data_1MRD # _model_server_result.job_id dFobB9lAjGy9lipTErTjYw _model_server_result.datetime_utc '2024-11-24 14:38:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mrd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 1MRD # _exptl.entry_id 1MRD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MRD _cell.length_a 66.2 _cell.length_b 75.3 _cell.length_c 105.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MRD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf2 A SG CYS 139 L CYS 134 1_555 A SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 B SG CYS 143 H CYS 142 1_555 B SG CYS 198 H CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc1 A OD2 ASP 156 L ASP 151 1_555 C ZN ZN . L ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? metalc ? metalc2 A ND1 HIS 194 L HIS 189 1_555 C ZN ZN . L ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc3 C ZN ZN . L ZN 600 1_555 D N1 IMD . L IMD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.755 ? metalc ? metalc4 C ZN ZN . L ZN 600 1_555 B OD2 ASP 210 H ASP 220 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.771 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1MRD _atom_sites.fract_transf_matrix[1][1] 0.015106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01328 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN L 1 600 600 ZN ZN . D 4 IMD L 1 902 902 IMD IMD . E 5 IDP L 1 901 901 IDP IDP . F 6 HOH L 1 601 601 HOH HOH . F 6 HOH L 2 607 607 HOH HOH . F 6 HOH L 3 608 608 HOH HOH . F 6 HOH L 4 609 609 HOH HOH . F 6 HOH L 5 612 612 HOH HOH . F 6 HOH L 6 613 613 HOH HOH . F 6 HOH L 7 620 620 HOH HOH . F 6 HOH L 8 623 623 HOH HOH . F 6 HOH L 9 624 624 HOH HOH . F 6 HOH L 10 625 625 HOH HOH . F 6 HOH L 11 628 628 HOH HOH . F 6 HOH L 12 629 629 HOH HOH . F 6 HOH L 13 634 634 HOH HOH . F 6 HOH L 14 635 635 HOH HOH . F 6 HOH L 15 636 636 HOH HOH . F 6 HOH L 16 637 637 HOH HOH . F 6 HOH L 17 639 639 HOH HOH . F 6 HOH L 18 640 640 HOH HOH . F 6 HOH L 19 641 641 HOH HOH . F 6 HOH L 20 642 642 HOH HOH . F 6 HOH L 21 644 644 HOH HOH . F 6 HOH L 22 645 645 HOH HOH . F 6 HOH L 23 647 647 HOH HOH . F 6 HOH L 24 650 650 HOH HOH . F 6 HOH L 25 651 651 HOH HOH . F 6 HOH L 26 652 652 HOH HOH . F 6 HOH L 27 654 654 HOH HOH . F 6 HOH L 28 655 655 HOH HOH . F 6 HOH L 29 656 656 HOH HOH . F 6 HOH L 30 657 657 HOH HOH . F 6 HOH L 31 658 658 HOH HOH . F 6 HOH L 32 659 659 HOH HOH . F 6 HOH L 33 661 661 HOH HOH . F 6 HOH L 34 662 662 HOH HOH . F 6 HOH L 35 663 663 HOH HOH . F 6 HOH L 36 664 664 HOH HOH . F 6 HOH L 37 665 665 HOH HOH . F 6 HOH L 38 669 669 HOH HOH . F 6 HOH L 39 670 670 HOH HOH . F 6 HOH L 40 671 671 HOH HOH . F 6 HOH L 41 672 672 HOH HOH . F 6 HOH L 42 675 675 HOH HOH . F 6 HOH L 43 676 676 HOH HOH . F 6 HOH L 44 682 682 HOH HOH . F 6 HOH L 45 686 686 HOH HOH . F 6 HOH L 46 687 687 HOH HOH . F 6 HOH L 47 688 688 HOH HOH . F 6 HOH L 48 690 690 HOH HOH . F 6 HOH L 49 691 691 HOH HOH . F 6 HOH L 50 695 695 HOH HOH . F 6 HOH L 51 696 696 HOH HOH . F 6 HOH L 52 699 699 HOH HOH . F 6 HOH L 53 700 700 HOH HOH . F 6 HOH L 54 701 701 HOH HOH . F 6 HOH L 55 703 703 HOH HOH . G 6 HOH H 1 602 602 HOH HOH . G 6 HOH H 2 603 603 HOH HOH . G 6 HOH H 3 604 604 HOH HOH . G 6 HOH H 4 605 605 HOH HOH . G 6 HOH H 5 606 606 HOH HOH . G 6 HOH H 6 610 610 HOH HOH . G 6 HOH H 7 611 611 HOH HOH . G 6 HOH H 8 614 614 HOH HOH . G 6 HOH H 9 615 615 HOH HOH . G 6 HOH H 10 616 616 HOH HOH . G 6 HOH H 11 617 617 HOH HOH . G 6 HOH H 12 618 618 HOH HOH . G 6 HOH H 13 619 619 HOH HOH . G 6 HOH H 14 621 621 HOH HOH . G 6 HOH H 15 622 622 HOH HOH . G 6 HOH H 16 626 626 HOH HOH . G 6 HOH H 17 627 627 HOH HOH . G 6 HOH H 18 630 630 HOH HOH . G 6 HOH H 19 631 631 HOH HOH . G 6 HOH H 20 632 632 HOH HOH . G 6 HOH H 21 633 633 HOH HOH . G 6 HOH H 22 638 638 HOH HOH . G 6 HOH H 23 643 643 HOH HOH . G 6 HOH H 24 646 646 HOH HOH . G 6 HOH H 25 648 648 HOH HOH . G 6 HOH H 26 649 649 HOH HOH . G 6 HOH H 27 653 653 HOH HOH . G 6 HOH H 28 660 660 HOH HOH . G 6 HOH H 29 666 666 HOH HOH . G 6 HOH H 30 667 667 HOH HOH . G 6 HOH H 31 668 668 HOH HOH . G 6 HOH H 32 673 673 HOH HOH . G 6 HOH H 33 674 674 HOH HOH . G 6 HOH H 34 677 677 HOH HOH . G 6 HOH H 35 678 678 HOH HOH . G 6 HOH H 36 679 679 HOH HOH . G 6 HOH H 37 680 680 HOH HOH . G 6 HOH H 38 681 681 HOH HOH . G 6 HOH H 39 683 683 HOH HOH . G 6 HOH H 40 684 684 HOH HOH . G 6 HOH H 41 685 685 HOH HOH . G 6 HOH H 42 689 689 HOH HOH . G 6 HOH H 43 692 692 HOH HOH . G 6 HOH H 44 693 693 HOH HOH . G 6 HOH H 45 694 694 HOH HOH . G 6 HOH H 46 697 697 HOH HOH . G 6 HOH H 47 698 698 HOH HOH . G 6 HOH H 48 702 702 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 37.758 _atom_site.Cartn_y 51.671 _atom_site.Cartn_z 22.346 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 600 _atom_site.auth_asym_id L _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #