data_1MNE # _model_server_result.job_id 7UjbDTk3DsVGI1-opj92nQ _model_server_result.datetime_utc '2024-11-26 17:10:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":999}' # _entry.id 1MNE # _exptl.entry_id 1MNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.959 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PYROPHOSPHATE 2-' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MNE _cell.length_a 105.2 _cell.length_b 182.1 _cell.length_c 54.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 186 A THR 186 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc2 A OG SER 237 A SER 237 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc3 D O HOH . A HOH 946 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc4 D O HOH . A HOH 947 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc5 B MG MG . A MG 998 1_555 C O1 POP . A POP 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc6 B MG MG . A MG 998 1_555 C O4 POP . A POP 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? # _chem_comp.formula 'H2 O7 P2 -2' _chem_comp.formula_weight 175.959 _chem_comp.id POP _chem_comp.mon_nstd_flag . _chem_comp.name 'PYROPHOSPHATE 2-' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 POP doub 260 n n P1 O2 POP sing 261 n n P1 O3 POP sing 262 n n P1 O POP sing 263 n n O2 HO2 POP sing 264 n n O P2 POP sing 265 n n P2 O4 POP doub 266 n n P2 O5 POP sing 267 n n P2 O6 POP sing 268 n n O5 HO5 POP sing 269 n n # _atom_sites.entry_id 1MNE _atom_sites.fract_transf_matrix[1][1] 0.009506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005491 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018349 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 998 998 MG MG . C 3 POP A 1 999 999 POP POP . D 4 HOH A 1 800 800 HOH HOH . D 4 HOH A 2 801 801 HOH HOH . D 4 HOH A 3 802 802 HOH HOH . D 4 HOH A 4 803 803 HOH HOH . D 4 HOH A 5 804 804 HOH HOH . D 4 HOH A 6 805 805 HOH HOH . D 4 HOH A 7 806 806 HOH HOH . D 4 HOH A 8 807 807 HOH HOH . D 4 HOH A 9 808 808 HOH HOH . D 4 HOH A 10 809 809 HOH HOH . D 4 HOH A 11 810 810 HOH HOH . D 4 HOH A 12 811 811 HOH HOH . D 4 HOH A 13 812 812 HOH HOH . D 4 HOH A 14 813 813 HOH HOH . D 4 HOH A 15 814 814 HOH HOH . D 4 HOH A 16 815 815 HOH HOH . D 4 HOH A 17 816 816 HOH HOH . D 4 HOH A 18 817 817 HOH HOH . D 4 HOH A 19 818 818 HOH HOH . D 4 HOH A 20 819 819 HOH HOH . D 4 HOH A 21 820 820 HOH HOH . D 4 HOH A 22 821 821 HOH HOH . D 4 HOH A 23 822 822 HOH HOH . D 4 HOH A 24 823 823 HOH HOH . D 4 HOH A 25 824 824 HOH HOH . D 4 HOH A 26 825 825 HOH HOH . D 4 HOH A 27 826 826 HOH HOH . D 4 HOH A 28 827 827 HOH HOH . D 4 HOH A 29 828 828 HOH HOH . D 4 HOH A 30 829 829 HOH HOH . D 4 HOH A 31 830 830 HOH HOH . D 4 HOH A 32 831 831 HOH HOH . D 4 HOH A 33 832 832 HOH HOH . D 4 HOH A 34 833 833 HOH HOH . D 4 HOH A 35 834 834 HOH HOH . D 4 HOH A 36 835 835 HOH HOH . D 4 HOH A 37 836 836 HOH HOH . D 4 HOH A 38 837 837 HOH HOH . D 4 HOH A 39 838 838 HOH HOH . D 4 HOH A 40 839 839 HOH HOH . D 4 HOH A 41 840 840 HOH HOH . D 4 HOH A 42 841 841 HOH HOH . D 4 HOH A 43 842 842 HOH HOH . D 4 HOH A 44 843 843 HOH HOH . D 4 HOH A 45 844 844 HOH HOH . D 4 HOH A 46 845 845 HOH HOH . D 4 HOH A 47 846 846 HOH HOH . D 4 HOH A 48 847 847 HOH HOH . D 4 HOH A 49 848 848 HOH HOH . D 4 HOH A 50 849 849 HOH HOH . D 4 HOH A 51 850 850 HOH HOH . D 4 HOH A 52 851 851 HOH HOH . D 4 HOH A 53 852 852 HOH HOH . D 4 HOH A 54 853 853 HOH HOH . D 4 HOH A 55 854 854 HOH HOH . D 4 HOH A 56 855 855 HOH HOH . D 4 HOH A 57 856 856 HOH HOH . D 4 HOH A 58 857 857 HOH HOH . D 4 HOH A 59 858 858 HOH HOH . D 4 HOH A 60 859 859 HOH HOH . D 4 HOH A 61 860 860 HOH HOH . D 4 HOH A 62 861 861 HOH HOH . D 4 HOH A 63 862 862 HOH HOH . D 4 HOH A 64 863 863 HOH HOH . D 4 HOH A 65 864 864 HOH HOH . D 4 HOH A 66 865 865 HOH HOH . D 4 HOH A 67 866 866 HOH HOH . D 4 HOH A 68 867 867 HOH HOH . D 4 HOH A 69 868 868 HOH HOH . D 4 HOH A 70 869 869 HOH HOH . D 4 HOH A 71 870 870 HOH HOH . D 4 HOH A 72 871 871 HOH HOH . D 4 HOH A 73 872 872 HOH HOH . D 4 HOH A 74 873 873 HOH HOH . D 4 HOH A 75 874 874 HOH HOH . D 4 HOH A 76 875 875 HOH HOH . D 4 HOH A 77 876 876 HOH HOH . D 4 HOH A 78 877 877 HOH HOH . D 4 HOH A 79 878 878 HOH HOH . D 4 HOH A 80 879 879 HOH HOH . D 4 HOH A 81 880 880 HOH HOH . D 4 HOH A 82 881 881 HOH HOH . D 4 HOH A 83 882 882 HOH HOH . D 4 HOH A 84 883 883 HOH HOH . D 4 HOH A 85 884 884 HOH HOH . D 4 HOH A 86 885 885 HOH HOH . D 4 HOH A 87 886 886 HOH HOH . D 4 HOH A 88 887 887 HOH HOH . D 4 HOH A 89 888 888 HOH HOH . D 4 HOH A 90 889 889 HOH HOH . D 4 HOH A 91 890 890 HOH HOH . D 4 HOH A 92 891 891 HOH HOH . D 4 HOH A 93 892 892 HOH HOH . D 4 HOH A 94 893 893 HOH HOH . D 4 HOH A 95 894 894 HOH HOH . D 4 HOH A 96 895 895 HOH HOH . D 4 HOH A 97 896 896 HOH HOH . D 4 HOH A 98 897 897 HOH HOH . D 4 HOH A 99 898 898 HOH HOH . D 4 HOH A 100 899 899 HOH HOH . D 4 HOH A 101 900 900 HOH HOH . D 4 HOH A 102 901 901 HOH HOH . D 4 HOH A 103 902 902 HOH HOH . D 4 HOH A 104 903 903 HOH HOH . D 4 HOH A 105 904 904 HOH HOH . D 4 HOH A 106 905 905 HOH HOH . D 4 HOH A 107 906 906 HOH HOH . D 4 HOH A 108 907 907 HOH HOH . D 4 HOH A 109 908 908 HOH HOH . D 4 HOH A 110 909 909 HOH HOH . D 4 HOH A 111 910 910 HOH HOH . D 4 HOH A 112 911 911 HOH HOH . D 4 HOH A 113 912 912 HOH HOH . D 4 HOH A 114 913 913 HOH HOH . D 4 HOH A 115 914 914 HOH HOH . D 4 HOH A 116 915 915 HOH HOH . D 4 HOH A 117 916 916 HOH HOH . D 4 HOH A 118 917 917 HOH HOH . D 4 HOH A 119 918 918 HOH HOH . D 4 HOH A 120 919 919 HOH HOH . D 4 HOH A 121 920 920 HOH HOH . D 4 HOH A 122 921 921 HOH HOH . D 4 HOH A 123 922 922 HOH HOH . D 4 HOH A 124 923 923 HOH HOH . D 4 HOH A 125 924 924 HOH HOH . D 4 HOH A 126 925 925 HOH HOH . D 4 HOH A 127 926 926 HOH HOH . D 4 HOH A 128 927 927 HOH HOH . D 4 HOH A 129 928 928 HOH HOH . D 4 HOH A 130 929 929 HOH HOH . D 4 HOH A 131 930 930 HOH HOH . D 4 HOH A 132 931 931 HOH HOH . D 4 HOH A 133 932 932 HOH HOH . D 4 HOH A 134 933 933 HOH HOH . D 4 HOH A 135 934 934 HOH HOH . D 4 HOH A 136 935 935 HOH HOH . D 4 HOH A 137 936 936 HOH HOH . D 4 HOH A 138 937 937 HOH HOH . D 4 HOH A 139 938 938 HOH HOH . D 4 HOH A 140 939 939 HOH HOH . D 4 HOH A 141 940 940 HOH HOH . D 4 HOH A 142 941 941 HOH HOH . D 4 HOH A 143 942 942 HOH HOH . D 4 HOH A 144 943 943 HOH HOH . D 4 HOH A 145 944 944 HOH HOH . D 4 HOH A 146 945 945 HOH HOH . D 4 HOH A 147 946 946 HOH HOH . D 4 HOH A 148 947 947 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 POP . . . C 3 18.583 57.096 5.82 1 30.64 ? P1 POP 999 A 1 HETATM 2 O O1 POP . . . C 3 19.06 58.025 6.973 1 23.51 ? O1 POP 999 A 1 HETATM 3 O O2 POP . . . C 3 19.076 55.696 6.062 1 14.16 ? O2 POP 999 A 1 HETATM 4 O O3 POP . . . C 3 17.082 57.043 5.843 1 23.31 ? O3 POP 999 A 1 HETATM 5 O O POP . . . C 3 19.05 57.64 4.391 1 20.19 ? O POP 999 A 1 HETATM 6 P P2 POP . . . C 3 20.148 58.674 3.853 1 29.86 ? P2 POP 999 A 1 HETATM 7 O O4 POP . . . C 3 20.319 59.883 4.814 1 16.76 ? O4 POP 999 A 1 HETATM 8 O O5 POP . . . C 3 19.774 59.198 2.499 1 33.57 ? O5 POP 999 A 1 HETATM 9 O O6 POP . . . C 3 21.466 57.96 3.678 1 23.74 ? O6 POP 999 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 1069 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 9 #