data_1MRL # _model_server_result.job_id 1MbF-XshDmK47GkLg3kAxA _model_server_result.datetime_utc '2024-11-24 17:00:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1mrl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 1MRL # _exptl.entry_id 1MRL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 690.847 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10-ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA-TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)-PENTAENE-2,8,14,23-TETRAONE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1MRL _cell.length_a 82.914 _cell.length_b 90.905 _cell.length_c 104.529 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MRL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C34 H50 N4 O9 S' _chem_comp.formula_weight 690.847 _chem_comp.id DOL _chem_comp.mon_nstd_flag . _chem_comp.name 5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10-ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA-TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)-PENTAENE-2,8,14,23-TETRAONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DALFOPRISTIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7 C6 DOL doub 83 n n C6 N5 DOL sing 84 n n C6 C8 DOL sing 85 n n N5 C4 DOL sing 86 n n N5 C1 DOL sing 87 n n C4 C3 DOL sing 88 n n C4 HC41 DOL sing 89 n n C4 HC42 DOL sing 90 n n C3 C2 DOL sing 91 n n C3 HC31 DOL sing 92 n n C3 HC3A DOL sing 93 n n C2 S39 DOL sing 94 n n C2 C1 DOL sing 95 n n C2 HC2 DOL sing 96 n n S39 O41 DOL doub 97 n n S39 O40 DOL doub 98 n n S39 C42 DOL sing 99 n n C42 C43 DOL sing 100 n n C42 H421 DOL sing 101 n n C42 H422 DOL sing 102 n n C43 N44 DOL sing 103 n n C43 H431 DOL sing 104 n n C43 H432 DOL sing 105 n n N44 C47 DOL sing 106 n n N44 C45 DOL sing 107 n n C47 C48 DOL sing 108 n n C47 H471 DOL sing 109 n n C47 H472 DOL sing 110 n n C48 H481 DOL sing 111 n n C48 H482 DOL sing 112 n n C48 H483 DOL sing 113 n n C45 C46 DOL sing 114 n n C45 H451 DOL sing 115 n n C45 H452 DOL sing 116 n n C46 H461 DOL sing 117 n n C46 H462 DOL sing 118 n n C46 H463 DOL sing 119 n n C1 C37 DOL sing 120 n n C1 HC1 DOL sing 121 n n C8 C12 DOL doub 122 n y C8 N9 DOL sing 123 n y C12 O11 DOL sing 124 n y C12 HC12 DOL sing 125 n n O11 C10 DOL sing 126 n y N9 C10 DOL doub 127 n y C10 C13 DOL sing 128 n n C13 C14 DOL sing 129 n n C13 H131 DOL sing 130 n n C13 H132 DOL sing 131 n n C14 O15 DOL doub 132 n n C14 C16 DOL sing 133 n n C16 C17 DOL sing 134 n n C16 H161 DOL sing 135 n n C16 H162 DOL sing 136 n n C17 O18 DOL sing 137 n n C17 C19 DOL sing 138 n n C17 HC17 DOL sing 139 n n O18 HO18 DOL sing 140 n n C19 C20 DOL doub 141 e n C19 HC19 DOL sing 142 n n C20 C21 DOL sing 143 n n C20 C22 DOL sing 144 n n C21 H211 DOL sing 145 n n C21 H212 DOL sing 146 n n C21 H213 DOL sing 147 n n C22 C23 DOL doub 148 e n C22 HC22 DOL sing 149 n n C23 C24 DOL sing 150 n n C23 HC23 DOL sing 151 n n C24 N25 DOL sing 152 n n C24 H241 DOL sing 153 n n C24 H242 DOL sing 154 n n N25 C26 DOL sing 155 n n N25 HN25 DOL sing 156 n n C26 O27 DOL doub 157 n n C26 C28 DOL sing 158 n n C28 C29 DOL doub 159 e n C28 HC28 DOL sing 160 n n C29 C30 DOL sing 161 n n C29 HC29 DOL sing 162 n n C30 C31 DOL sing 163 n n C30 C32 DOL sing 164 n n C30 HC30 DOL sing 165 n n C31 H311 DOL sing 166 n n C31 H312 DOL sing 167 n n C31 H313 DOL sing 168 n n C32 C33 DOL sing 169 n n C32 O36 DOL sing 170 n n C32 HC32 DOL sing 171 n n C33 C35 DOL sing 172 n n C33 C34 DOL sing 173 n n C33 HC33 DOL sing 174 n n C35 H351 DOL sing 175 n n C35 H352 DOL sing 176 n n C35 H353 DOL sing 177 n n C34 H341 DOL sing 178 n n C34 H342 DOL sing 179 n n C34 H343 DOL sing 180 n n O36 C37 DOL sing 181 n n C37 O38 DOL doub 182 n n # _atom_sites.entry_id 1MRL _atom_sites.fract_transf_matrix[1][1] 0.012061 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 DOL A 1 300 300 DOL DAL . E 2 DOL B 1 301 300 DOL DAL . F 2 DOL C 1 302 300 DOL DAL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7 DOL . . . D 2 26.083 52.829 56.969 1 53.88 ? O7 DOL 300 A 1 HETATM 2 C C6 DOL . . . D 2 26.563 54.094 56.641 1 53.88 ? C6 DOL 300 A 1 HETATM 3 N N5 DOL . . . D 2 25.973 55.29 57.251 1 53.88 ? N5 DOL 300 A 1 HETATM 4 C C4 DOL . . . D 2 26.812 56.357 56.701 1 53.88 ? C4 DOL 300 A 1 HETATM 5 C C3 DOL . . . D 2 27.918 56.533 57.747 1 53.88 ? C3 DOL 300 A 1 HETATM 6 C C2 DOL . . . D 2 27.433 55.805 58.989 1 53.88 ? C2 DOL 300 A 1 HETATM 7 S S39 DOL . . . D 2 27.772 56.812 60.414 1 53.88 ? S39 DOL 300 A 1 HETATM 8 O O41 DOL . . . D 2 27.144 58.429 60.101 1 53.88 ? O41 DOL 300 A 1 HETATM 9 O O40 DOL . . . D 2 27.021 56.111 61.845 1 53.88 ? O40 DOL 300 A 1 HETATM 10 C C42 DOL . . . D 2 29.542 56.857 60.636 1 53.88 ? C42 DOL 300 A 1 HETATM 11 C C43 DOL . . . D 2 30.153 57.887 59.694 1 53.88 ? C43 DOL 300 A 1 HETATM 12 N N44 DOL . . . D 2 30.684 58.893 60.598 1 53.88 ? N44 DOL 300 A 1 HETATM 13 C C47 DOL . . . D 2 32.114 59.185 60.604 1 53.88 ? C47 DOL 300 A 1 HETATM 14 C C48 DOL . . . D 2 32.474 60.082 59.437 1 53.88 ? C48 DOL 300 A 1 HETATM 15 C C45 DOL . . . D 2 29.772 59.579 61.505 1 53.88 ? C45 DOL 300 A 1 HETATM 16 C C46 DOL . . . D 2 30.182 61.023 61.691 1 53.88 ? C46 DOL 300 A 1 HETATM 17 C C1 DOL . . . D 2 25.961 55.749 58.657 1 53.88 ? C1 DOL 300 A 1 HETATM 18 C C8 DOL . . . D 2 27.685 54.413 55.689 1 53.88 ? C8 DOL 300 A 1 HETATM 19 C C12 DOL . . . D 2 28.525 55.685 55.503 1 53.88 ? C12 DOL 300 A 1 HETATM 20 O O11 DOL . . . D 2 29.114 55.576 54.192 1 53.88 ? O11 DOL 300 A 1 HETATM 21 N N9 DOL . . . D 2 27.692 53.657 54.493 1 53.88 ? N9 DOL 300 A 1 HETATM 22 C C10 DOL . . . D 2 28.603 54.359 53.644 1 53.88 ? C10 DOL 300 A 1 HETATM 23 C C13 DOL . . . D 2 28.839 53.738 52.294 1 53.88 ? C13 DOL 300 A 1 HETATM 24 C C14 DOL . . . D 2 27.572 52.884 52.277 1 53.88 ? C14 DOL 300 A 1 HETATM 25 O O15 DOL . . . D 2 27.457 51.828 53.236 1 53.88 ? O15 DOL 300 A 1 HETATM 26 C C16 DOL . . . D 2 26.385 53.145 51.355 1 53.88 ? C16 DOL 300 A 1 HETATM 27 C C17 DOL . . . D 2 25.164 52.379 51.872 1 53.88 ? C17 DOL 300 A 1 HETATM 28 O O18 DOL . . . D 2 24.235 52.16 50.808 1 53.88 ? O18 DOL 300 A 1 HETATM 29 C C19 DOL . . . D 2 24.49 53.194 52.967 1 53.88 ? C19 DOL 300 A 1 HETATM 30 C C20 DOL . . . D 2 23.54 52.404 53.863 1 53.88 ? C20 DOL 300 A 1 HETATM 31 C C21 DOL . . . D 2 23.289 50.917 53.641 1 53.88 ? C21 DOL 300 A 1 HETATM 32 C C22 DOL . . . D 2 22.577 53.237 54.694 1 53.88 ? C22 DOL 300 A 1 HETATM 33 C C23 DOL . . . D 2 21.504 52.431 55.407 1 53.88 ? C23 DOL 300 A 1 HETATM 34 C C24 DOL . . . D 2 20.683 53.448 56.18 1 53.88 ? C24 DOL 300 A 1 HETATM 35 N N25 DOL . . . D 2 21.634 54.21 56.955 1 53.88 ? N25 DOL 300 A 1 HETATM 36 C C26 DOL . . . D 2 21.259 54.86 58.186 1 53.88 ? C26 DOL 300 A 1 HETATM 37 O O27 DOL . . . D 2 19.889 54.805 58.578 1 53.88 ? O27 DOL 300 A 1 HETATM 38 C C28 DOL . . . D 2 22.071 56.056 58.632 1 53.88 ? C28 DOL 300 A 1 HETATM 39 C C29 DOL . . . D 2 21.875 56.253 60.124 1 53.88 ? C29 DOL 300 A 1 HETATM 40 C C30 DOL . . . D 2 22.701 57.46 60.531 1 53.88 ? C30 DOL 300 A 1 HETATM 41 C C31 DOL . . . D 2 21.908 58.252 61.571 1 53.88 ? C31 DOL 300 A 1 HETATM 42 C C32 DOL . . . D 2 24.169 57.168 60.926 1 53.88 ? C32 DOL 300 A 1 HETATM 43 C C33 DOL . . . D 2 24.47 57.618 62.363 1 53.88 ? C33 DOL 300 A 1 HETATM 44 C C35 DOL . . . D 2 24.988 59.052 62.45 1 53.88 ? C35 DOL 300 A 1 HETATM 45 C C34 DOL . . . D 2 23.289 57.402 63.306 1 53.88 ? C34 DOL 300 A 1 HETATM 46 O O36 DOL . . . D 2 24.58 55.786 60.875 1 53.88 ? O36 DOL 300 A 1 HETATM 47 C C37 DOL . . . D 2 24.946 55.139 59.636 1 53.88 ? C37 DOL 300 A 1 HETATM 48 O O38 DOL . . . D 2 24.304 53.898 59.32 1 53.88 ? O38 DOL 300 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 406 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #