data_1MR8 # _model_server_result.job_id kqt8LuguhrGapLcdlgy1Qg _model_server_result.datetime_utc '2024-12-24 02:14:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mr8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 1MR8 # _exptl.entry_id 1MR8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1MR8 _cell.length_a 52.5 _cell.length_b 52.5 _cell.length_c 128.6 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MR8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA,PQS tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 85.733333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 20 A SER 20 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc2 A O LYS 23 A LYS 23 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc3 A O ASN 25 A ASN 25 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc4 A O ALA 28 A ALA 28 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc5 A OD1 ASP 59 A ASP 59 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc6 A OD1 ASN 61 A ASN 61 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc7 A OD1 ASP 63 A ASP 63 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc8 A O ALA 65 A ALA 65 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc9 A OE1 GLU 70 A GLU 70 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc10 A OE2 GLU 70 A GLU 70 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc11 C CA CA . A CA 101 1_555 G O HOH . A HOH 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc12 D CA CA . A CA 102 1_555 G O HOH . A HOH 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc13 B O SER 20 B SER 20 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc14 B O LYS 23 B LYS 23 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc15 B O ASN 25 B ASN 25 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc16 B O ALA 28 B ALA 28 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc17 B OD1 ASP 59 B ASP 59 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc18 B OD1 ASN 61 B ASN 61 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc19 B OD1 ASP 63 B ASP 63 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc20 B O ALA 65 B ALA 65 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc21 B OE1 GLU 70 B GLU 70 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc22 B OE2 GLU 70 B GLU 70 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc23 E CA CA . B CA 101 1_555 H O HOH . B HOH 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc24 F CA CA . B CA 102 1_555 H O HOH . B HOH 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MR8 _atom_sites.fract_transf_matrix[1][1] 0.019048 _atom_sites.fract_transf_matrix[1][2] 0.010997 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021994 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007776 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 101 101 CA OC1 . D 2 CA A 1 102 102 CA OC1 . E 2 CA B 1 101 101 CA OC1 . F 2 CA B 1 102 102 CA OC1 . G 3 HOH A 1 103 8 HOH HOH . G 3 HOH A 2 104 9 HOH HOH . G 3 HOH A 3 105 17 HOH HOH . G 3 HOH A 4 106 18 HOH HOH . G 3 HOH A 5 107 21 HOH HOH . G 3 HOH A 6 108 23 HOH HOH . G 3 HOH A 7 109 25 HOH HOH . G 3 HOH A 8 110 27 HOH HOH . G 3 HOH A 9 111 36 HOH HOH . G 3 HOH A 10 112 38 HOH HOH . G 3 HOH A 11 113 39 HOH HOH . G 3 HOH A 12 114 42 HOH HOH . G 3 HOH A 13 115 44 HOH HOH . G 3 HOH A 14 116 47 HOH HOH . G 3 HOH A 15 117 49 HOH HOH . G 3 HOH A 16 118 53 HOH HOH . G 3 HOH A 17 119 55 HOH HOH . G 3 HOH A 18 120 58 HOH HOH . G 3 HOH A 19 121 63 HOH HOH . G 3 HOH A 20 122 64 HOH HOH . G 3 HOH A 21 123 65 HOH HOH . G 3 HOH A 22 124 66 HOH HOH . G 3 HOH A 23 125 67 HOH HOH . G 3 HOH A 24 126 69 HOH HOH . G 3 HOH A 25 127 70 HOH HOH . G 3 HOH A 26 128 71 HOH HOH . G 3 HOH A 27 129 73 HOH HOH . G 3 HOH A 28 130 79 HOH HOH . G 3 HOH A 29 131 83 HOH HOH . G 3 HOH A 30 132 84 HOH HOH . G 3 HOH A 31 133 88 HOH HOH . G 3 HOH A 32 134 89 HOH HOH . G 3 HOH A 33 135 93 HOH HOH . G 3 HOH A 34 136 94 HOH HOH . G 3 HOH A 35 137 96 HOH HOH . G 3 HOH A 36 138 99 HOH HOH . G 3 HOH A 37 139 101 HOH HOH . G 3 HOH A 38 140 101 HOH OC1 . G 3 HOH A 39 141 102 HOH OC1 . H 3 HOH B 1 103 1 HOH HOH . H 3 HOH B 2 104 3 HOH HOH . H 3 HOH B 3 105 4 HOH HOH . H 3 HOH B 4 106 6 HOH HOH . H 3 HOH B 5 107 7 HOH HOH . H 3 HOH B 6 108 11 HOH HOH . H 3 HOH B 7 109 12 HOH HOH . H 3 HOH B 8 110 13 HOH HOH . H 3 HOH B 9 111 14 HOH HOH . H 3 HOH B 10 112 15 HOH HOH . H 3 HOH B 11 113 19 HOH HOH . H 3 HOH B 12 114 20 HOH HOH . H 3 HOH B 13 115 22 HOH HOH . H 3 HOH B 14 116 24 HOH HOH . H 3 HOH B 15 117 26 HOH HOH . H 3 HOH B 16 118 28 HOH HOH . H 3 HOH B 17 119 29 HOH HOH . H 3 HOH B 18 120 30 HOH HOH . H 3 HOH B 19 121 31 HOH HOH . H 3 HOH B 20 122 32 HOH HOH . H 3 HOH B 21 123 33 HOH HOH . H 3 HOH B 22 124 34 HOH HOH . H 3 HOH B 23 125 35 HOH HOH . H 3 HOH B 24 126 37 HOH HOH . H 3 HOH B 25 127 40 HOH HOH . H 3 HOH B 26 128 41 HOH HOH . H 3 HOH B 27 129 43 HOH HOH . H 3 HOH B 28 130 45 HOH HOH . H 3 HOH B 29 131 46 HOH HOH . H 3 HOH B 30 132 48 HOH HOH . H 3 HOH B 31 133 50 HOH HOH . H 3 HOH B 32 134 51 HOH HOH . H 3 HOH B 33 135 52 HOH HOH . H 3 HOH B 34 136 54 HOH HOH . H 3 HOH B 35 137 56 HOH HOH . H 3 HOH B 36 138 57 HOH HOH . H 3 HOH B 37 139 59 HOH HOH . H 3 HOH B 38 140 60 HOH HOH . H 3 HOH B 39 141 61 HOH HOH . H 3 HOH B 40 142 62 HOH HOH . H 3 HOH B 41 143 68 HOH HOH . H 3 HOH B 42 144 72 HOH HOH . H 3 HOH B 43 145 74 HOH HOH . H 3 HOH B 44 146 75 HOH HOH . H 3 HOH B 45 147 76 HOH HOH . H 3 HOH B 46 148 77 HOH HOH . H 3 HOH B 47 149 78 HOH HOH . H 3 HOH B 48 150 80 HOH HOH . H 3 HOH B 49 151 81 HOH HOH . H 3 HOH B 50 152 82 HOH HOH . H 3 HOH B 51 153 85 HOH HOH . H 3 HOH B 52 154 86 HOH HOH . H 3 HOH B 53 155 87 HOH HOH . H 3 HOH B 54 156 90 HOH HOH . H 3 HOH B 55 157 91 HOH HOH . H 3 HOH B 56 158 92 HOH HOH . H 3 HOH B 57 159 95 HOH HOH . H 3 HOH B 58 160 97 HOH HOH . H 3 HOH B 59 161 98 HOH HOH . H 3 HOH B 60 162 100 HOH HOH . H 3 HOH B 61 163 102 HOH HOH . H 3 HOH B 62 164 103 HOH HOH . H 3 HOH B 63 165 101 HOH OC1 . H 3 HOH B 64 166 102 HOH OC1 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.134 _atom_site.Cartn_y 12.259 _atom_site.Cartn_z 57.529 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 396 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #