data_1MOK # _model_server_result.job_id ia2WVsbPxcjyFNqUfqzARQ _model_server_result.datetime_utc '2024-10-12 10:19:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":524}' # _entry.id 1MOK # _exptl.entry_id 1MOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 72 _cell.angle_beta 73.4 _cell.angle_gamma 69.81 _cell.entry_id 1MOK _cell.length_a 65.6 _cell.length_b 87.5 _cell.length_c 100.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F 1 1 C,D,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 82 1_555 A SG CYS 87 A CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 B SG CYS 82 B CYS 82 1_555 B SG CYS 87 B CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 C SG CYS 82 C CYS 82 1_555 C SG CYS 87 C CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 D SG CYS 82 D CYS 82 1_555 D SG CYS 87 D CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MOK _atom_sites.fract_transf_matrix[1][1] 0.015244 _atom_sites.fract_transf_matrix[1][2] -0.005606 _atom_sites.fract_transf_matrix[1][3] -0.003325 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012177 _atom_sites.fract_transf_matrix[2][3] -0.00293 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010658 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 524 479 FAD FAD . F 2 FAD B 1 524 480 FAD FAD . G 2 FAD C 1 524 481 FAD FAD . H 2 FAD D 1 524 482 FAD FAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . F 2 27.219 -28.045 26.492 1 25.79 ? PA FAD 524 B 1 HETATM 2 O O1A FAD . . . F 2 27.982 -28.294 27.753 1 27.29 ? O1A FAD 524 B 1 HETATM 3 O O2A FAD . . . F 2 27.073 -26.603 26.096 1 25.04 ? O2A FAD 524 B 1 HETATM 4 O O5B FAD . . . F 2 25.757 -28.612 26.577 1 24.63 ? O5B FAD 524 B 1 HETATM 5 C C5B FAD . . . F 2 25.455 -29.995 26.637 1 27.27 ? C5B FAD 524 B 1 HETATM 6 C C4B FAD . . . F 2 23.949 -30.058 26.751 1 29.58 ? C4B FAD 524 B 1 HETATM 7 O O4B FAD . . . F 2 23.455 -31.431 26.799 1 30.5 ? O4B FAD 524 B 1 HETATM 8 C C3B FAD . . . F 2 23.339 -29.372 28.008 1 30.87 ? C3B FAD 524 B 1 HETATM 9 O O3B FAD . . . F 2 22.218 -28.595 27.588 1 30.73 ? O3B FAD 524 B 1 HETATM 10 C C2B FAD . . . F 2 23.01 -30.504 28.882 1 32.02 ? C2B FAD 524 B 1 HETATM 11 O O2B FAD . . . F 2 22.046 -30.352 29.888 1 34.56 ? O2B FAD 524 B 1 HETATM 12 C C1B FAD . . . F 2 22.579 -31.595 27.911 1 32.15 ? C1B FAD 524 B 1 HETATM 13 N N9A FAD . . . F 2 22.683 -32.937 28.392 1 31.69 ? N9A FAD 524 B 1 HETATM 14 C C8A FAD . . . F 2 23.795 -33.664 28.891 1 31.86 ? C8A FAD 524 B 1 HETATM 15 N N7A FAD . . . F 2 23.502 -34.888 29.25 1 32.73 ? N7A FAD 524 B 1 HETATM 16 C C5A FAD . . . F 2 22.134 -35.027 28.994 1 32.66 ? C5A FAD 524 B 1 HETATM 17 C C6A FAD . . . F 2 21.212 -36.087 29.162 1 34.21 ? C6A FAD 524 B 1 HETATM 18 N N6A FAD . . . F 2 21.564 -37.277 29.655 1 36.82 ? N6A FAD 524 B 1 HETATM 19 N N1A FAD . . . F 2 19.877 -35.871 28.791 1 35.56 ? N1A FAD 524 B 1 HETATM 20 C C2A FAD . . . F 2 19.48 -34.67 28.284 1 33.53 ? C2A FAD 524 B 1 HETATM 21 N N3A FAD . . . F 2 20.34 -33.565 28.087 1 31.17 ? N3A FAD 524 B 1 HETATM 22 C C4A FAD . . . F 2 21.673 -33.902 28.501 1 31.94 ? C4A FAD 524 B 1 HETATM 23 N N1 FAD . . . F 2 34.544 -22.252 25.38 1 33.16 ? N1 FAD 524 B 1 HETATM 24 C C2 FAD . . . F 2 34.765 -21.059 24.685 1 32.08 ? C2 FAD 524 B 1 HETATM 25 O O2 FAD . . . F 2 34.664 -20.997 23.441 1 32.09 ? O2 FAD 524 B 1 HETATM 26 N N3 FAD . . . F 2 35.106 -19.918 25.41 1 31.56 ? N3 FAD 524 B 1 HETATM 27 C C4 FAD . . . F 2 35.251 -19.848 26.822 1 32.08 ? C4 FAD 524 B 1 HETATM 28 O O4 FAD . . . F 2 35.567 -18.754 27.371 1 33.44 ? O4 FAD 524 B 1 HETATM 29 C C4X FAD . . . F 2 35.027 -21.021 27.489 1 32.08 ? C4X FAD 524 B 1 HETATM 30 N N5 FAD . . . F 2 35.169 -20.968 28.931 1 30.21 ? N5 FAD 524 B 1 HETATM 31 C C5X FAD . . . F 2 34.942 -22.183 29.638 1 30.6 ? C5X FAD 524 B 1 HETATM 32 C C6 FAD . . . F 2 35.063 -22.21 31.047 1 31.53 ? C6 FAD 524 B 1 HETATM 33 C C7 FAD . . . F 2 34.856 -23.386 31.832 1 29.53 ? C7 FAD 524 B 1 HETATM 34 C C7M FAD . . . F 2 35.008 -23.316 33.352 1 31.09 ? C7M FAD 524 B 1 HETATM 35 C C8 FAD . . . F 2 34.512 -24.593 31.151 1 29.34 ? C8 FAD 524 B 1 HETATM 36 C C8M FAD . . . F 2 34.279 -25.896 31.879 1 28.82 ? C8M FAD 524 B 1 HETATM 37 C C9 FAD . . . F 2 34.373 -24.626 29.758 1 29.17 ? C9 FAD 524 B 1 HETATM 38 C C9A FAD . . . F 2 34.575 -23.464 28.973 1 28.87 ? C9A FAD 524 B 1 HETATM 39 N N10 FAD . . . F 2 34.456 -23.397 27.475 1 28.62 ? N10 FAD 524 B 1 HETATM 40 C C10 FAD . . . F 2 34.676 -22.218 26.766 1 31.64 ? C10 FAD 524 B 1 HETATM 41 C C1' FAD . . . F 2 34.095 -24.62 26.833 1 25.76 ? C1' FAD 524 B 1 HETATM 42 C C2' FAD . . . F 2 32.708 -24.624 26.319 1 23.08 ? C2' FAD 524 B 1 HETATM 43 O O2' FAD . . . F 2 31.92 -24.409 27.498 1 25.63 ? O2' FAD 524 B 1 HETATM 44 C C3' FAD . . . F 2 32.22 -25.893 25.734 1 22.03 ? C3' FAD 524 B 1 HETATM 45 O O3' FAD . . . F 2 33.074 -26.385 24.682 1 20.74 ? O3' FAD 524 B 1 HETATM 46 C C4' FAD . . . F 2 30.844 -25.852 25.082 1 20.99 ? C4' FAD 524 B 1 HETATM 47 O O4' FAD . . . F 2 29.932 -25.347 26.117 1 21.66 ? O4' FAD 524 B 1 HETATM 48 C C5' FAD . . . F 2 30.366 -27.181 24.692 1 20.73 ? C5' FAD 524 B 1 HETATM 49 O O5' FAD . . . F 2 29.106 -27.11 24.095 1 18.18 ? O5' FAD 524 B 1 HETATM 50 P P FAD . . . F 2 28.324 -28.411 23.817 1 23.95 ? P FAD 524 B 1 HETATM 51 O O1P FAD . . . F 2 27.055 -28.071 23.139 1 24.21 ? O1P FAD 524 B 1 HETATM 52 O O2P FAD . . . F 2 29.22 -29.428 23.21 1 25.14 ? O2P FAD 524 B 1 HETATM 53 O O3P FAD . . . F 2 28.041 -28.806 25.349 1 26.26 ? O3P FAD 524 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #