data_1MQ5 # _model_server_result.job_id Mq2l0wL6KFDN1PYDZmpM9A _model_server_result.datetime_utc '2024-12-04 20:25:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mq5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 1MQ5 # _exptl.entry_id 1MQ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MQ5 _cell.length_a 56.363 _cell.length_b 72.018 _cell.length_c 78.922 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MQ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 46 L CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 B SG CYS 3 L CYS 89 1_555 B SG CYS 14 L CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 B SG CYS 10 L CYS 96 1_555 B SG CYS 23 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf8 B SG CYS 25 L CYS 111 1_555 B SG CYS 38 L CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A OD2 ASP 56 A ASP 70 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc2 A O ASN 58 A ASN 72 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc3 A O GLN 61 A GLN 75 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.782 ? metalc ? metalc4 A OE2 GLU 63 A GLU 77 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc5 A OE2 GLU 66 A GLU 80 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc6 C CA CA . A CA 501 1_555 H O HOH . A HOH 721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MQ5 _atom_sites.fract_transf_matrix[1][1] 0.017742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013885 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012671 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 501 501 CA CA . D 4 XLC A 1 500 500 XLC LIG . E 5 GOL A 1 502 502 GOL GOL . F 5 GOL A 1 503 503 GOL GOL . G 5 GOL L 1 504 504 GOL GOL . H 6 HOH A 1 600 600 HOH HOH . H 6 HOH A 2 601 601 HOH HOH . H 6 HOH A 3 602 602 HOH HOH . H 6 HOH A 4 603 603 HOH HOH . H 6 HOH A 5 604 604 HOH HOH . H 6 HOH A 6 605 605 HOH HOH . H 6 HOH A 7 606 606 HOH HOH . H 6 HOH A 8 607 607 HOH HOH . H 6 HOH A 9 608 608 HOH HOH . H 6 HOH A 10 610 610 HOH HOH . H 6 HOH A 11 611 611 HOH HOH . H 6 HOH A 12 612 612 HOH HOH . H 6 HOH A 13 613 613 HOH HOH . H 6 HOH A 14 614 614 HOH HOH . H 6 HOH A 15 615 615 HOH HOH . H 6 HOH A 16 616 616 HOH HOH . H 6 HOH A 17 618 618 HOH HOH . H 6 HOH A 18 619 619 HOH HOH . H 6 HOH A 19 620 620 HOH HOH . H 6 HOH A 20 621 621 HOH HOH . H 6 HOH A 21 622 622 HOH HOH . H 6 HOH A 22 623 623 HOH HOH . H 6 HOH A 23 625 625 HOH HOH . H 6 HOH A 24 626 626 HOH HOH . H 6 HOH A 25 628 628 HOH HOH . H 6 HOH A 26 630 630 HOH HOH . H 6 HOH A 27 631 631 HOH HOH . H 6 HOH A 28 633 633 HOH HOH . H 6 HOH A 29 635 635 HOH HOH . H 6 HOH A 30 636 636 HOH HOH . H 6 HOH A 31 637 637 HOH HOH . H 6 HOH A 32 639 639 HOH HOH . H 6 HOH A 33 640 640 HOH HOH . H 6 HOH A 34 641 641 HOH HOH . H 6 HOH A 35 642 642 HOH HOH . H 6 HOH A 36 643 643 HOH HOH . H 6 HOH A 37 644 644 HOH HOH . H 6 HOH A 38 645 645 HOH HOH . H 6 HOH A 39 646 646 HOH HOH . H 6 HOH A 40 647 647 HOH HOH . H 6 HOH A 41 648 648 HOH HOH . H 6 HOH A 42 649 649 HOH HOH . H 6 HOH A 43 650 650 HOH HOH . H 6 HOH A 44 652 652 HOH HOH . H 6 HOH A 45 654 654 HOH HOH . H 6 HOH A 46 655 655 HOH HOH . H 6 HOH A 47 657 657 HOH HOH . H 6 HOH A 48 658 658 HOH HOH . H 6 HOH A 49 659 659 HOH HOH . H 6 HOH A 50 661 661 HOH HOH . H 6 HOH A 51 662 662 HOH HOH . H 6 HOH A 52 663 663 HOH HOH . H 6 HOH A 53 664 664 HOH HOH . H 6 HOH A 54 666 666 HOH HOH . H 6 HOH A 55 667 667 HOH HOH . H 6 HOH A 56 668 668 HOH HOH . H 6 HOH A 57 669 669 HOH HOH . H 6 HOH A 58 673 673 HOH HOH . H 6 HOH A 59 674 674 HOH HOH . H 6 HOH A 60 675 675 HOH HOH . H 6 HOH A 61 676 676 HOH HOH . H 6 HOH A 62 678 678 HOH HOH . H 6 HOH A 63 679 679 HOH HOH . H 6 HOH A 64 680 680 HOH HOH . H 6 HOH A 65 681 681 HOH HOH . H 6 HOH A 66 683 683 HOH HOH . H 6 HOH A 67 684 684 HOH HOH . H 6 HOH A 68 685 685 HOH HOH . H 6 HOH A 69 686 686 HOH HOH . H 6 HOH A 70 687 687 HOH HOH . H 6 HOH A 71 688 688 HOH HOH . H 6 HOH A 72 689 689 HOH HOH . H 6 HOH A 73 691 691 HOH HOH . H 6 HOH A 74 692 692 HOH HOH . H 6 HOH A 75 694 694 HOH HOH . H 6 HOH A 76 695 695 HOH HOH . H 6 HOH A 77 696 696 HOH HOH . H 6 HOH A 78 697 697 HOH HOH . H 6 HOH A 79 698 698 HOH HOH . H 6 HOH A 80 699 699 HOH HOH . H 6 HOH A 81 700 700 HOH HOH . H 6 HOH A 82 701 701 HOH HOH . H 6 HOH A 83 703 703 HOH HOH . H 6 HOH A 84 704 704 HOH HOH . H 6 HOH A 85 705 705 HOH HOH . H 6 HOH A 86 711 711 HOH HOH . H 6 HOH A 87 712 712 HOH HOH . H 6 HOH A 88 713 713 HOH HOH . H 6 HOH A 89 714 714 HOH HOH . H 6 HOH A 90 715 715 HOH HOH . H 6 HOH A 91 717 717 HOH HOH . H 6 HOH A 92 718 718 HOH HOH . H 6 HOH A 93 719 719 HOH HOH . H 6 HOH A 94 720 720 HOH HOH . H 6 HOH A 95 721 721 HOH HOH . H 6 HOH A 96 723 723 HOH HOH . H 6 HOH A 97 724 724 HOH HOH . H 6 HOH A 98 725 725 HOH HOH . H 6 HOH A 99 726 726 HOH HOH . H 6 HOH A 100 727 727 HOH HOH . H 6 HOH A 101 729 729 HOH HOH . H 6 HOH A 102 730 730 HOH HOH . H 6 HOH A 103 731 731 HOH HOH . H 6 HOH A 104 732 732 HOH HOH . H 6 HOH A 105 733 733 HOH HOH . H 6 HOH A 106 736 736 HOH HOH . H 6 HOH A 107 737 737 HOH HOH . H 6 HOH A 108 738 738 HOH HOH . H 6 HOH A 109 739 739 HOH HOH . H 6 HOH A 110 741 741 HOH HOH . H 6 HOH A 111 743 743 HOH HOH . H 6 HOH A 112 744 744 HOH HOH . H 6 HOH A 113 746 746 HOH HOH . H 6 HOH A 114 747 747 HOH HOH . H 6 HOH A 115 748 748 HOH HOH . H 6 HOH A 116 750 750 HOH HOH . H 6 HOH A 117 751 751 HOH HOH . H 6 HOH A 118 752 752 HOH HOH . H 6 HOH A 119 753 753 HOH HOH . H 6 HOH A 120 756 756 HOH HOH . H 6 HOH A 121 757 757 HOH HOH . H 6 HOH A 122 758 758 HOH HOH . H 6 HOH A 123 759 759 HOH HOH . H 6 HOH A 124 760 760 HOH HOH . H 6 HOH A 125 761 761 HOH HOH . H 6 HOH A 126 762 762 HOH HOH . H 6 HOH A 127 763 763 HOH HOH . H 6 HOH A 128 766 766 HOH HOH . H 6 HOH A 129 767 767 HOH HOH . H 6 HOH A 130 770 770 HOH HOH . H 6 HOH A 131 771 771 HOH HOH . I 6 HOH L 1 609 609 HOH HOH . I 6 HOH L 2 617 617 HOH HOH . I 6 HOH L 3 624 624 HOH HOH . I 6 HOH L 4 627 627 HOH HOH . I 6 HOH L 5 629 629 HOH HOH . I 6 HOH L 6 632 632 HOH HOH . I 6 HOH L 7 634 634 HOH HOH . I 6 HOH L 8 638 638 HOH HOH . I 6 HOH L 9 651 651 HOH HOH . I 6 HOH L 10 653 653 HOH HOH . I 6 HOH L 11 656 656 HOH HOH . I 6 HOH L 12 660 660 HOH HOH . I 6 HOH L 13 665 665 HOH HOH . I 6 HOH L 14 670 670 HOH HOH . I 6 HOH L 15 671 671 HOH HOH . I 6 HOH L 16 672 672 HOH HOH . I 6 HOH L 17 677 677 HOH HOH . I 6 HOH L 18 682 682 HOH HOH . I 6 HOH L 19 690 690 HOH HOH . I 6 HOH L 20 693 693 HOH HOH . I 6 HOH L 21 702 702 HOH HOH . I 6 HOH L 22 706 706 HOH HOH . I 6 HOH L 23 707 707 HOH HOH . I 6 HOH L 24 708 708 HOH HOH . I 6 HOH L 25 709 709 HOH HOH . I 6 HOH L 26 710 710 HOH HOH . I 6 HOH L 27 716 716 HOH HOH . I 6 HOH L 28 722 722 HOH HOH . I 6 HOH L 29 728 728 HOH HOH . I 6 HOH L 30 734 734 HOH HOH . I 6 HOH L 31 735 735 HOH HOH . I 6 HOH L 32 740 740 HOH HOH . I 6 HOH L 33 742 742 HOH HOH . I 6 HOH L 34 745 745 HOH HOH . I 6 HOH L 35 749 749 HOH HOH . I 6 HOH L 36 754 754 HOH HOH . I 6 HOH L 37 755 755 HOH HOH . I 6 HOH L 38 764 764 HOH HOH . I 6 HOH L 39 765 765 HOH HOH . I 6 HOH L 40 768 768 HOH HOH . I 6 HOH L 41 769 769 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.227 _atom_site.Cartn_y 31.387 _atom_site.Cartn_z 29.136 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #