data_1MQE # _model_server_result.job_id ETN_1jLf2Vozysn8-CTs3A _model_server_result.datetime_utc '2024-10-18 23:35:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mqe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 1MQE # _exptl.entry_id 1MQE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 157.25 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GADOLINIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1MQE _cell.length_a 64.052 _cell.length_b 64.052 _cell.length_c 182.212 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MQE _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 30.368667 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 93 A GLU 93 1_555 C GD GD3 . A GD3 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc2 B O1A APR . A APR 208 1_555 C GD GD3 . A GD3 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc3 C GD GD3 . A GD3 301 1_555 D O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? metalc ? metalc4 C GD GD3 . A GD3 301 1_555 D O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? # _chem_comp.formula 'Gd 3' _chem_comp.formula_weight 157.25 _chem_comp.id GD3 _chem_comp.mon_nstd_flag . _chem_comp.name 'GADOLINIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MQE _atom_sites.fract_transf_matrix[1][1] 0.015612 _atom_sites.fract_transf_matrix[1][2] 0.009014 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005488 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 APR A 1 208 201 APR APR . C 3 GD3 A 1 301 301 GD3 GD3 . D 4 HOH A 1 302 2 HOH HOH . D 4 HOH A 2 303 3 HOH HOH . D 4 HOH A 3 304 5 HOH HOH . D 4 HOH A 4 305 6 HOH HOH . D 4 HOH A 5 306 7 HOH HOH . D 4 HOH A 6 307 8 HOH HOH . D 4 HOH A 7 308 9 HOH HOH . D 4 HOH A 8 309 10 HOH HOH . D 4 HOH A 9 310 11 HOH HOH . D 4 HOH A 10 311 12 HOH HOH . D 4 HOH A 11 312 13 HOH HOH . D 4 HOH A 12 313 15 HOH HOH . D 4 HOH A 13 314 16 HOH HOH . D 4 HOH A 14 315 17 HOH HOH . D 4 HOH A 15 316 18 HOH HOH . D 4 HOH A 16 317 19 HOH HOH . D 4 HOH A 17 318 20 HOH HOH . D 4 HOH A 18 319 21 HOH HOH . D 4 HOH A 19 320 22 HOH HOH . D 4 HOH A 20 321 23 HOH HOH . D 4 HOH A 21 322 24 HOH HOH . D 4 HOH A 22 323 25 HOH HOH . D 4 HOH A 23 324 26 HOH HOH . D 4 HOH A 24 325 27 HOH HOH . D 4 HOH A 25 326 29 HOH HOH . D 4 HOH A 26 327 30 HOH HOH . D 4 HOH A 27 328 31 HOH HOH . D 4 HOH A 28 329 32 HOH HOH . D 4 HOH A 29 330 35 HOH HOH . D 4 HOH A 30 331 36 HOH HOH . D 4 HOH A 31 332 38 HOH HOH . D 4 HOH A 32 333 39 HOH HOH . D 4 HOH A 33 334 41 HOH HOH . D 4 HOH A 34 335 43 HOH HOH . D 4 HOH A 35 336 44 HOH HOH . D 4 HOH A 36 337 46 HOH HOH . D 4 HOH A 37 338 47 HOH HOH . D 4 HOH A 38 339 48 HOH HOH . D 4 HOH A 39 340 50 HOH HOH . D 4 HOH A 40 341 51 HOH HOH . D 4 HOH A 41 342 53 HOH HOH . D 4 HOH A 42 343 55 HOH HOH . D 4 HOH A 43 344 57 HOH HOH . D 4 HOH A 44 345 58 HOH HOH . D 4 HOH A 45 346 63 HOH HOH . D 4 HOH A 46 347 64 HOH HOH . D 4 HOH A 47 348 65 HOH HOH . D 4 HOH A 48 349 66 HOH HOH . D 4 HOH A 49 350 67 HOH HOH . D 4 HOH A 50 351 68 HOH HOH . D 4 HOH A 51 352 71 HOH HOH . D 4 HOH A 52 353 75 HOH HOH . D 4 HOH A 53 354 77 HOH HOH . D 4 HOH A 54 355 79 HOH HOH . D 4 HOH A 55 356 80 HOH HOH . D 4 HOH A 56 357 82 HOH HOH . D 4 HOH A 57 358 83 HOH HOH . D 4 HOH A 58 359 88 HOH HOH . D 4 HOH A 59 360 89 HOH HOH . D 4 HOH A 60 361 90 HOH HOH . D 4 HOH A 61 362 93 HOH HOH . D 4 HOH A 62 363 94 HOH HOH . D 4 HOH A 63 364 97 HOH HOH . D 4 HOH A 64 365 102 HOH HOH . D 4 HOH A 65 366 103 HOH HOH . D 4 HOH A 66 367 107 HOH HOH . D 4 HOH A 67 368 112 HOH HOH . D 4 HOH A 68 369 114 HOH HOH . D 4 HOH A 69 370 115 HOH HOH . D 4 HOH A 70 371 118 HOH HOH . D 4 HOH A 71 372 123 HOH HOH . D 4 HOH A 72 373 124 HOH HOH . D 4 HOH A 73 374 127 HOH HOH . D 4 HOH A 74 375 130 HOH HOH . D 4 HOH A 75 376 131 HOH HOH . D 4 HOH A 76 377 132 HOH HOH . D 4 HOH A 77 378 135 HOH HOH . D 4 HOH A 78 379 137 HOH HOH . D 4 HOH A 79 380 138 HOH HOH . D 4 HOH A 80 381 139 HOH HOH . D 4 HOH A 81 382 141 HOH HOH . D 4 HOH A 82 383 142 HOH HOH . D 4 HOH A 83 384 143 HOH HOH . D 4 HOH A 84 385 144 HOH HOH . D 4 HOH A 85 386 145 HOH HOH . D 4 HOH A 86 387 146 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol GD _atom_site.label_atom_id GD _atom_site.label_comp_id GD3 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 21.367 _atom_site.Cartn_y 22.914 _atom_site.Cartn_z -0.182 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 69.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id GD _atom_site.auth_comp_id GD3 _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #