4 HOH A 161 365 365 HOH HOH . 
E 4 HOH A 162 366 366 HOH HOH . 
E 4 HOH A 163 367 367 HOH HOH . 
E 4 HOH A 164 368 368 HOH HOH . 
E 4 HOH A 165 370 370 HOH HOH . 
E 4 HOH A 166 371 371 HOH HOH . 
E 4 HOH A 167 372 372 HOH HOH . 
E 4 HOH A 168 373 373 HOH HOH . 
E 4 HOH A 169 374 374 HOH HOH . 
E 4 HOH A 170 376 376 HOH HOH . 
E 4 HOH A 171 377 377 HOH HOH . 
E 4 HOH A 172 378 378 HOH HOH . 
E 4 HOH A 173 379 379 HOH HOH . 
E 4 HOH A 174 380 380 HOH HOH . 
E 4 HOH A 175 382 382 HOH HOH . 
E 4 HOH A 176 383 383 HOH HOH . 
E 4 HOH A 177 384 384 HOH HOH . 
E 4 HOH A 178 386 386 HOH HOH . 
E 4 HOH A 179 388 388 HOH HOH . 
E 4 HOH A 180 389 389 HOH HOH . 
E 4 HOH A 181 390 390 HOH HOH . 
E 4 HOH A 182 391 391 HOH HOH . 
E 4 HOH A 183 392 392 HOH HOH . 
E 4 HOH A 184 393 393 HOH HOH . 
E 4 HOH A 185 394 394 HOH HOH . 
E 4 HOH A 186 395 395 HOH HOH . 
E 4 HOH A 187 396 396 HOH HOH . 
E 4 HOH A 188 397 397 HOH HOH . 
E 4 HOH A 189 398 398 HOH HOH . 
E 4 HOH A 190 399 399 HOH HOH . 
E 4 HOH A 191 400 400 HOH HOH . 
E 4 HOH A 192 401 401 HOH HOH . 
E 4 HOH A 193 402 402 HOH HOH . 
E 4 HOH A 194 403 403 HOH HOH . 
E 4 HOH A 195 404 404 HOH HOH . 
E 4 HOH A 196 405 405 HOH HOH . 
E 4 HOH A 197 407 407 HOH HOH . 
E 4 HOH A 198 408 408 HOH HOH . 
E 4 HOH A 199 411 411 HOH HOH . 
E 4 HOH A 200 412 412 HOH HOH . 
E 4 HOH A 201 413 413 HOH HOH . 
E 4 HOH A 202 414 414 HOH HOH . 
E 4 HOH A 203 417 417 HOH HOH . 
E 4 HOH A 204 418 418 HOH HOH . 
E 4 HOH A 205 419 419 HOH HOH . 
E 4 HOH A 206 420 420 HOH HOH . 
E 4 HOH A 207 422 422 HOH HOH . 
E 4 HOH A 208 424 424 HOH HOH . 
E 4 HOH A 209 425 425 HOH HOH . 
E 4 HOH A 210 427 427 HOH HOH . 
E 4 HOH A 211 428 428 HOH HOH . 
E 4 HOH A 212 429 429 HOH HOH . 
E 4 HOH A 213 430 430 HOH HOH . 
E 4 HOH A 214 431 431 HOH HOH . 
E 4 HOH A 215 432 432 HOH HOH . 
E 4 HOH A 216 433 433 HOH HOH . 
E 4 HOH A 217 434 434 HOH HOH . 
E 4 HOH A 218 435 435 HOH HOH . 
E 4 HOH A 219 436 436 HOH HOH . 
E 4 HOH A 220 437 437 HOH HOH . 
E 4 HOH A 221 438 438 HOH HOH . 
E 4 HOH A 222 439 439 HOH HOH . 
E 4 HOH A 223 440 440 HOH HOH . 
E 4 HOH A 224 441 441 HOH HOH . 
E 4 HOH A 225 442 442 HOH HOH . 
E 4 HOH A 226 443 443 HOH HOH . 
E 4 HOH A 227 444 444 HOH HOH . 
E 4 HOH A 228 445 445 HOH HOH . 
E 4 HOH A 229 446 446 HOH HOH . 
E 4 HOH A 230 448 448 HOH HOH . 
E 4 HOH A 231 449 449 HOH HOH . 
E 4 HOH A 232 450 450 HOH HOH . 
E 4 HOH A 233 451 451 HOH HOH . 
E 4 HOH A 234 452 452 HOH HOH . 
E 4 HOH A 235 453 453 HOH HOH . 
E 4 HOH A 236 454 454 HOH HOH . 
E 4 HOH A 237 455 455 HOH HOH . 
E 4 HOH A 238 456 456 HOH HOH . 
E 4 HOH A 239 457 457 HOH HOH . 
E 4 HOH A 240 458 458 HOH HOH . 
E 4 HOH A 241 459 459 HOH HOH . 
E 4 HOH A 242 460 460 HOH HOH . 
E 4 HOH A 243 462 462 HOH HOH . 
E 4 HOH A 244 463 463 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 PYZ . . . D 3 -0.934 25.313 27.283 0.5 13.19 ? N1 PYZ 187 A 1 
HETATM 2 N N2 PYZ . . . D 3 -1.841 24.349 27.393 0.5 13.02 ? N2 PYZ 187 A 1 
HETATM 3 C C3 PYZ . . . D 3 -2.02 23.746 26.211 0.5 11.18 ? C3 PYZ 187 A 1 
HETATM 4 C C4 PYZ . . . D 3 -1.22 24.35 25.258 0.5 13.37 ? C4 PYZ 187 A 1 
HETATM 5 I I4 PYZ . . . D 3 -0.969 23.869 23.262 0.5 9.76 ? I4 PYZ 187 A 1 
HETATM 6 C C5 PYZ . . . D 3 -0.556 25.325 26.023 0.5 10.87 ? C5 PYZ 187 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#