data_1MQB
#
_model_server_result.job_id            FSFuigvxRBIqMSz8PpcnUg 
_model_server_result.datetime_utc      '2024-11-23 23:14:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1mqb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1001}' 
#
_entry.id    1MQB 
#
_exptl.entry_id    1MQB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1MQB 
_cell.length_a            72.127 
_cell.length_b            72.127 
_cell.length_c            241.623 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1MQB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     1MQB 
_atom_sites.fract_transf_matrix[1][1]    0.013864 
_atom_sites.fract_transf_matrix[1][2]    0.008005 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016009 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ANP A 1 1000 1000 ANP ANP . 
D 2 ANP B 1 1001 1001 ANP ANP . 
E 3 HOH A 1 302 302 HOH HOH . 
E 3 HOH A 2 304 304 HOH HOH . 
E 3 HOH A 3 306 306 HOH HOH . 
E 3 HOH A 4 308 308 HOH HOH . 
E 3 HOH A 5 309 309 HOH HOH . 
E 3 HOH A 6 311 311 HOH HOH . 
E 3 HOH A 7 312 312 HOH HOH . 
E 3 HOH A 8 314 314 HOH HOH . 
E 3 HOH A 9 315 315 HOH HOH . 
E 3 HOH A 10 316 316 HOH HOH . 
E 3 HOH A 11 317 317 HOH HOH . 
E 3 HOH A 12 318 318 HOH HOH . 
E 3 HOH A 13 319 319 HOH HOH . 
E 3 HOH A 14 320 320 HOH HOH . 
E 3 HOH A 15 322 322 HOH HOH . 
E 3 HOH A 16 324 324 HOH HOH . 
E 3 HOH A 17 327 327 HOH HOH . 
E 3 HOH A 18 328 328 HOH HOH . 
E 3 HOH A 19 329 329 HOH HOH . 
E 3 HOH A 20 332 332 HOH HOH . 
E 3 HOH A 21 333 333 HOH HOH . 
E 3 HOH A 22 334 334 HOH HOH . 
E 3 HOH A 23 335 335 HOH HOH . 
E 3 HOH A 24 337 337 HOH HOH . 
E 3 HOH A 25 343 343 HOH HOH . 
E 3 HOH A 26 345 345 HOH HOH . 
E 3 HOH A 27 350 350 HOH HOH . 
E 3 HOH A 28 351 351 HOH HOH . 
E 3 HOH A 29 353 353 HOH HOH . 
E 3 HOH A 30 354 354 HOH HOH . 
E 3 HOH A 31 355 355 HOH HOH . 
E 3 HOH A 32 357 357 HOH HOH . 
E 3 HOH A 33 358 358 HOH HOH . 
E 3 HOH A 34 359 359 HOH HOH . 
E 3 HOH A 35 360 360 HOH HOH . 
E 3 HOH A 36 363 363 HOH HOH . 
E 3 HOH A 37 364 364 HOH HOH . 
E 3 HOH A 38 365 365 HOH HOH . 
E 3 HOH A 39 366 366 HOH HOH . 
F 3 HOH B 1 301 301 HOH HOH . 
F 3 HOH B 2 303 303 HOH HOH . 
F 3 HOH B 3 305 305 HOH HOH . 
F 3 HOH B 4 307 307 HOH HOH . 
F 3 HOH B 5 310 310 HOH HOH . 
F 3 HOH B 6 313 313 HOH HOH . 
F 3 HOH B 7 321 321 HOH HOH . 
F 3 HOH B 8 323 323 HOH HOH . 
F 3 HOH B 9 325 325 HOH HOH . 
F 3 HOH B 10 330 330 HOH HOH . 
F 3 HOH B 11 331 331 HOH HOH . 
F 3 HOH B 12 336 336 HOH HOH . 
F 3 HOH B 13 338 338 HOH HOH . 
F 3 HOH B 14 339 339 HOH HOH . 
F 3 HOH B 15 340 340 HOH HOH . 
F 3 HOH B 16 341 341 HOH HOH . 
F 3 HOH B 17 342 342 HOH HOH . 
F 3 HOH B 18 344 344 HOH HOH . 
F 3 HOH B 19 346 346 HOH HOH . 
F 3 HOH B 20 347 347 HOH HOH . 
F 3 HOH B 21 348 348 HOH HOH . 
F 3 HOH B 22 349 349 HOH HOH . 
F 3 HOH B 23 352 352 HOH HOH . 
F 3 HOH B 24 356 356 HOH HOH . 
F 3 HOH B 25 361 361 HOH HOH . 
F 3 HOH B 26 362 362 HOH HOH . 
F 3 HOH B 27 367 367 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . D 2 45.528 0.458 84.658 1 99.99 ? PG ANP 1001 B 1 
HETATM 2 O O1G ANP . . . D 2 44.662 -0.497 83.901 1 99.82 ? O1G ANP 1001 B 1 
HETATM 3 O O2G ANP . . . D 2 44.938 0.676 86.068 1 98.09 ? O2G ANP 1001 B 1 
HETATM 4 O O3G ANP . . . D 2 45.505 1.847 83.968 1 98.67 ? O3G ANP 1001 B 1 
HETATM 5 P PB ANP . . . D 2 47.711 -1.645 84.624 1 96.17 ? PB ANP 1001 B 1 
HETATM 6 O O1B ANP . . . D 2 47.619 -2.062 83.2 1 95.72 ? O1B ANP 1001 B 1 
HETATM 7 O O2B ANP . . . D 2 49.2 -1.758 85.058 1 94.52 ? O2B ANP 1001 B 1 
HETATM 8 N N3B ANP . . . D 2 47.078 -0.12 84.775 1 97.52 ? N3B ANP 1001 B 1 
HETATM 9 P PA ANP . . . D 2 45.916 -2.377 86.836 1 85.17 ? PA ANP 1001 B 1 
HETATM 10 O O1A ANP . . . D 2 46.192 -3.364 87.907 1 86.13 ? O1A ANP 1001 B 1 
HETATM 11 O O2A ANP . . . D 2 46.04 -0.985 87.506 1 83.77 ? O2A ANP 1001 B 1 
HETATM 12 O O3A ANP . . . D 2 46.856 -2.691 85.542 1 90.39 ? O3A ANP 1001 B 1 
HETATM 13 O O5' ANP . . . D 2 44.479 -2.596 86.125 1 80.13 ? O5' ANP 1001 B 1 
HETATM 14 C C5' ANP . . . D 2 44.163 -3.687 85.273 1 75.29 ? C5' ANP 1001 B 1 
HETATM 15 C C4' ANP . . . D 2 42.667 -4.015 85.371 1 72.62 ? C4' ANP 1001 B 1 
HETATM 16 O O4' ANP . . . D 2 42.413 -5.319 85.913 1 68.99 ? O4' ANP 1001 B 1 
HETATM 17 C C3' ANP . . . D 2 41.922 -3.009 86.267 1 69.63 ? C3' ANP 1001 B 1 
HETATM 18 O O3' ANP . . . D 2 41.409 -1.915 85.541 1 69.92 ? O3' ANP 1001 B 1 
HETATM 19 C C2' ANP . . . D 2 40.855 -3.857 86.923 1 67.14 ? C2' ANP 1001 B 1 
HETATM 20 O O2' ANP . . . D 2 39.704 -3.901 86.12 1 66.15 ? O2' ANP 1001 B 1 
HETATM 21 C C1' ANP . . . D 2 41.536 -5.219 87.041 1 65.04 ? C1' ANP 1001 B 1 
HETATM 22 N N9 ANP . . . D 2 42.259 -5.275 88.35 1 59.88 ? N9 ANP 1001 B 1 
HETATM 23 C C8 ANP . . . D 2 43.57 -4.903 88.601 1 57.69 ? C8 ANP 1001 B 1 
HETATM 24 N N7 ANP . . . D 2 43.848 -5.103 89.919 1 55.86 ? N7 ANP 1001 B 1 
HETATM 25 C C5 ANP . . . D 2 42.732 -5.586 90.544 1 54.09 ? C5 ANP 1001 B 1 
HETATM 26 C C6 ANP . . . D 2 42.451 -5.947 91.872 1 50.67 ? C6 ANP 1001 B 1 
HETATM 27 N N6 ANP . . . D 2 43.246 -5.645 92.927 1 45.34 ? N6 ANP 1001 B 1 
HETATM 28 N N1 ANP . . . D 2 41.194 -6.417 92.133 1 49.32 ? N1 ANP 1001 B 1 
HETATM 29 C C2 ANP . . . D 2 40.207 -6.506 91.174 1 51.97 ? C2 ANP 1001 B 1 
HETATM 30 N N3 ANP . . . D 2 40.478 -6.14 89.879 1 52.25 ? N3 ANP 1001 B 1 
HETATM 31 C C4 ANP . . . D 2 41.727 -5.697 89.561 1 56.09 ? C4 ANP 1001 B 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#