data_1MNY
#
_model_server_result.job_id            JB8J9c8fz3f-0B52q7gdTw 
_model_server_result.datetime_utc      '2024-10-10 23:31:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1mny 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":95}' 
#
_entry.id    1MNY 
#
_exptl.entry_id    1MNY 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              644.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL PROPIONATE ESTER HEME' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1MNY 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1MNY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 39 A HIS 39 1_555 B FE HDM . A HDM 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc2 A NE2 HIS 63 A HIS 63 1_555 B FE HDM . A HDM 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
#
_chem_comp.formula           'C36 H36 Fe N4 O4' 
_chem_comp.formula_weight    644.54 
_chem_comp.id                HDM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL PROPIONATE ESTER HEME' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HDM sing 116 n n 
FE NB HDM sing 117 n n 
FE NC HDM sing 118 n n 
FE ND HDM sing 119 n n 
NA C1A HDM sing 120 n y 
NA C4A HDM sing 121 n y 
C1A C2A HDM doub 122 n y 
C1A CHA HDM sing 123 n n 
C2A CAA HDM sing 124 n n 
C2A C3A HDM sing 125 n y 
CAA CBA HDM sing 126 n n 
CAA HP71 HDM sing 127 n n 
CAA HP72 HDM sing 128 n n 
CBA CGA HDM sing 129 n n 
CBA HP73 HDM sing 130 n n 
CBA HP74 HDM sing 131 n n 
CGA O1A HDM doub 132 n n 
CGA O2A HDM sing 133 n n 
O2A CSA HDM sing 134 n n 
CSA HSA1 HDM sing 135 n n 
CSA HSA2 HDM sing 136 n n 
CSA HSA3 HDM sing 137 n n 
C3A CMA HDM sing 138 n n 
C3A C4A HDM doub 139 n y 
CMA HM81 HDM sing 140 n n 
CMA HM82 HDM sing 141 n n 
CMA HM83 HDM sing 142 n n 
C4A CHB HDM sing 143 n n 
CHB C1B HDM doub 144 n n 
CHB HDM HDM sing 145 n n 
C1B NB HDM sing 146 n y 
C1B C2B HDM sing 147 n y 
NB C4B HDM sing 148 n y 
C2B CMB HDM sing 149 n n 
C2B C3B HDM doub 150 n y 
CMB HM11 HDM sing 151 n n 
CMB HM12 HDM sing 152 n n 
CMB HM13 HDM sing 153 n n 
C3B CAB HDM sing 154 n n 
C3B C4B HDM sing 155 n y 
CAB CBB HDM doub 156 n n 
CAB HV2A HDM sing 157 n n 
CBB HV2C HDM sing 158 n n 
CBB HV2T HDM sing 159 n n 
C4B CHC HDM doub 160 n n 
CHC C1C HDM sing 161 n n 
CHC HAM HDM sing 162 n n 
C1C NC HDM sing 163 n y 
C1C C2C HDM doub 164 n y 
NC C4C HDM sing 165 n y 
C2C CMC HDM sing 166 n n 
C2C C3C HDM sing 167 n y 
CMC HM31 HDM sing 168 n n 
CMC HM32 HDM sing 169 n n 
CMC HM33 HDM sing 170 n n 
C3C CAC HDM sing 171 n n 
C3C C4C HDM doub 172 n y 
CAC CBC HDM doub 173 n n 
CAC HV4A HDM sing 174 n n 
CBC HV4C HDM sing 175 n n 
CBC HV4T HDM sing 176 n n 
C4C CHD HDM sing 177 n n 
CHD C1D HDM doub 178 n n 
CHD HBM HDM sing 179 n n 
C1D ND HDM sing 180 n y 
C1D C2D HDM sing 181 n y 
ND C4D HDM sing 182 n y 
C2D CMD HDM sing 183 n n 
C2D C3D HDM doub 184 n y 
CMD HM51 HDM sing 185 n n 
CMD HM52 HDM sing 186 n n 
CMD HM53 HDM sing 187 n n 
C3D C4D HDM sing 188 n y 
C3D CAD HDM sing 189 n n 
C4D CHA HDM doub 190 n n 
CHA HGM HDM sing 191 n n 
CAD CBD HDM sing 192 n n 
CAD HP61 HDM sing 193 n n 
CAD HP62 HDM sing 194 n n 
CBD CGD HDM sing 195 n n 
CBD HP63 HDM sing 196 n n 
CBD HP64 HDM sing 197 n n 
CGD O1D HDM doub 198 n n 
CGD O2D HDM sing 199 n n 
O2D CSD HDM sing 200 n n 
CSD HSD1 HDM sing 201 n n 
CSD HSD2 HDM sing 202 n n 
CSD HSD3 HDM sing 203 n n 
#
_atom_sites.entry_id                     1MNY 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           HDM 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      95 
_pdbx_nonpoly_scheme.auth_seq_num     95 
_pdbx_nonpoly_scheme.pdb_mon_id       HDM 
_pdbx_nonpoly_scheme.auth_mon_id      HDM 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HDM . . . B 2 -9.312 -1.257 4.124 1 0 ? FE HDM 95 A 1 
HETATM 2 N NA HDM . . . B 2 -10.272 -0.699 5.927 1 0 ? NA HDM 95 A 1 
HETATM 3 C C1A HDM . . . B 2 -11.541 -1.056 6.255 1 0 ? C1A HDM 95 A 1 
HETATM 4 C C2A HDM . . . B 2 -11.88 -0.357 7.471 1 0 ? C2A HDM 95 A 1 
HETATM 5 C CAA HDM . . . B 2 -13.248 -0.293 8.105 1 0 ? CAA HDM 95 A 1 
HETATM 6 C CBA HDM . . . B 2 -13.562 -1.51 8.979 1 0 ? CBA HDM 95 A 1 
HETATM 7 C CGA HDM . . . B 2 -15.028 -1.577 9.387 1 0 ? CGA HDM 95 A 1 
HETATM 8 O O1A HDM . . . B 2 -15.722 -0.574 9.228 1 0 ? O1A HDM 95 A 1 
HETATM 9 O O2A HDM . . . B 2 -15.456 -2.668 9.774 1 0 ? O2A HDM 95 A 1 
HETATM 10 C CSA HDM . . . B 2 -16.562 -2.569 10.66 1 0 ? CSA HDM 95 A 1 
HETATM 11 C C3A HDM . . . B 2 -10.744 0.274 7.921 1 0 ? C3A HDM 95 A 1 
HETATM 12 C CMA HDM . . . B 2 -10.634 1.046 9.214 1 0 ? CMA HDM 95 A 1 
HETATM 13 C C4A HDM . . . B 2 -9.73 0.098 6.905 1 0 ? C4A HDM 95 A 1 
HETATM 14 C CHB HDM . . . B 2 -8.465 0.691 6.922 1 0 ? CHB HDM 95 A 1 
HETATM 15 C C1B HDM . . . B 2 -7.577 0.613 5.848 1 0 ? C1B HDM 95 A 1 
HETATM 16 N NB HDM . . . B 2 -7.722 -0.066 4.646 1 0 ? NB HDM 95 A 1 
HETATM 17 C C2B HDM . . . B 2 -6.295 1.275 5.818 1 0 ? C2B HDM 95 A 1 
HETATM 18 C CMB HDM . . . B 2 -5.684 2.153 6.886 1 0 ? CMB HDM 95 A 1 
HETATM 19 C C3B HDM . . . B 2 -5.735 0.965 4.609 1 0 ? C3B HDM 95 A 1 
HETATM 20 C CAB HDM . . . B 2 -4.274 1.144 4.305 1 0 ? CAB HDM 95 A 1 
HETATM 21 C CBB HDM . . . B 2 -3.805 2.317 3.841 1 0 ? CBB HDM 95 A 1 
HETATM 22 C C4B HDM . . . B 2 -6.609 0.096 3.868 1 0 ? C4B HDM 95 A 1 
HETATM 23 C CHC HDM . . . B 2 -6.298 -0.479 2.627 1 0 ? CHC HDM 95 A 1 
HETATM 24 C C1C HDM . . . B 2 -7.153 -1.355 1.941 1 0 ? C1C HDM 95 A 1 
HETATM 25 N NC HDM . . . B 2 -8.407 -1.774 2.333 1 0 ? NC HDM 95 A 1 
HETATM 26 C C2C HDM . . . B 2 -6.852 -2.001 0.678 1 0 ? C2C HDM 95 A 1 
HETATM 27 C CMC HDM . . . B 2 -5.61 -1.841 -0.17 1 0 ? CMC HDM 95 A 1 
HETATM 28 C C3C HDM . . . B 2 -7.943 -2.78 0.37 1 0 ? C3C HDM 95 A 1 
HETATM 29 C CAC HDM . . . B 2 -7.956 -3.927 -0.623 1 0 ? CAC HDM 95 A 1 
HETATM 30 C CBC HDM . . . B 2 -7.421 -3.848 -1.863 1 0 ? CBC HDM 95 A 1 
HETATM 31 C C4C HDM . . . B 2 -8.934 -2.635 1.406 1 0 ? C4C HDM 95 A 1 
HETATM 32 C CHD HDM . . . B 2 -10.161 -3.312 1.432 1 0 ? CHD HDM 95 A 1 
HETATM 33 C C1D HDM . . . B 2 -11.097 -3.18 2.467 1 0 ? C1D HDM 95 A 1 
HETATM 34 N ND HDM . . . B 2 -10.996 -2.416 3.596 1 0 ? ND HDM 95 A 1 
HETATM 35 C C2D HDM . . . B 2 -12.373 -3.859 2.529 1 0 ? C2D HDM 95 A 1 
HETATM 36 C CMD HDM . . . B 2 -12.946 -4.805 1.498 1 0 ? CMD HDM 95 A 1 
HETATM 37 C C3D HDM . . . B 2 -12.991 -3.464 3.696 1 0 ? C3D HDM 95 A 1 
HETATM 38 C C4D HDM . . . B 2 -12.112 -2.535 4.362 1 0 ? C4D HDM 95 A 1 
HETATM 39 C CHA HDM . . . B 2 -12.411 -1.905 5.572 1 0 ? CHA HDM 95 A 1 
HETATM 40 C CAD HDM . . . B 2 -14.355 -3.893 4.189 1 0 ? CAD HDM 95 A 1 
HETATM 41 C CBD HDM . . . B 2 -15.373 -2.742 4.188 1 0 ? CBD HDM 95 A 1 
HETATM 42 C CGD HDM . . . B 2 -16.746 -3.174 3.686 1 0 ? CGD HDM 95 A 1 
HETATM 43 O O1D HDM . . . B 2 -16.811 -3.743 2.6 1 0 ? O1D HDM 95 A 1 
HETATM 44 O O2D HDM . . . B 2 -17.741 -2.799 4.307 1 0 ? O2D HDM 95 A 1 
HETATM 45 C CSD HDM . . . B 2 -18.125 -1.482 3.942 1 0 ? CSD HDM 95 A 1 
HETATM 46 H HP71 HDM . . . B 2 -13.333 0.612 8.709 1 0 ? HP71 HDM 95 A 1 
HETATM 47 H HP72 HDM . . . B 2 -13.99 -0.216 7.309 1 0 ? HP72 HDM 95 A 1 
HETATM 48 H HP73 HDM . . . B 2 -13.315 -2.42 8.433 1 0 ? HP73 HDM 95 A 1 
HETATM 49 H HP74 HDM . . . B 2 -12.954 -1.465 9.882 1 0 ? HP74 HDM 95 A 1 
HETATM 50 H HSA1 HDM . . . B 2 -17.427 -2.135 10.155 1 0 ? HSA1 HDM 95 A 1 
HETATM 51 H HSA2 HDM . . . B 2 -16.828 -3.57 11 1 0 ? HSA2 HDM 95 A 1 
HETATM 52 H HSA3 HDM . . . B 2 -16.3 -1.963 11.529 1 0 ? HSA3 HDM 95 A 1 
HETATM 53 H HM81 HDM . . . B 2 -11.092 0.473 10.019 1 0 ? HM81 HDM 95 A 1 
HETATM 54 H HM82 HDM . . . B 2 -9.598 1.24 9.485 1 0 ? HM82 HDM 95 A 1 
HETATM 55 H HM83 HDM . . . B 2 -11.169 1.988 9.115 1 0 ? HM83 HDM 95 A 1 
HETATM 56 H HDM HDM . . . B 2 -8.185 1.301 7.765 1 0 ? HDM HDM 95 A 1 
HETATM 57 H HM11 HDM . . . B 2 -4.6 2.188 6.768 1 0 ? HM11 HDM 95 A 1 
HETATM 58 H HM12 HDM . . . B 2 -6.08 3.165 6.795 1 0 ? HM12 HDM 95 A 1 
HETATM 59 H HM13 HDM . . . B 2 -5.901 1.762 7.878 1 0 ? HM13 HDM 95 A 1 
HETATM 60 H HV2A HDM . . . B 2 -3.597 0.471 4.797 1 0 ? HV2A HDM 95 A 1 
HETATM 61 H HV2C HDM . . . B 2 -2.738 2.479 3.803 1 0 ? HV2C HDM 95 A 1 
HETATM 62 H HV2T HDM . . . B 2 -4.476 3.023 3.373 1 0 ? HV2T HDM 95 A 1 
HETATM 63 H HAM HDM . . . B 2 -5.345 -0.229 2.191 1 0 ? HAM HDM 95 A 1 
HETATM 64 H HM31 HDM . . . B 2 -4.828 -1.287 0.342 1 0 ? HM31 HDM 95 A 1 
HETATM 65 H HM32 HDM . . . B 2 -5.221 -2.825 -0.43 1 0 ? HM32 HDM 95 A 1 
HETATM 66 H HM33 HDM . . . B 2 -5.869 -1.312 -1.086 1 0 ? HM33 HDM 95 A 1 
HETATM 67 H HV4A HDM . . . B 2 -8.287 -4.897 -0.285 1 0 ? HV4A HDM 95 A 1 
HETATM 68 H HV4C HDM . . . B 2 -7.361 -4.739 -2.472 1 0 ? HV4C HDM 95 A 1 
HETATM 69 H HV4T HDM . . . B 2 -7.089 -2.907 -2.271 1 0 ? HV4T HDM 95 A 1 
HETATM 70 H HBM HDM . . . B 2 -10.396 -3.947 0.593 1 0 ? HBM HDM 95 A 1 
HETATM 71 H HM51 HDM . . . B 2 -12.16 -5.264 0.901 1 0 ? HM51 HDM 95 A 1 
HETATM 72 H HM52 HDM . . . B 2 -13.496 -5.611 1.98 1 0 ? HM52 HDM 95 A 1 
HETATM 73 H HM53 HDM . . . B 2 -13.62 -4.254 0.841 1 0 ? HM53 HDM 95 A 1 
HETATM 74 H HGM HDM . . . B 2 -13.36 -2.116 6.031 1 0 ? HGM HDM 95 A 1 
HETATM 75 H HP61 HDM . . . B 2 -14.722 -4.704 3.564 1 0 ? HP61 HDM 95 A 1 
HETATM 76 H HP62 HDM . . . B 2 -14.258 -4.293 5.2 1 0 ? HP62 HDM 95 A 1 
HETATM 77 H HP63 HDM . . . B 2 -15.474 -2.349 5.2 1 0 ? HP63 HDM 95 A 1 
HETATM 78 H HP64 HDM . . . B 2 -15.014 -1.942 3.539 1 0 ? HP64 HDM 95 A 1 
HETATM 79 H HSD1 HDM . . . B 2 -17.355 -0.761 4.224 1 0 ? HSD1 HDM 95 A 1 
HETATM 80 H HSD2 HDM . . . B 2 -19.045 -1.225 4.466 1 0 ? HSD2 HDM 95 A 1 
HETATM 81 H HSD3 HDM . . . B 2 -18.309 -1.416 2.866 1 0 ? HSD3 HDM 95 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           81 
#